RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 PABPC5Q96DU9 382 aaKnown RBP28.25■■■□□ 2.11
PKD1-211ENST00000474088 C11orf84Q9BUA3 381 aaPredicted RBP28.25■■■□□ 2.11
PKD1-211ENST00000474088 FTHL17Q9BXU8 183 aa28.25■■■□□ 2.11
PKD1-211ENST00000474088 CELF4Q9BZC1 486 aaKnown RBP28.25■■■□□ 2.11
PKD1-211ENST00000474088 SMIM35A0A1B0GVV1 85 aa28.24■■■□□ 2.11
PKD1-211ENST00000474088 GRXCR2A6NFK2 248 aa28.24■■■□□ 2.11
PKD1-211ENST00000474088 CCNE2O96020 404 aa28.24■■■□□ 2.11
PKD1-211ENST00000474088 IL9P15248 144 aa28.24■■■□□ 2.11
PKD1-211ENST00000474088 ADD1P35611 737 aaKnown RBP28.24■■■□□ 2.11
PKD1-211ENST00000474088 PFKFB3Q16875 520 aaPredicted RBP28.24■■■□□ 2.11
PKD1-211ENST00000474088 JAKMIP3Q5VZ66 844 aa28.24■■■□□ 2.11
PKD1-211ENST00000474088 MTHFD1LQ6UB35 978 aa28.24■■■□□ 2.11
PKD1-211ENST00000474088 NME8Q8N427 588 aa28.24■■■□□ 2.11
PKD1-211ENST00000474088 LRFN3Q9BTN0 628 aa28.24■■■□□ 2.11
PKD1-211ENST00000474088 LMAN2LQ9H0V9 348 aa28.24■■■□□ 2.11
PKD1-211ENST00000474088 NAP1L2Q9ULW6 460 aaPredicted RBP28.24■■■□□ 2.11
PKD1-211ENST00000474088 PADI3Q9ULW8 664 aa28.24■■■□□ 2.11
PKD1-211ENST00000474088 NCOR1O75376 2440 aa28.24■■■□□ 2.11
PKD1-211ENST00000474088 H3BQ06 376 aaPredicted RBP28.23■■■□□ 2.11
PKD1-211ENST00000474088 DDX39AO00148 427 aaKnown RBP28.23■■■□□ 2.11
PKD1-211ENST00000474088 FGD1P98174 961 aa28.23■■■□□ 2.11
PKD1-211ENST00000474088 COL19A1Q14993 1142 aa28.23■■■□□ 2.11
PKD1-211ENST00000474088 ABHD15Q6UXT9 468 aa28.23■■■□□ 2.11
PKD1-211ENST00000474088 PLA2G4DQ86XP0 818 aa28.23■■■□□ 2.11
PKD1-211ENST00000474088 CRIPAKQ8N1N5 446 aa28.23■■■□□ 2.11
PKD1-211ENST00000474088 IGSF9BQ9UPX0 1349 aa28.22■■■□□ 2.11
PKD1-211ENST00000474088 CCDC196A0A1B0GTZ2 297 aa28.22■■■□□ 2.11
PKD1-211ENST00000474088 FAM86B1E9PN63 330 aa28.22■■■□□ 2.11
PKD1-211ENST00000474088 GRM6O15303 877 aa28.22■■■□□ 2.11
PKD1-211ENST00000474088 FAM86B2P0C5J1 330 aa28.22■■■□□ 2.11
PKD1-211ENST00000474088 CPA1P15085 419 aa28.22■■■□□ 2.11
PKD1-211ENST00000474088 METAP2P50579 478 aaKnown RBP eCLIP28.22■■■□□ 2.113e-8■■■□□ 18.8
PKD1-211ENST00000474088 BDP1A6H8Y1 2624 aa28.22■■■□□ 2.11
PKD1-211ENST00000474088 KDM3AQ9Y4C1 1321 aa28.21■■■□□ 2.11
PKD1-211ENST00000474088 HBP1O60381 514 aa28.21■■■□□ 2.11
PKD1-211ENST00000474088 CYP3A4P08684 503 aa28.21■■■□□ 2.11
PKD1-211ENST00000474088 SCG2P13521 617 aa28.21■■■□□ 2.11
PKD1-211ENST00000474088 KLRC1P26715 233 aa28.21■■■□□ 2.11
PKD1-211ENST00000474088 APOBRQ0VD83 1088 aa28.21■■■□□ 2.11
PKD1-211ENST00000474088 TMEM31Q5JXX7 168 aa28.21■■■□□ 2.11
PKD1-211ENST00000474088 FAM160B1Q5W0V3 765 aa28.21■■■□□ 2.11
PKD1-211ENST00000474088 EP400NLQ6ZTU2 488 aa28.21■■■□□ 2.11
PKD1-211ENST00000474088 GJD3Q8N144 294 aa28.21■■■□□ 2.11
PKD1-211ENST00000474088 CRYGNQ8WXF5 182 aa28.21■■■□□ 2.11
PKD1-211ENST00000474088 KCNB2Q92953 911 aa28.21■■■□□ 2.11
PKD1-211ENST00000474088 PLVAPQ9BX97 442 aa28.21■■■□□ 2.11
PKD1-211ENST00000474088 TTC3P53804 2025 aa28.21■■■□□ 2.11
PKD1-211ENST00000474088 IGLV3-22A0A075B6J6 115 aa28.2■■■□□ 2.1
PKD1-211ENST00000474088 PI4K2BG5E9Z4 385 aa28.2■■■□□ 2.1
PKD1-211ENST00000474088 BACH1O14867 736 aa28.2■■■□□ 2.1
PKD1-211ENST00000474088 DHX15O43143 795 aaKnown RBP28.2■■■□□ 2.1
PKD1-211ENST00000474088 KRT76Q01546 638 aa28.2■■■□□ 2.1
PKD1-211ENST00000474088 PAK2Q13177 524 aa28.2■■■□□ 2.1
PKD1-211ENST00000474088 Q6ZUG5 572 aa28.2■■■□□ 2.1
PKD1-211ENST00000474088 NPAS4Q8IUM7 802 aa28.2■■■□□ 2.1
PKD1-211ENST00000474088 ATP8B4Q8TF62 1192 aa28.2■■■□□ 2.1
PKD1-211ENST00000474088 ZMYND12Q9H0C1 365 aa28.2■■■□□ 2.1
PKD1-211ENST00000474088 CLDND1Q9NY35 253 aa28.2■■■□□ 2.1
PKD1-211ENST00000474088 ESYT2A0FGR8 921 aa28.19■■■□□ 2.1
PKD1-211ENST00000474088 NCK2O43639 380 aa28.19■■■□□ 2.1
PKD1-211ENST00000474088 STAG3L1P0CL83 205 aa28.19■■■□□ 2.1
PKD1-211ENST00000474088 CCDC60Q8IWA6 550 aaPredicted RBP28.19■■■□□ 2.1
PKD1-211ENST00000474088 CMTR2Q8IYT2 770 aaKnown RBP28.19■■■□□ 2.1
PKD1-211ENST00000474088 ZNF302Q9NR11 478 aa28.19■■■□□ 2.1
PKD1-211ENST00000474088 IPO5O00410 1097 aaKnown RBP28.18■■■□□ 2.1
PKD1-211ENST00000474088 ADAMTS3O15072 1205 aa28.18■■■□□ 2.1
PKD1-211ENST00000474088 GPR37L1O60883 481 aa28.18■■■□□ 2.1
PKD1-211ENST00000474088 MCTP2Q6DN12 878 aa28.18■■■□□ 2.1
PKD1-211ENST00000474088 SWSAP1Q6NVH7 229 aa28.18■■■□□ 2.1
PKD1-211ENST00000474088 MIS18BP1Q6P0N0 1132 aa28.18■■■□□ 2.1
PKD1-211ENST00000474088 BRF1Q92994 677 aa28.18■■■□□ 2.1
PKD1-211ENST00000474088 JAKMIP1Q96N16 626 aaKnown RBP28.18■■■□□ 2.1
PKD1-211ENST00000474088 TMX1Q9H3N1 280 aa28.18■■■□□ 2.1
PKD1-211ENST00000474088 C6orf50Q9HD87 102 aa28.18■■■□□ 2.1
PKD1-211ENST00000474088 MRPL42Q9Y6G3 142 aaKnown RBP28.18■■■□□ 2.1
PKD1-211ENST00000474088 BRWD1Q9NSI6 2320 aa28.17■■■□□ 2.1
PKD1-211ENST00000474088 COL1A2P08123 1366 aa28.17■■■□□ 2.1
PKD1-211ENST00000474088 PRPF3O43395 683 aaKnown RBP28.17■■■□□ 2.1
PKD1-211ENST00000474088 SSTR3P32745 418 aaPredicted RBP28.17■■■□□ 2.1
PKD1-211ENST00000474088 HSPA4P34932 840 aa28.17■■■□□ 2.1
PKD1-211ENST00000474088 LTBRP36941 435 aa28.17■■■□□ 2.1
PKD1-211ENST00000474088 PKN1Q16512 942 aa28.17■■■□□ 2.1
PKD1-211ENST00000474088 CTC1Q2NKJ3 1217 aa28.17■■■□□ 2.1
PKD1-211ENST00000474088 ZNF484Q5JVG2 852 aa28.17■■■□□ 2.1
PKD1-211ENST00000474088 PDXDC2PQ6P474 469 aa28.17■■■□□ 2.1
PKD1-211ENST00000474088 KIAA0319LQ8IZA0 1049 aa28.17■■■□□ 2.1
PKD1-211ENST00000474088 CCDC12Q8WUD4 166 aaPredicted RBP28.17■■■□□ 2.1
PKD1-211ENST00000474088 P2RX5Q93086 422 aa28.17■■■□□ 2.1
PKD1-211ENST00000474088 UIMC1Q96RL1 719 aa28.17■■■□□ 2.1
PKD1-211ENST00000474088 ZNF577Q9BSK1 485 aa28.17■■■□□ 2.1
PKD1-211ENST00000474088 ALG13Q9NP73 1137 aaKnown RBP28.17■■■□□ 2.1
PKD1-211ENST00000474088 C11orf16Q9NQ32 467 aa28.17■■■□□ 2.1
PKD1-211ENST00000474088 PLAGL2Q9UPG8 496 aa28.17■■■□□ 2.1
PKD1-211ENST00000474088 MMP1P03956 469 aa28.16■■■□□ 2.1
PKD1-211ENST00000474088 ATP4AP20648 1035 aa28.16■■■□□ 2.1
PKD1-211ENST00000474088 HYAL1Q12794 435 aa28.16■■■□□ 2.1
PKD1-211ENST00000474088 NFX1Q12986 1120 aaKnown RBP28.16■■■□□ 2.1
PKD1-211ENST00000474088 TMEM266Q2M3C6 531 aa28.16■■■□□ 2.1
PKD1-211ENST00000474088 BLOC1S2Q6QNY1 142 aa28.16■■■□□ 2.1
PKD1-211ENST00000474088 FAM43BQ6ZT52 329 aaPredicted RBP28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms