RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 ASB15Q8WXK1 588 aa7.87□□□□□ -1.15
TM9SF3-204ENST00000475401 L2HGDHQ9H9P8 463 aa7.87□□□□□ -1.15
TM9SF3-204ENST00000475401 ZFP69BQ9UJL9 534 aa7.87□□□□□ -1.15
TM9SF3-204ENST00000475401 ZEB2O60315 1214 aa7.86□□□□□ -1.15
TM9SF3-204ENST00000475401 SLC9A1P19634 815 aa7.86□□□□□ -1.15
TM9SF3-204ENST00000475401 RPL13P26373 211 aaKnown RBP7.86□□□□□ -1.15
TM9SF3-204ENST00000475401 CFPP27918 469 aa7.86□□□□□ -1.15
TM9SF3-204ENST00000475401 LSSP48449 732 aa7.86□□□□□ -1.15
TM9SF3-204ENST00000475401 SARSP49591 514 aaKnown RBP7.86□□□□□ -1.15
TM9SF3-204ENST00000475401 CATSPEREQ5SY80 951 aa7.86□□□□□ -1.15
TM9SF3-204ENST00000475401 IFT22Q9H7X7 185 aa7.86□□□□□ -1.15
TM9SF3-204ENST00000475401 GOLGA2P5Q9HBQ8 144 aa7.86□□□□□ -1.15
TM9SF3-204ENST00000475401 GALNT8Q9NY28 637 aa7.86□□□□□ -1.15
TM9SF3-204ENST00000475401 PRAMEF22A3QJZ6 481 aa7.85□□□□□ -1.15
TM9SF3-204ENST00000475401 SH3D21A4FU49 640 aa7.85□□□□□ -1.15
TM9SF3-204ENST00000475401 BRINP1O60477 761 aa7.85□□□□□ -1.15
TM9SF3-204ENST00000475401 FKBP9O95302 570 aa7.85□□□□□ -1.15
TM9SF3-204ENST00000475401 CHGBP05060 677 aa7.85□□□□□ -1.15
TM9SF3-204ENST00000475401 NFKB2Q00653 900 aa7.85□□□□□ -1.15
TM9SF3-204ENST00000475401 ADCY1Q08828 1119 aa7.85□□□□□ -1.15
TM9SF3-204ENST00000475401 SMAD2Q15796 467 aaKnown RBP7.85□□□□□ -1.15
TM9SF3-204ENST00000475401 TRMT10BQ6PF06 316 aaKnown RBP7.85□□□□□ -1.15
TM9SF3-204ENST00000475401 ZNF662Q6ZS27 426 aa7.85□□□□□ -1.15
TM9SF3-204ENST00000475401 FKBP9P1Q75LS8 142 aa7.85□□□□□ -1.15
TM9SF3-204ENST00000475401 ZCRB1Q8TBF4 217 aaKnown RBP7.85□□□□□ -1.15
TM9SF3-204ENST00000475401 ZNF526Q8TF50 670 aaPredicted RBP7.85□□□□□ -1.15
TM9SF3-204ENST00000475401 ELF4Q99607 663 aaPredicted RBP7.85□□□□□ -1.15
TM9SF3-204ENST00000475401 SPATA6Q9NWH7 488 aaPredicted RBP7.85□□□□□ -1.15
TM9SF3-204ENST00000475401 UCKL1Q9NWZ5 548 aa7.85□□□□□ -1.15
TM9SF3-204ENST00000475401 FTSJ1Q9UET6 329 aa7.85□□□□□ -1.15
TM9SF3-204ENST00000475401 ANKRD62A6NC57 917 aa7.84□□□□□ -1.15
TM9SF3-204ENST00000475401 FFAR3O14843 346 aa7.84□□□□□ -1.15
TM9SF3-204ENST00000475401 RAB11FIP3O75154 756 aa7.84□□□□□ -1.15
TM9SF3-204ENST00000475401 ATP13A4Q4VNC1 1196 aa7.84□□□□□ -1.15
TM9SF3-204ENST00000475401 VWA3BQ502W6 1294 aa7.84□□□□□ -1.15
TM9SF3-204ENST00000475401 CARFQ8N187 725 aa7.84□□□□□ -1.15
TM9SF3-204ENST00000475401 STPG3Q8N7X2 389 aa7.84□□□□□ -1.15
TM9SF3-204ENST00000475401 TACO1Q9BSH4 297 aaKnown RBP7.84□□□□□ -1.15
TM9SF3-204ENST00000475401 BTBD7Q9P203 1132 aa7.84□□□□□ -1.15
TM9SF3-204ENST00000475401 MCM8Q9UJA3 840 aa7.84□□□□□ -1.15
TM9SF3-204ENST00000475401 WASF3Q9UPY6 502 aa7.84□□□□□ -1.15
TM9SF3-204ENST00000475401 APOBEC2Q9Y235 224 aaKnown RBP7.84□□□□□ -1.15
TM9SF3-204ENST00000475401 LOC105371045A0A1W2PR82 267 aa7.83□□□□□ -1.16
TM9SF3-204ENST00000475401 UBA6A0AVT1 1052 aaPredicted RBP7.83□□□□□ -1.16
TM9SF3-204ENST00000475401 GOLGA6L22H0YM25 854 aa7.83□□□□□ -1.16
TM9SF3-204ENST00000475401 DDX3XO00571 662 aaKnown RBP eCLIP7.83□□□□□ -1.164e-76■■■■■ 28.3
TM9SF3-204ENST00000475401 DVL2O14641 736 aa7.83□□□□□ -1.16
TM9SF3-204ENST00000475401 CYP1A1P04798 512 aaPredicted RBP7.83□□□□□ -1.16
TM9SF3-204ENST00000475401 ZSCAN22P10073 491 aaPredicted RBP7.83□□□□□ -1.16
TM9SF3-204ENST00000475401 NCLP19338 710 aaKnown RBP7.83□□□□□ -1.16
TM9SF3-204ENST00000475401 IBSPP21815 317 aaPredicted RBP7.83□□□□□ -1.16
TM9SF3-204ENST00000475401 CD40P25942 277 aa7.83□□□□□ -1.16
TM9SF3-204ENST00000475401 MC4RP32245 332 aa7.83□□□□□ -1.16
TM9SF3-204ENST00000475401 IL13P35225 146 aa7.83□□□□□ -1.16
TM9SF3-204ENST00000475401 ADCYAP1R1P41586 468 aa7.83□□□□□ -1.16
TM9SF3-204ENST00000475401 EPHA7Q15375 998 aa7.83□□□□□ -1.16
TM9SF3-204ENST00000475401 VMACQ2NL98 169 aa7.83□□□□□ -1.16
TM9SF3-204ENST00000475401 PHF19Q5T6S3 580 aa7.83□□□□□ -1.16
TM9SF3-204ENST00000475401 TIGD7Q6NT04 549 aaPredicted RBP7.83□□□□□ -1.16
TM9SF3-204ENST00000475401 ATL2Q8NHH9 583 aa7.83□□□□□ -1.16
TM9SF3-204ENST00000475401 BTBD2Q9BX70 525 aa7.83□□□□□ -1.16
TM9SF3-204ENST00000475401 H2AFY2Q9P0M6 372 aaPredicted RBP7.83□□□□□ -1.16
TM9SF3-204ENST00000475401 RASSF10A6NK89 507 aa7.82□□□□□ -1.16
TM9SF3-204ENST00000475401 H0Y858 1186 aa7.82□□□□□ -1.16
TM9SF3-204ENST00000475401 LSP1P33241 339 aa7.82□□□□□ -1.16
TM9SF3-204ENST00000475401 ECE1P42892 770 aa7.82□□□□□ -1.16
TM9SF3-204ENST00000475401 ROM1Q03395 351 aa7.82□□□□□ -1.16
TM9SF3-204ENST00000475401 KRTAP19-4Q3LI73 84 aa7.82□□□□□ -1.16
TM9SF3-204ENST00000475401 WDR72Q3MJ13 1102 aa7.82□□□□□ -1.16
TM9SF3-204ENST00000475401 TTC38Q5R3I4 469 aa7.82□□□□□ -1.16
TM9SF3-204ENST00000475401 FAM124AQ86V42 546 aa7.82□□□□□ -1.16
TM9SF3-204ENST00000475401 CILP2Q8IUL8 1156 aa7.82□□□□□ -1.16
TM9SF3-204ENST00000475401 SP8Q8IXZ3 490 aa7.82□□□□□ -1.16
TM9SF3-204ENST00000475401 C7orf31Q8N865 590 aa7.82□□□□□ -1.16
TM9SF3-204ENST00000475401 TUBGCP5Q96RT8 1024 aa7.82□□□□□ -1.16
TM9SF3-204ENST00000475401 SPTLC3Q9NUV7 552 aa7.82□□□□□ -1.16
TM9SF3-204ENST00000475401 MAFGO15525 162 aa7.81□□□□□ -1.16
TM9SF3-204ENST00000475401 ULK1O75385 1050 aa7.81□□□□□ -1.16
TM9SF3-204ENST00000475401 ZNF28P17035 718 aa7.81□□□□□ -1.16
TM9SF3-204ENST00000475401 BPIP17213 487 aa7.81□□□□□ -1.16
TM9SF3-204ENST00000475401 PTX3P26022 381 aaPredicted RBP7.81□□□□□ -1.16
TM9SF3-204ENST00000475401 KCNC1P48547 511 aa7.81□□□□□ -1.16
TM9SF3-204ENST00000475401 LRRC32Q14392 662 aa7.81□□□□□ -1.16
TM9SF3-204ENST00000475401 DDB1Q16531 1140 aa7.81□□□□□ -1.16
TM9SF3-204ENST00000475401 CREB3L3Q68CJ9 461 aa7.81□□□□□ -1.16
TM9SF3-204ENST00000475401 CXXC5Q7LFL8 322 aaKnown RBP7.81□□□□□ -1.16
TM9SF3-204ENST00000475401 SIAH1Q8IUQ4 282 aa7.81□□□□□ -1.16
TM9SF3-204ENST00000475401 ADGRG2Q8IZP9 1017 aa7.81□□□□□ -1.16
TM9SF3-204ENST00000475401 AFAP1L2Q8N4X5 818 aa7.81□□□□□ -1.16
TM9SF3-204ENST00000475401 C16orf92Q96LL3 132 aa7.81□□□□□ -1.16
TM9SF3-204ENST00000475401 FOXB1Q99853 325 aa7.81□□□□□ -1.16
TM9SF3-204ENST00000475401 TMEM168Q9H0V1 697 aa7.81□□□□□ -1.16
TM9SF3-204ENST00000475401 EMC7Q9NPA0 242 aa7.81□□□□□ -1.16
TM9SF3-204ENST00000475401 KCND1Q9NSA2 647 aa7.81□□□□□ -1.16
TM9SF3-204ENST00000475401 A0A1B0GTL3 188 aa7.8□□□□□ -1.16
TM9SF3-204ENST00000475401 NEMP1O14524 444 aa7.8□□□□□ -1.16
TM9SF3-204ENST00000475401 SASH1O94885 1247 aa7.8□□□□□ -1.16
TM9SF3-204ENST00000475401 MLLT6P55198 1093 aaPredicted RBP7.8□□□□□ -1.16
TM9SF3-204ENST00000475401 ALDH6A1Q02252 535 aaKnown RBP7.8□□□□□ -1.16
TM9SF3-204ENST00000475401 DLX2Q07687 328 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms