RNA–Protein interactions for RNA: ENST00000476234.5

EXOSC1-208, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-208ENST00000476234 NFXL1Q6ZNB6 911 aa12.71□□□□□ -0.37
EXOSC1-208ENST00000476234 TSHZ1Q6ZSZ6 1077 aa12.71□□□□□ -0.37
EXOSC1-208ENST00000476234 RTN4RL1Q86UN2 441 aaPredicted RBP12.71□□□□□ -0.37
EXOSC1-208ENST00000476234 SGMS1Q86VZ5 419 aa12.71□□□□□ -0.37
EXOSC1-208ENST00000476234 CMTR2Q8IYT2 770 aaKnown RBP12.71□□□□□ -0.37
EXOSC1-208ENST00000476234 CCDC82Q8N4S0 544 aa12.71□□□□□ -0.37
EXOSC1-208ENST00000476234 SPPL3Q8TCT6 385 aa12.71□□□□□ -0.37
EXOSC1-208ENST00000476234 LINC01599Q8WXQ3 324 aa12.71□□□□□ -0.37
EXOSC1-208ENST00000476234 FAM217BQ9NTX9 383 aaPredicted RBP12.71□□□□□ -0.37
EXOSC1-208ENST00000476234 MRPL42Q9Y6G3 142 aaKnown RBP12.71□□□□□ -0.37
EXOSC1-208ENST00000476234 SQORQ9Y6N5 450 aa12.71□□□□□ -0.37
EXOSC1-208ENST00000476234 TMEM221A6NGB7 291 aa12.7□□□□□ -0.38
EXOSC1-208ENST00000476234 CCDC69A6NI79 296 aa12.7□□□□□ -0.38
EXOSC1-208ENST00000476234 M0R296 226 aa12.7□□□□□ -0.38
EXOSC1-208ENST00000476234 PIK3CDO00329 1044 aa12.7□□□□□ -0.38
EXOSC1-208ENST00000476234 CDC45O75419 566 aa12.7□□□□□ -0.38
EXOSC1-208ENST00000476234 ITGB1P05556 798 aa12.7□□□□□ -0.38
EXOSC1-208ENST00000476234 SMARCA1P28370 1054 aa12.7□□□□□ -0.38
EXOSC1-208ENST00000476234 ZXDAP98168 799 aa12.7□□□□□ -0.38
EXOSC1-208ENST00000476234 TCF15Q12870 199 aa12.7□□□□□ -0.38
EXOSC1-208ENST00000476234 TYW1BQ6NUM6 668 aa12.7□□□□□ -0.38
EXOSC1-208ENST00000476234 TMTC3Q6ZXV5 915 aa12.7□□□□□ -0.38
EXOSC1-208ENST00000476234 ADGRD2Q7Z7M1 963 aa12.7□□□□□ -0.38
EXOSC1-208ENST00000476234 RSPH3Q86UC2 560 aa12.7□□□□□ -0.38
EXOSC1-208ENST00000476234 FANCBQ8NB91 859 aa12.7□□□□□ -0.38
EXOSC1-208ENST00000476234 GIMAP8Q8ND71 665 aaPredicted RBP12.7□□□□□ -0.38
EXOSC1-208ENST00000476234 CTCFLQ8NI51 663 aaPredicted RBP12.7□□□□□ -0.38
EXOSC1-208ENST00000476234 KCNB2Q92953 911 aa12.7□□□□□ -0.38
EXOSC1-208ENST00000476234 PPP2R3CQ969Q6 453 aa12.7□□□□□ -0.38
EXOSC1-208ENST00000476234 PBXIP1Q96AQ6 731 aa12.7□□□□□ -0.38
EXOSC1-208ENST00000476234 NEK1Q96PY6 1258 aa12.7□□□□□ -0.38
EXOSC1-208ENST00000476234 IGFLR1Q9H665 355 aa12.7□□□□□ -0.38
EXOSC1-208ENST00000476234 AGO3Q9H9G7 860 aaKnown RBP12.7□□□□□ -0.38
EXOSC1-208ENST00000476234 RTEL1Q9NZ71 1219 aa12.7□□□□□ -0.38
EXOSC1-208ENST00000476234 GSTTP1A0A1W2PQM5 241 aa12.69□□□□□ -0.38
EXOSC1-208ENST00000476234 ST18O60284 1047 aa12.69□□□□□ -0.38
EXOSC1-208ENST00000476234 GLP2RO95838 553 aa12.69□□□□□ -0.38
EXOSC1-208ENST00000476234 RPLP2P05387 115 aaKnown RBP12.69□□□□□ -0.38
EXOSC1-208ENST00000476234 KCNA2P16389 499 aa12.69□□□□□ -0.38
EXOSC1-208ENST00000476234 TCF7P36402 384 aaPredicted RBP12.69□□□□□ -0.38
EXOSC1-208ENST00000476234 NDUFV1P49821 464 aa12.69□□□□□ -0.38
EXOSC1-208ENST00000476234 PPFIA1Q13136 1202 aa12.69□□□□□ -0.38
EXOSC1-208ENST00000476234 GRIK4Q16099 956 aa12.69□□□□□ -0.38
EXOSC1-208ENST00000476234 APOA5Q6Q788 366 aa12.69□□□□□ -0.38
EXOSC1-208ENST00000476234 MICU3Q86XE3 530 aa12.69□□□□□ -0.38
EXOSC1-208ENST00000476234 TMTC2Q8N394 836 aa12.69□□□□□ -0.38
EXOSC1-208ENST00000476234 FBXL6Q8N531 539 aa12.69□□□□□ -0.38
EXOSC1-208ENST00000476234 DNAJB3Q8WWF6 145 aa12.69□□□□□ -0.38
EXOSC1-208ENST00000476234 RRP36Q96EU6 259 aaKnown RBP12.69□□□□□ -0.38
EXOSC1-208ENST00000476234 ERAP1Q9NZ08 941 aa12.69□□□□□ -0.38
EXOSC1-208ENST00000476234 TUBE1Q9UJT0 475 aa12.69□□□□□ -0.38
EXOSC1-208ENST00000476234 CDY2AQ9Y6F7 541 aa12.69□□□□□ -0.38
EXOSC1-208ENST00000476234 KMT2EQ8IZD2 1858 aa12.69□□□□□ -0.38
EXOSC1-208ENST00000476234 KIAA1671Q9BY89 1806 aa12.69□□□□□ -0.38
EXOSC1-208ENST00000476234 CNTNAP5Q8WYK1 1306 aa12.68□□□□□ -0.38
EXOSC1-208ENST00000476234 ADAMTS3O15072 1205 aa12.68□□□□□ -0.38
EXOSC1-208ENST00000476234 ATP9AO75110 1047 aa12.68□□□□□ -0.38
EXOSC1-208ENST00000476234 CDC27P30260 824 aa12.68□□□□□ -0.38
EXOSC1-208ENST00000476234 KIF5BP33176 963 aa12.68□□□□□ -0.38
EXOSC1-208ENST00000476234 MRPS6P82932 125 aaKnown RBP12.68□□□□□ -0.38
EXOSC1-208ENST00000476234 UBE2SQ16763 222 aa12.68□□□□□ -0.38
EXOSC1-208ENST00000476234 POTEGQ6S5H5 508 aa12.68□□□□□ -0.38
EXOSC1-208ENST00000476234 FAM43BQ6ZT52 329 aaPredicted RBP12.68□□□□□ -0.38
EXOSC1-208ENST00000476234 DHX32Q7L7V1 743 aaKnown RBP12.68□□□□□ -0.38
EXOSC1-208ENST00000476234 NLRX1Q86UT6 975 aa12.68□□□□□ -0.38
EXOSC1-208ENST00000476234 NPAS4Q8IUM7 802 aa12.68□□□□□ -0.38
EXOSC1-208ENST00000476234 KLHL23Q8NBE8 558 aa12.68□□□□□ -0.38
EXOSC1-208ENST00000476234 ATP8B4Q8TF62 1192 aa12.68□□□□□ -0.38
EXOSC1-208ENST00000476234 SUSD6Q92537 303 aa12.68□□□□□ -0.38
EXOSC1-208ENST00000476234 GPRASP2Q96D09 838 aa12.68□□□□□ -0.38
EXOSC1-208ENST00000476234 FTHL17Q9BXU8 183 aa12.68□□□□□ -0.38
EXOSC1-208ENST00000476234 USP15Q9Y4E8 981 aaPredicted RBP12.68□□□□□ -0.38
EXOSC1-208ENST00000476234 SLC12A7Q9Y666 1083 aa12.68□□□□□ -0.38
EXOSC1-208ENST00000476234 USP34Q70CQ2 3546 aa12.67□□□□□ -0.38
EXOSC1-208ENST00000476234 ATF7P17544 494 aaPredicted RBP12.67□□□□□ -0.38
EXOSC1-208ENST00000476234 ITGB5P18084 799 aa12.67□□□□□ -0.38
EXOSC1-208ENST00000476234 CD52P31358 61 aa12.67□□□□□ -0.38
EXOSC1-208ENST00000476234 SP4Q02446 784 aa12.67□□□□□ -0.38
EXOSC1-208ENST00000476234 SIGLEC14Q08ET2 396 aa12.67□□□□□ -0.38
EXOSC1-208ENST00000476234 POF1BQ8WVV4 589 aa12.67□□□□□ -0.38
EXOSC1-208ENST00000476234 SEPT1Q8WYJ6 367 aa12.67□□□□□ -0.38
EXOSC1-208ENST00000476234 ASIC4Q96FT7 647 aa12.67□□□□□ -0.38
EXOSC1-208ENST00000476234 CDHR1Q96JP9 859 aa12.67□□□□□ -0.38
EXOSC1-208ENST00000476234 LZTS2Q9BRK4 669 aa12.67□□□□□ -0.38
EXOSC1-208ENST00000476234 PHF7Q9BWX1 381 aaPredicted RBP12.67□□□□□ -0.38
EXOSC1-208ENST00000476234 SNX14Q9Y5W7 946 aa12.67□□□□□ -0.38
EXOSC1-208ENST00000476234 KAT6AQ92794 2004 aa12.67□□□□□ -0.38
EXOSC1-208ENST00000476234 IGSF9BQ9UPX0 1349 aa12.66□□□□□ -0.38
EXOSC1-208ENST00000476234 KDM3AQ9Y4C1 1321 aa12.66□□□□□ -0.38
EXOSC1-208ENST00000476234 RRN3P2A6NIE6 340 aa12.66□□□□□ -0.38
EXOSC1-208ENST00000476234 STAG3L1P0CL83 205 aa12.66□□□□□ -0.38
EXOSC1-208ENST00000476234 CALM1P0DP23 149 aa12.66□□□□□ -0.38
EXOSC1-208ENST00000476234 CALM2P0DP24 149 aa12.66□□□□□ -0.38
EXOSC1-208ENST00000476234 CALM3P0DP25 149 aa12.66□□□□□ -0.38
EXOSC1-208ENST00000476234 HSPA4P34932 840 aa12.66□□□□□ -0.38
EXOSC1-208ENST00000476234 NRIP1P48552 1158 aa12.66□□□□□ -0.38
EXOSC1-208ENST00000476234 GNAQP50148 359 aa12.66□□□□□ -0.38
EXOSC1-208ENST00000476234 UBE3AQ05086 875 aa12.66□□□□□ -0.38
EXOSC1-208ENST00000476234 KCNC3Q14003 757 aa12.66□□□□□ -0.38
EXOSC1-208ENST00000476234 IER5Q5VY09 327 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms