RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 SCN10AQ9Y5Y9 1956 aa11.63□□□□□ -0.55
CASC3-204ENST00000474190 FRMPD3Q5JV73 1810 aa11.63□□□□□ -0.55
CASC3-204ENST00000474190 NOP56O00567 594 aaKnown RBP11.63□□□□□ -0.55
CASC3-204ENST00000474190 CUTAO60888 179 aa11.63□□□□□ -0.55
CASC3-204ENST00000474190 MARK3P27448 753 aa11.63□□□□□ -0.55
CASC3-204ENST00000474190 QARSP47897 775 aaKnown RBP11.63□□□□□ -0.55
CASC3-204ENST00000474190 PSMC5P62195 406 aa11.63□□□□□ -0.55
CASC3-204ENST00000474190 ZNF200P98182 395 aaPredicted RBP11.63□□□□□ -0.55
CASC3-204ENST00000474190 PRKCEQ02156 737 aa11.63□□□□□ -0.55
CASC3-204ENST00000474190 MKRN4PQ13434 485 aaPredicted RBP11.63□□□□□ -0.55
CASC3-204ENST00000474190 MFSD10Q14728 455 aa11.63□□□□□ -0.55
CASC3-204ENST00000474190 KIAA0753Q2KHM9 967 aa11.63□□□□□ -0.55
CASC3-204ENST00000474190 ADALQ6DHV7 355 aa11.63□□□□□ -0.55
CASC3-204ENST00000474190 POTEGQ6S5H5 508 aa11.63□□□□□ -0.55
CASC3-204ENST00000474190 SESTD1Q86VW0 696 aa11.63□□□□□ -0.55
CASC3-204ENST00000474190 LINC01465Q8N7H1 131 aa11.63□□□□□ -0.55
CASC3-204ENST00000474190 PCSK9Q8NBP7 692 aaKnown RBP11.63□□□□□ -0.55
CASC3-204ENST00000474190 ATP8B4Q8TF62 1192 aa11.63□□□□□ -0.55
CASC3-204ENST00000474190 WNT8BQ93098 351 aa11.63□□□□□ -0.55
CASC3-204ENST00000474190 SPATA32Q96LK8 384 aa11.63□□□□□ -0.55
CASC3-204ENST00000474190 AK8Q96MA6 479 aa11.63□□□□□ -0.55
CASC3-204ENST00000474190 SH2D3AQ9BRG2 576 aa11.63□□□□□ -0.55
CASC3-204ENST00000474190 NIFKQ9BYG3 293 aaKnown RBP11.63□□□□□ -0.55
CASC3-204ENST00000474190 SCAND2PQ9GZW5 306 aaPredicted RBP11.63□□□□□ -0.55
CASC3-204ENST00000474190 SMARCAD1Q9H4L7 1026 aa11.63□□□□□ -0.55
CASC3-204ENST00000474190 TUFT1Q9NNX1 390 aa11.63□□□□□ -0.55
CASC3-204ENST00000474190 PDLIM7Q9NR12 457 aa11.63□□□□□ -0.55
CASC3-204ENST00000474190 HDAC6Q9UBN7 1215 aa11.63□□□□□ -0.55
CASC3-204ENST00000474190 ATP6V1DQ9Y5K8 247 aa11.63□□□□□ -0.55
CASC3-204ENST00000474190 DOCK5Q9H7D0 1870 aa11.63□□□□□ -0.55
CASC3-204ENST00000474190 A0A1W2PQ27 194 aa11.62□□□□□ -0.55
CASC3-204ENST00000474190 A0A1W2PQ64 194 aa11.62□□□□□ -0.55
CASC3-204ENST00000474190 A0A1W2PQD8 194 aa11.62□□□□□ -0.55
CASC3-204ENST00000474190 MBLAC1A4D2B0 266 aaPredicted RBP11.62□□□□□ -0.55
CASC3-204ENST00000474190 KPNA6O60684 536 aa11.62□□□□□ -0.55
CASC3-204ENST00000474190 SMIM10L2AP0DMW4 78 aa11.62□□□□□ -0.55
CASC3-204ENST00000474190 SMIM10L2BP0DMW5 78 aa11.62□□□□□ -0.55
CASC3-204ENST00000474190 INSRRP14616 1297 aa11.62□□□□□ -0.55
CASC3-204ENST00000474190 NPEPPSP55786 919 aa11.62□□□□□ -0.55
CASC3-204ENST00000474190 KARSQ15046 597 aaKnown RBP11.62□□□□□ -0.55
CASC3-204ENST00000474190 LRRC26Q2I0M4 334 aa11.62□□□□□ -0.55
CASC3-204ENST00000474190 C1orf53Q5VUE5 145 aa11.62□□□□□ -0.55
CASC3-204ENST00000474190 GDF6Q6KF10 455 aaPredicted RBP11.62□□□□□ -0.55
CASC3-204ENST00000474190 PDXDC2PQ6P474 469 aa11.62□□□□□ -0.55
CASC3-204ENST00000474190 ENGASEQ8NFI3 743 aa11.62□□□□□ -0.55
CASC3-204ENST00000474190 SNX29Q8TEQ0 813 aa11.62□□□□□ -0.55
CASC3-204ENST00000474190 PIGOQ8TEQ8 1089 aa11.62□□□□□ -0.55
CASC3-204ENST00000474190 TRAPPC12Q8WVT3 735 aa11.62□□□□□ -0.55
CASC3-204ENST00000474190 DHX38Q92620 1227 aaKnown RBP11.62□□□□□ -0.55
CASC3-204ENST00000474190 TMEM106CQ9BVX2 250 aa11.62□□□□□ -0.55
CASC3-204ENST00000474190 SPC25Q9HBM1 224 aa11.62□□□□□ -0.55
CASC3-204ENST00000474190 ERAP1Q9NZ08 941 aa11.62□□□□□ -0.55
CASC3-204ENST00000474190 IGKV6-21A0A0C4DH24 114 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 E9PMD0 336 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 H0YGN5 161 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 BACH1O14867 736 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 MARCH6O60337 910 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 CABYRO75952 493 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 CD4P01730 458 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 OATP04181 439 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 MYCNP04198 464 aaPredicted RBP11.61□□□□□ -0.55
CASC3-204ENST00000474190 PLCG1P19174 1290 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 NCLP19338 710 aaKnown RBP11.61□□□□□ -0.55
CASC3-204ENST00000474190 MUTP22033 750 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 CMA1P23946 247 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 CCT6AP40227 531 aaKnown RBP11.61□□□□□ -0.55
CASC3-204ENST00000474190 ME1P48163 572 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 SLC26A2P50443 739 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 SNW1Q13573 536 aaKnown RBP11.61□□□□□ -0.55
CASC3-204ENST00000474190 ITGA7Q13683 1181 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 TMEM266Q2M3C6 531 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 TRIM71Q2Q1W2 868 aaKnown RBP11.61□□□□□ -0.55
CASC3-204ENST00000474190 XKR3Q5GH77 459 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 PLA2G4FQ68DD2 849 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 SLC39A5Q6ZMH5 540 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 CABP7Q86V35 215 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 TPH2Q8IWU9 490 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 NEK9Q8TD19 979 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 LMBR1Q8WVP7 490 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 GLG1Q92896 1179 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 PLIN2Q99541 437 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 SENP6Q9GZR1 1112 aaPredicted RBP11.61□□□□□ -0.55
CASC3-204ENST00000474190 ZSWIM4Q9H7M6 989 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 XPNPEP1Q9NQW7 623 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 LMBRD1Q9NUN5 540 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 SETD4Q9NVD3 440 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 GTF2IRD1Q9UHL9 959 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 KIAA1024Q9UPX6 916 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 SAMM50Q9Y512 469 aa11.61□□□□□ -0.55
CASC3-204ENST00000474190 KBTBD13C9JR72 458 aa11.6□□□□□ -0.55
CASC3-204ENST00000474190 ARVCFO00192 962 aa11.6□□□□□ -0.55
CASC3-204ENST00000474190 SLC26A4O43511 780 aa11.6□□□□□ -0.55
CASC3-204ENST00000474190 ZEB2O60315 1214 aa11.6□□□□□ -0.55
CASC3-204ENST00000474190 C22orf31O95567 290 aa11.6□□□□□ -0.55
CASC3-204ENST00000474190 PFKFB1P16118 471 aa11.6□□□□□ -0.55
CASC3-204ENST00000474190 CAPN2P17655 700 aa11.6□□□□□ -0.55
CASC3-204ENST00000474190 YWHABP31946 246 aaKnown RBP11.6□□□□□ -0.55
CASC3-204ENST00000474190 RARRES1P49788 294 aa11.6□□□□□ -0.55
CASC3-204ENST00000474190 NDUFA8P51970 172 aa11.6□□□□□ -0.55
CASC3-204ENST00000474190 SLC12A3P55017 1021 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms