RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 NEK8Q86SG6 692 aa9.17□□□□□ -0.94
VAPB-205ENST00000476395 TBC1D1Q86TI0 1168 aaPredicted RBP9.17□□□□□ -0.94
VAPB-205ENST00000476395 CCDC26Q8TAB7 109 aa9.17□□□□□ -0.94
VAPB-205ENST00000476395 CASKIN2Q8WXE0 1202 aa9.17□□□□□ -0.94
VAPB-205ENST00000476395 CAVIN3Q969G5 261 aa9.17□□□□□ -0.94
VAPB-205ENST00000476395 HVCN1Q96D96 273 aa9.17□□□□□ -0.94
VAPB-205ENST00000476395 ATP6V1G3Q96LB4 118 aa9.17□□□□□ -0.94
VAPB-205ENST00000476395 PACSIN1Q9BY11 444 aa9.17□□□□□ -0.94
VAPB-205ENST00000476395 IFIH1Q9BYX4 1025 aaKnown RBP9.17□□□□□ -0.94
VAPB-205ENST00000476395 BCAS3Q9H6U6 928 aa9.17□□□□□ -0.94
VAPB-205ENST00000476395 KANSL2Q9H9L4 492 aa9.17□□□□□ -0.94
VAPB-205ENST00000476395 NARFQ9UHQ1 456 aa9.17□□□□□ -0.94
VAPB-205ENST00000476395 TMEM59LQ9UK28 342 aa9.17□□□□□ -0.94
VAPB-205ENST00000476395 SMCHD1A6NHR9 2005 aa9.17□□□□□ -0.94
VAPB-205ENST00000476395 A0A1B0GVG6 124 aa9.17□□□□□ -0.94
VAPB-205ENST00000476395 CYLC1P35663 651 aaPredicted RBP9.17□□□□□ -0.94
VAPB-205ENST00000476395 NEDD1Q8NHV4 660 aa9.17□□□□□ -0.94
VAPB-205ENST00000476395 RAD54LQ92698 747 aa9.17□□□□□ -0.94
VAPB-205ENST00000476395 UBA5Q9GZZ9 404 aa9.17□□□□□ -0.94
VAPB-205ENST00000476395 ETAA1Q9NY74 926 aa9.17□□□□□ -0.94
VAPB-205ENST00000476395 G3BP2Q9UN86 482 aaKnown RBP9.17□□□□□ -0.94
VAPB-205ENST00000476395 ANKRD31Q8N7Z5 1873 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 ESYT2A0FGR8 921 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 KIF3CO14782 793 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 HGSO14964 777 aaPredicted RBP9.16□□□□□ -0.94
VAPB-205ENST00000476395 TSPY3P0CV98 308 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 TSPY8P0CW00 308 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 FLT3P36888 993 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 GABPAQ06546 454 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 NONOQ15233 471 aaKnown RBP eCLIP9.16□□□□□ -0.94
VAPB-205ENST00000476395 DNAAF5Q86Y56 855 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 GUF1Q8N442 669 aaKnown RBP9.16□□□□□ -0.94
VAPB-205ENST00000476395 AGAP11Q8TF27 550 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 INPP4AQ96PE3 977 aaPredicted RBP9.16□□□□□ -0.94
VAPB-205ENST00000476395 PAGR1Q9BTK6 254 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 KCTD10Q9H3F6 313 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 SPATS2LQ9NUQ6 558 aaKnown RBP9.16□□□□□ -0.94
VAPB-205ENST00000476395 AJAP1Q9UKB5 411 aaPredicted RBP9.16□□□□□ -0.94
VAPB-205ENST00000476395 GPR75-ASB3A0A0A6YYF3 556 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 MGRN1O60291 552 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 DIAPH2O60879 1101 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 PAX3P23760 479 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 ADCY2Q08462 1091 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 FAM133BQ5BKY9 247 aaKnown RBP9.16□□□□□ -0.94
VAPB-205ENST00000476395 ALS2CLQ60I27 953 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 EMBQ6PCB8 327 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 DYMQ7RTS9 669 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 KCNV2Q8TDN2 545 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 PIDD1Q9HB75 910 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 TRPC6Q9Y210 931 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 ZNF652Q9Y2D9 606 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 RPS6KL1Q9Y6S9 549 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 AFF2P51816 1311 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 BICDL2A1A5D9 508 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 GMNCA6NCL1 334 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 PYGLP06737 847 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 ABL2P42684 1182 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 PSMD2Q13200 908 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 MAN2A1Q16706 1144 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 EMC10Q5UCC4 262 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 KRT25Q7Z3Z0 450 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 TRIM58Q8NG06 486 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 RAPGEF5Q92565 580 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 DDX12PQ92771 950 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 COA7Q96BR5 231 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 KRT12Q99456 494 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 GANQ9H2C0 597 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.16□□□□□ -0.945e-10■■■□□ 16.6
VAPB-205ENST00000476395 STX8Q9UNK0 236 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 C10orf71Q711Q0 1435 aa9.16□□□□□ -0.94
VAPB-205ENST00000476395 PVALEFA0A1B0GWK0 134 aa9.15□□□□□ -0.94
VAPB-205ENST00000476395 F8W031 263 aaPredicted RBP9.15□□□□□ -0.94
VAPB-205ENST00000476395 TXKP42681 527 aa9.15□□□□□ -0.94
VAPB-205ENST00000476395 MTIF2P46199 727 aaKnown RBP9.15□□□□□ -0.94
VAPB-205ENST00000476395 NAPAP54920 295 aa9.15□□□□□ -0.94
VAPB-205ENST00000476395 KCNJ2P63252 427 aa9.15□□□□□ -0.94
VAPB-205ENST00000476395 RASSF7Q02833 373 aa9.15□□□□□ -0.94
VAPB-205ENST00000476395 ZC3H12AQ5D1E8 599 aaKnown RBP9.15□□□□□ -0.94
VAPB-205ENST00000476395 ARSHQ5FYA8 562 aa9.15□□□□□ -0.94
VAPB-205ENST00000476395 MSL1Q68DK7 614 aa9.15□□□□□ -0.94
VAPB-205ENST00000476395 CAPRIN2Q6IMN6 1127 aaKnown RBP9.15□□□□□ -0.94
VAPB-205ENST00000476395 FOXR2Q6PJQ5 311 aa9.15□□□□□ -0.94
VAPB-205ENST00000476395 C15orf52Q6ZUT6 534 aaKnown RBP9.15□□□□□ -0.94
VAPB-205ENST00000476395 LARP4BQ92615 738 aaKnown RBP9.15□□□□□ -0.94
VAPB-205ENST00000476395 CUL5Q93034 780 aa9.15□□□□□ -0.94
VAPB-205ENST00000476395 GOLPH3Q9H4A6 298 aa9.15□□□□□ -0.94
VAPB-205ENST00000476395 SLC12A6Q9UHW9 1150 aa9.15□□□□□ -0.94
VAPB-205ENST00000476395 AGAP1Q9UPQ3 857 aa9.15□□□□□ -0.94
VAPB-205ENST00000476395 NPHP3-ACAD11A0A0J9YXS1 232 aa9.15□□□□□ -0.95
VAPB-205ENST00000476395 KLRC1P26715 233 aa9.15□□□□□ -0.95
VAPB-205ENST00000476395 SMARCA1P28370 1054 aa9.15□□□□□ -0.95
VAPB-205ENST00000476395 TUBP50607 506 aa9.15□□□□□ -0.95
VAPB-205ENST00000476395 MARSP56192 900 aaKnown RBP9.15□□□□□ -0.95
VAPB-205ENST00000476395 PLCB4Q15147 1175 aa9.15□□□□□ -0.95
VAPB-205ENST00000476395 UAP1Q16222 522 aaPredicted RBP9.15□□□□□ -0.95
VAPB-205ENST00000476395 HYIQ5T013 277 aa9.15□□□□□ -0.95
VAPB-205ENST00000476395 WDR78Q5VTH9 848 aa9.15□□□□□ -0.95
VAPB-205ENST00000476395 RRAGAQ7L523 313 aa9.15□□□□□ -0.95
VAPB-205ENST00000476395 KIF2BQ8N4N8 673 aa9.15□□□□□ -0.95
VAPB-205ENST00000476395 C3orf20Q8ND61 904 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms