RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 XBP1P17861 261 aa18.38■□□□□ 0.53
COL1A1-205ENST00000476387 ACTR2P61160 394 aa18.38■□□□□ 0.53
COL1A1-205ENST00000476387 SETQ01105 290 aaPredicted RBP18.38■□□□□ 0.53
COL1A1-205ENST00000476387 ITGB3BPQ13352 177 aaPredicted RBP18.38■□□□□ 0.53
COL1A1-205ENST00000476387 PLPPR4Q7Z2D5 763 aa18.38■□□□□ 0.53
COL1A1-205ENST00000476387 C22orf23Q9BZE7 217 aa18.38■□□□□ 0.53
COL1A1-205ENST00000476387 PCDHA4Q9UN74 947 aa18.38■□□□□ 0.53
COL1A1-205ENST00000476387 WDR81Q562E7 1941 aa18.38■□□□□ 0.53
COL1A1-205ENST00000476387 XIRP2A4UGR9 3374 aa18.38■□□□□ 0.53
COL1A1-205ENST00000476387 BRWD1Q9NSI6 2320 aa18.37■□□□□ 0.53
COL1A1-205ENST00000476387 ADAMTS3O15072 1205 aa18.37■□□□□ 0.53
COL1A1-205ENST00000476387 SLC26A2P50443 739 aa18.37■□□□□ 0.53
COL1A1-205ENST00000476387 GALNT17Q6IS24 598 aa18.37■□□□□ 0.53
COL1A1-205ENST00000476387 CRYGNQ8WXF5 182 aa18.37■□□□□ 0.53
COL1A1-205ENST00000476387 AIFM3Q96NN9 605 aa18.37■□□□□ 0.53
COL1A1-205ENST00000476387 SAMD11Q96NU1 681 aa18.37■□□□□ 0.53
COL1A1-205ENST00000476387 YME1L1Q96TA2 773 aa18.37■□□□□ 0.53
COL1A1-205ENST00000476387 TCEAL9Q9UHQ7 104 aa18.37■□□□□ 0.53
COL1A1-205ENST00000476387 MTUS1Q9ULD2 1270 aa18.37■□□□□ 0.53
COL1A1-205ENST00000476387 FAM86B1E9PN63 330 aa18.36■□□□□ 0.53
COL1A1-205ENST00000476387 ATG7O95352 703 aa18.36■□□□□ 0.53
COL1A1-205ENST00000476387 FAM86B2P0C5J1 330 aa18.36■□□□□ 0.53
COL1A1-205ENST00000476387 GHRP10912 638 aa18.36■□□□□ 0.53
COL1A1-205ENST00000476387 BMP1P13497 986 aa18.36■□□□□ 0.53
COL1A1-205ENST00000476387 INSRRP14616 1297 aa18.36■□□□□ 0.53
COL1A1-205ENST00000476387 STAT5BP51692 787 aa18.36■□□□□ 0.53
COL1A1-205ENST00000476387 TFF2Q03403 129 aa18.36■□□□□ 0.53
COL1A1-205ENST00000476387 LPIN1Q14693 890 aa18.36■□□□□ 0.53
COL1A1-205ENST00000476387 BLIDQ8IZY5 108 aa18.36■□□□□ 0.53
COL1A1-205ENST00000476387 FBXO22Q8NEZ5 403 aa18.36■□□□□ 0.53
COL1A1-205ENST00000476387 DNAJB3Q8WWF6 145 aa18.36■□□□□ 0.53
COL1A1-205ENST00000476387 HLA-CQ95604 372 aa18.36■□□□□ 0.53
COL1A1-205ENST00000476387 GTF3C6Q969F1 213 aa18.36■□□□□ 0.53
COL1A1-205ENST00000476387 UHRF1Q96T88 793 aaPredicted RBP18.36■□□□□ 0.53
COL1A1-205ENST00000476387 TRPC6Q9Y210 931 aa18.36■□□□□ 0.53
COL1A1-205ENST00000476387 IGLV3-22A0A075B6J6 115 aa18.35■□□□□ 0.53
COL1A1-205ENST00000476387 IGKV6D-21A0A0A0MT36 114 aa18.35■□□□□ 0.53
COL1A1-205ENST00000476387 RBAK-RBAKDNI3L0D1 243 aa18.35■□□□□ 0.53
COL1A1-205ENST00000476387 IPO5O00410 1097 aaKnown RBP18.35■□□□□ 0.53
COL1A1-205ENST00000476387 IGBP1P78318 339 aa18.35■□□□□ 0.53
COL1A1-205ENST00000476387 MRPS6P82932 125 aaKnown RBP18.35■□□□□ 0.53
COL1A1-205ENST00000476387 PLCB4Q15147 1175 aa18.35■□□□□ 0.53
COL1A1-205ENST00000476387 ME3Q16798 604 aa18.35■□□□□ 0.53
COL1A1-205ENST00000476387 PRR16Q569H4 304 aa18.35■□□□□ 0.53
COL1A1-205ENST00000476387 FBXO47Q5MNV8 452 aa18.35■□□□□ 0.53
COL1A1-205ENST00000476387 IER5Q5VY09 327 aa18.35■□□□□ 0.53
COL1A1-205ENST00000476387 TSHZ1Q6ZSZ6 1077 aa18.35■□□□□ 0.53
COL1A1-205ENST00000476387 NECAB1Q8N987 351 aa18.35■□□□□ 0.53
COL1A1-205ENST00000476387 DAGLBQ8NCG7 672 aa18.35■□□□□ 0.53
COL1A1-205ENST00000476387 WASF1Q92558 559 aa18.35■□□□□ 0.53
COL1A1-205ENST00000476387 C17orf80Q9BSJ5 609 aa18.35■□□□□ 0.53
COL1A1-205ENST00000476387 ZNF577Q9BSK1 485 aa18.35■□□□□ 0.53
COL1A1-205ENST00000476387 ORC3Q9UBD5 711 aaPredicted RBP18.35■□□□□ 0.53
COL1A1-205ENST00000476387 PCDHA2Q9Y5H9 948 aa18.35■□□□□ 0.53
COL1A1-205ENST00000476387 CDY2AQ9Y6F7 541 aa18.35■□□□□ 0.53
COL1A1-205ENST00000476387 SQORQ9Y6N5 450 aa18.35■□□□□ 0.53
COL1A1-205ENST00000476387 POTEB3A0JP26 581 aa18.34■□□□□ 0.53
COL1A1-205ENST00000476387 DDX39AO00148 427 aaKnown RBP18.34■□□□□ 0.53
COL1A1-205ENST00000476387 UPP2O95045 317 aa18.34■□□□□ 0.53
COL1A1-205ENST00000476387 LARGE1O95461 756 aa18.34■□□□□ 0.53
COL1A1-205ENST00000476387 POTEBQ6S5H4 581 aa18.34■□□□□ 0.53
COL1A1-205ENST00000476387 M0QZ92 97 aa18.33■□□□□ 0.52
COL1A1-205ENST00000476387 CCNE2O96020 404 aa18.33■□□□□ 0.52
COL1A1-205ENST00000476387 CIITAP33076 1130 aa18.33■□□□□ 0.52
COL1A1-205ENST00000476387 USP11P51784 963 aa18.33■□□□□ 0.52
COL1A1-205ENST00000476387 EPC2Q52LR7 807 aa18.33■□□□□ 0.52
COL1A1-205ENST00000476387 FAM160B1Q5W0V3 765 aa18.33■□□□□ 0.52
COL1A1-205ENST00000476387 ABHD15Q6UXT9 468 aa18.33■□□□□ 0.52
COL1A1-205ENST00000476387 FAM43BQ6ZT52 329 aaPredicted RBP18.33■□□□□ 0.52
COL1A1-205ENST00000476387 TBCKQ8TEA7 893 aa18.33■□□□□ 0.52
COL1A1-205ENST00000476387 FAM49AQ9H0Q0 323 aaPredicted RBP18.33■□□□□ 0.52
COL1A1-205ENST00000476387 UPF2Q9HAU5 1272 aaKnown RBP18.33■□□□□ 0.52
COL1A1-205ENST00000476387 TBC1D22BQ9NU19 505 aa18.33■□□□□ 0.52
COL1A1-205ENST00000476387 KCNJ14Q9UNX9 436 aa18.33■□□□□ 0.52
COL1A1-205ENST00000476387 BACH1O14867 736 aa18.32■□□□□ 0.52
COL1A1-205ENST00000476387 DHX15O43143 795 aaKnown RBP18.32■□□□□ 0.52
COL1A1-205ENST00000476387 HBP1O60381 514 aa18.32■□□□□ 0.52
COL1A1-205ENST00000476387 CTDNEP1O95476 244 aa18.32■□□□□ 0.52
COL1A1-205ENST00000476387 KCNQ1P51787 676 aa18.32■□□□□ 0.52
COL1A1-205ENST00000476387 NONOQ15233 471 aaKnown RBP eCLIP18.32■□□□□ 0.52
COL1A1-205ENST00000476387 PTPROQ16827 1216 aa18.32■□□□□ 0.52
COL1A1-205ENST00000476387 KRT25Q7Z3Z0 450 aa18.32■□□□□ 0.52
COL1A1-205ENST00000476387 NME8Q8N427 588 aa18.32■□□□□ 0.52
COL1A1-205ENST00000476387 MRPL38Q96DV4 380 aaKnown RBP18.32■□□□□ 0.52
COL1A1-205ENST00000476387 UIMC1Q96RL1 719 aa18.32■□□□□ 0.52
COL1A1-205ENST00000476387 PHF20Q9BVI0 1012 aa18.32■□□□□ 0.52
COL1A1-205ENST00000476387 TRPV2Q9Y5S1 764 aa18.32■□□□□ 0.52
COL1A1-205ENST00000476387 KDM3AQ9Y4C1 1321 aa18.31■□□□□ 0.52
COL1A1-205ENST00000476387 CCDC194A0A1B0GVG4 234 aa18.31■□□□□ 0.52
COL1A1-205ENST00000476387 SMIM35A0A1B0GVV1 85 aa18.31■□□□□ 0.52
COL1A1-205ENST00000476387 H3BNC9 293 aa18.31■□□□□ 0.52
COL1A1-205ENST00000476387 ENPP3O14638 875 aa18.31■□□□□ 0.52
COL1A1-205ENST00000476387 KRT76Q01546 638 aa18.31■□□□□ 0.52
COL1A1-205ENST00000476387 NPY5RQ15761 445 aa18.31■□□□□ 0.52
COL1A1-205ENST00000476387 MIS18BP1Q6P0N0 1132 aa18.31■□□□□ 0.52
COL1A1-205ENST00000476387 MTHFD1LQ6UB35 978 aa18.31■□□□□ 0.52
COL1A1-205ENST00000476387 TMEM192Q8IY95 271 aa18.31■□□□□ 0.52
COL1A1-205ENST00000476387 ATP8B4Q8TF62 1192 aa18.31■□□□□ 0.52
COL1A1-205ENST00000476387 ZBTB10Q96DT7 871 aa18.31■□□□□ 0.52
COL1A1-205ENST00000476387 FTHL17Q9BXU8 183 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms