RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 FAM43BQ6ZT52 329 aaPredicted RBP12.37□□□□□ -0.43
CDRT1-205ENST00000475944 NME8Q8N427 588 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 ZNF713Q8N859 430 aaPredicted RBP12.37□□□□□ -0.43
CDRT1-205ENST00000475944 LINC01599Q8WXQ3 324 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 ZBTB10Q96DT7 871 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 ALG13Q9NP73 1137 aaKnown RBP12.37□□□□□ -0.43
CDRT1-205ENST00000475944 RIC8AQ9NPQ8 531 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 ANO2Q9NQ90 1003 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 PADI3Q9ULW8 664 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 PLAGL2Q9UPG8 496 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 ATG2AQ2TAZ0 1938 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 CNTNAP5Q8WYK1 1306 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 KDM3AQ9Y4C1 1321 aa12.37□□□□□ -0.43
CDRT1-205ENST00000475944 MBTPS2O43462 519 aa12.36□□□□□ -0.43
CDRT1-205ENST00000475944 CSPG5O95196 566 aa12.36□□□□□ -0.43
CDRT1-205ENST00000475944 SCG2P13521 617 aa12.36□□□□□ -0.43
CDRT1-205ENST00000475944 ADCY7P51828 1080 aa12.36□□□□□ -0.43
CDRT1-205ENST00000475944 KRT76Q01546 638 aa12.36□□□□□ -0.43
CDRT1-205ENST00000475944 TMEM62Q0P6H9 643 aa12.36□□□□□ -0.43
CDRT1-205ENST00000475944 AP3B2Q13367 1082 aa12.36□□□□□ -0.43
CDRT1-205ENST00000475944 SMAD4Q13485 552 aaKnown RBP12.36□□□□□ -0.43
CDRT1-205ENST00000475944 CEP55Q53EZ4 464 aa12.36□□□□□ -0.43
CDRT1-205ENST00000475944 RTN4RL1Q86UN2 441 aaPredicted RBP12.36□□□□□ -0.43
CDRT1-205ENST00000475944 TRAPPC12Q8WVT3 735 aa12.36□□□□□ -0.43
CDRT1-205ENST00000475944 ANO3Q9BYT9 981 aa12.36□□□□□ -0.43
CDRT1-205ENST00000475944 CELF4Q9BZC1 486 aaKnown RBP12.36□□□□□ -0.43
CDRT1-205ENST00000475944 IGFLR1Q9H665 355 aa12.36□□□□□ -0.43
CDRT1-205ENST00000475944 RNF216Q9NWF9 866 aaPredicted RBP12.36□□□□□ -0.43
CDRT1-205ENST00000475944 LRFN2Q9ULH4 789 aa12.36□□□□□ -0.43
CDRT1-205ENST00000475944 MRPL42Q9Y6G3 142 aaKnown RBP12.36□□□□□ -0.43
CDRT1-205ENST00000475944 HBP1O60381 514 aa12.35□□□□□ -0.43
CDRT1-205ENST00000475944 TBX10O75333 385 aa12.35□□□□□ -0.43
CDRT1-205ENST00000475944 ATG7O95352 703 aa12.35□□□□□ -0.43
CDRT1-205ENST00000475944 ARP10275 920 aa12.35□□□□□ -0.43
CDRT1-205ENST00000475944 IRS1P35568 1242 aa12.35□□□□□ -0.43
CDRT1-205ENST00000475944 ZNF76P36508 570 aa12.35□□□□□ -0.43
CDRT1-205ENST00000475944 SREBF1P36956 1147 aa12.35□□□□□ -0.43
CDRT1-205ENST00000475944 NDUFV1P49821 464 aa12.35□□□□□ -0.43
CDRT1-205ENST00000475944 IRX6P78412 446 aaPredicted RBP12.35□□□□□ -0.43
CDRT1-205ENST00000475944 DLX2Q07687 328 aaPredicted RBP12.35□□□□□ -0.43
CDRT1-205ENST00000475944 CLUL1Q15846 466 aa12.35□□□□□ -0.43
CDRT1-205ENST00000475944 RTN1Q16799 776 aa12.35□□□□□ -0.43
CDRT1-205ENST00000475944 PAN2Q504Q3 1202 aaKnown RBP12.35□□□□□ -0.43
CDRT1-205ENST00000475944 ODR4Q5SWX8 454 aa12.35□□□□□ -0.43
CDRT1-205ENST00000475944 FAM160B1Q5W0V3 765 aa12.35□□□□□ -0.43
CDRT1-205ENST00000475944 MTHFD1LQ6UB35 978 aa12.35□□□□□ -0.43
CDRT1-205ENST00000475944 CRIPAKQ8N1N5 446 aa12.35□□□□□ -0.43
CDRT1-205ENST00000475944 CYP2W1Q8TAV3 490 aa12.35□□□□□ -0.43
CDRT1-205ENST00000475944 PGBD1Q96JS3 809 aa12.35□□□□□ -0.43
CDRT1-205ENST00000475944 GLT8D2Q9H1C3 349 aa12.35□□□□□ -0.43
CDRT1-205ENST00000475944 AGO4Q9HCK5 861 aaKnown RBP12.35□□□□□ -0.43
CDRT1-205ENST00000475944 CD207Q9UJ71 328 aa12.35□□□□□ -0.43
CDRT1-205ENST00000475944 COL1A2P08123 1366 aa12.34□□□□□ -0.43
CDRT1-205ENST00000475944 SMCO2A6NFE2 343 aa12.34□□□□□ -0.43
CDRT1-205ENST00000475944 MEIS1O00470 390 aa12.34□□□□□ -0.43
CDRT1-205ENST00000475944 BACH1O14867 736 aa12.34□□□□□ -0.43
CDRT1-205ENST00000475944 LINC01565O15544 149 aa12.34□□□□□ -0.43
CDRT1-205ENST00000475944 ZBTB43O43298 467 aa12.34□□□□□ -0.43
CDRT1-205ENST00000475944 ITGB1P05556 798 aa12.34□□□□□ -0.43
CDRT1-205ENST00000475944 GTF2F1P35269 517 aaKnown RBP eCLIP12.34□□□□□ -0.43
CDRT1-205ENST00000475944 SARSP49591 514 aaKnown RBP12.34□□□□□ -0.43
CDRT1-205ENST00000475944 ITGB3BPQ13352 177 aaPredicted RBP12.34□□□□□ -0.43
CDRT1-205ENST00000475944 ADAM15Q13444 863 aa12.34□□□□□ -0.43
CDRT1-205ENST00000475944 CAMK1Q14012 370 aa12.34□□□□□ -0.43
CDRT1-205ENST00000475944 TYW1BQ6NUM6 668 aa12.34□□□□□ -0.43
CDRT1-205ENST00000475944 NIPA1Q7RTP0 329 aa12.34□□□□□ -0.43
CDRT1-205ENST00000475944 KLHL23Q8NBE8 558 aa12.34□□□□□ -0.43
CDRT1-205ENST00000475944 SPPL3Q8TCT6 385 aa12.34□□□□□ -0.43
CDRT1-205ENST00000475944 POF1BQ8WVV4 589 aa12.34□□□□□ -0.43
CDRT1-205ENST00000475944 NEK1Q96PY6 1258 aa12.34□□□□□ -0.43
CDRT1-205ENST00000475944 KCNH6Q9H252 994 aa12.34□□□□□ -0.43
CDRT1-205ENST00000475944 BARHL2Q9NY43 387 aa12.34□□□□□ -0.43
CDRT1-205ENST00000475944 GINS2Q9Y248 185 aa12.34□□□□□ -0.43
CDRT1-205ENST00000475944 V9GY48 417 aaPredicted RBP12.34□□□□□ -0.43
CDRT1-205ENST00000475944 KIAA1671Q9BY89 1806 aa12.33□□□□□ -0.44
CDRT1-205ENST00000475944 IGKV6D-21A0A0A0MT36 114 aa12.33□□□□□ -0.44
CDRT1-205ENST00000475944 GOLGA8AA7E2F4 631 aa12.33□□□□□ -0.44
CDRT1-205ENST00000475944 GOLGA8BA8MQT2 603 aa12.33□□□□□ -0.44
CDRT1-205ENST00000475944 DDX39AO00148 427 aaKnown RBP12.33□□□□□ -0.44
CDRT1-205ENST00000475944 STXBP3O00186 592 aa12.33□□□□□ -0.44
CDRT1-205ENST00000475944 RPS6KA5O75582 802 aa12.33□□□□□ -0.44
CDRT1-205ENST00000475944 DNAJB1P25685 340 aa12.33□□□□□ -0.44
CDRT1-205ENST00000475944 KLRC1P26715 233 aa12.33□□□□□ -0.44
CDRT1-205ENST00000475944 CLK2P49760 499 aaKnown RBP12.33□□□□□ -0.44
CDRT1-205ENST00000475944 FUT2Q10981 343 aa12.33□□□□□ -0.44
CDRT1-205ENST00000475944 NFX1Q12986 1120 aaKnown RBP12.33□□□□□ -0.44
CDRT1-205ENST00000475944 PDXDC2PQ6P474 469 aa12.33□□□□□ -0.44
CDRT1-205ENST00000475944 ABHD15Q6UXT9 468 aa12.33□□□□□ -0.44
CDRT1-205ENST00000475944 EFHBQ8N7U6 833 aa12.33□□□□□ -0.44
CDRT1-205ENST00000475944 ATP8B4Q8TF62 1192 aa12.33□□□□□ -0.44
CDRT1-205ENST00000475944 MSLNLQ96KJ4 702 aa12.33□□□□□ -0.44
CDRT1-205ENST00000475944 AAASQ9NRG9 546 aa12.33□□□□□ -0.44
CDRT1-205ENST00000475944 C1orf112Q9NSG2 853 aa12.33□□□□□ -0.44
CDRT1-205ENST00000475944 PCDHB7Q9Y5E2 793 aa12.33□□□□□ -0.44
CDRT1-205ENST00000475944 FSD2A1L4K1 749 aa12.32□□□□□ -0.44
CDRT1-205ENST00000475944 DENND3A2RUS2 1198 aa12.32□□□□□ -0.44
CDRT1-205ENST00000475944 GPR182O15218 404 aa12.32□□□□□ -0.44
CDRT1-205ENST00000475944 EYA4O95677 639 aa12.32□□□□□ -0.44
CDRT1-205ENST00000475944 IBSPP21815 317 aaPredicted RBP12.32□□□□□ -0.44
CDRT1-205ENST00000475944 RCAN1P53805 252 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms