RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 RSPH3Q86UC2 560 aa20.31■□□□□ 0.84
UPF3A-203ENST00000474056 SMAP1Q8IYB5 467 aaPredicted RBP20.31■□□□□ 0.84
UPF3A-203ENST00000474056 NSUN7Q8NE18 718 aaKnown RBP20.31■□□□□ 0.84
UPF3A-203ENST00000474056 SEPT8Q92599 483 aa20.31■□□□□ 0.84
UPF3A-203ENST00000474056 TNPO1Q92973 898 aaKnown RBP20.31■□□□□ 0.84
UPF3A-203ENST00000474056 GAS2L1Q99501 681 aaPredicted RBP20.31■□□□□ 0.84
UPF3A-203ENST00000474056 FAM49AQ9H0Q0 323 aaPredicted RBP20.31■□□□□ 0.84
UPF3A-203ENST00000474056 TCEAL9Q9UHQ7 104 aa20.31■□□□□ 0.84
UPF3A-203ENST00000474056 NLRC5Q86WI3 1866 aa20.3■□□□□ 0.84
UPF3A-203ENST00000474056 HBP1O60381 514 aa20.3■□□□□ 0.84
UPF3A-203ENST00000474056 GHRP10912 638 aa20.3■□□□□ 0.84
UPF3A-203ENST00000474056 XBP1P17861 261 aa20.3■□□□□ 0.84
UPF3A-203ENST00000474056 ST3GAL1Q11201 340 aa20.3■□□□□ 0.84
UPF3A-203ENST00000474056 ADGRE1Q14246 886 aa20.3■□□□□ 0.84
UPF3A-203ENST00000474056 Q4G0T1 1027 aa20.3■□□□□ 0.84
UPF3A-203ENST00000474056 KRT25Q7Z3Z0 450 aa20.3■□□□□ 0.84
UPF3A-203ENST00000474056 OXER1Q8TDS5 423 aa20.3■□□□□ 0.84
UPF3A-203ENST00000474056 ATP8B4Q8TF62 1192 aa20.3■□□□□ 0.84
UPF3A-203ENST00000474056 SLC5A5Q92911 643 aa20.3■□□□□ 0.84
UPF3A-203ENST00000474056 PCDHA10Q9Y5I2 948 aa20.3■□□□□ 0.84
UPF3A-203ENST00000474056 MAFBQ9Y5Q3 323 aaPredicted RBP20.3■□□□□ 0.84
UPF3A-203ENST00000474056 CDY2AQ9Y6F7 541 aa20.3■□□□□ 0.84
UPF3A-203ENST00000474056 PRRC2BQ5JSZ5 2229 aaKnown RBP20.29■□□□□ 0.84
UPF3A-203ENST00000474056 CYP3A7-CYP3A51PA0A087WV96 503 aa20.29■□□□□ 0.84
UPF3A-203ENST00000474056 LCHNA4D1U4 455 aa20.29■□□□□ 0.84
UPF3A-203ENST00000474056 GAS7O60861 476 aa20.29■□□□□ 0.84
UPF3A-203ENST00000474056 GJB5O95377 273 aa20.29■□□□□ 0.84
UPF3A-203ENST00000474056 PSAPP07602 524 aa20.29■□□□□ 0.84
UPF3A-203ENST00000474056 CYP3A7P24462 503 aa20.29■□□□□ 0.84
UPF3A-203ENST00000474056 MRPS6P82932 125 aaKnown RBP20.29■□□□□ 0.84
UPF3A-203ENST00000474056 TAP1Q03518 808 aa20.29■□□□□ 0.84
UPF3A-203ENST00000474056 LRCH2Q5VUJ6 765 aa20.29■□□□□ 0.84
UPF3A-203ENST00000474056 FAM117BQ6P1L5 589 aa20.29■□□□□ 0.84
UPF3A-203ENST00000474056 MTHFD1LQ6UB35 978 aa20.29■□□□□ 0.84
UPF3A-203ENST00000474056 TRMT1LQ7Z2T5 733 aaKnown RBP20.29■□□□□ 0.84
UPF3A-203ENST00000474056 SPRED2Q7Z698 418 aa20.29■□□□□ 0.84
UPF3A-203ENST00000474056 MYOCDQ8IZQ8 938 aa20.29■□□□□ 0.84
UPF3A-203ENST00000474056 WASF1Q92558 559 aa20.29■□□□□ 0.84
UPF3A-203ENST00000474056 MBOAT7Q96N66 472 aa20.29■□□□□ 0.84
UPF3A-203ENST00000474056 ZBED2Q9BTP6 218 aa20.29■□□□□ 0.84
UPF3A-203ENST00000474056 TEKT3Q9BXF9 490 aa20.29■□□□□ 0.84
UPF3A-203ENST00000474056 IFIH1Q9BYX4 1025 aaKnown RBP20.29■□□□□ 0.84
UPF3A-203ENST00000474056 CERS4Q9HA82 394 aa20.29■□□□□ 0.84
UPF3A-203ENST00000474056 GABBR1Q9UBS5 961 aa20.29■□□□□ 0.84
UPF3A-203ENST00000474056 SAMM50Q9Y512 469 aa20.29■□□□□ 0.84
UPF3A-203ENST00000474056 PCDHA2Q9Y5H9 948 aa20.29■□□□□ 0.84
UPF3A-203ENST00000474056 TTC3P53804 2025 aa20.29■□□□□ 0.84
UPF3A-203ENST00000474056 IGSF9BQ9UPX0 1349 aa20.28■□□□□ 0.84
UPF3A-203ENST00000474056 PRUNE2Q8WUY3 3088 aa20.28■□□□□ 0.84
UPF3A-203ENST00000474056 CCDC194A0A1B0GVG4 234 aa20.28■□□□□ 0.84
UPF3A-203ENST00000474056 WDR64B1ANS9 1081 aa20.28■□□□□ 0.84
UPF3A-203ENST00000474056 CHMP2AO43633 222 aa20.28■□□□□ 0.84
UPF3A-203ENST00000474056 JAK2O60674 1132 aa20.28■□□□□ 0.84
UPF3A-203ENST00000474056 TMEM62Q0P6H9 643 aa20.28■□□□□ 0.84
UPF3A-203ENST00000474056 LPIN1Q14693 890 aa20.28■□□□□ 0.84
UPF3A-203ENST00000474056 MOXD1Q6UVY6 613 aa20.28■□□□□ 0.84
UPF3A-203ENST00000474056 CKAP2LQ8IYA6 745 aa20.28■□□□□ 0.84
UPF3A-203ENST00000474056 APBB2Q92870 758 aa20.28■□□□□ 0.84
UPF3A-203ENST00000474056 RIT2Q99578 217 aa20.28■□□□□ 0.84
UPF3A-203ENST00000474056 UNC45AQ9H3U1 944 aa20.28■□□□□ 0.84
UPF3A-203ENST00000474056 DISC1Q9NRI5 854 aa20.28■□□□□ 0.84
UPF3A-203ENST00000474056 COL1A2P08123 1366 aa20.28■□□□□ 0.84
UPF3A-203ENST00000474056 SMIM35A0A1B0GVV1 85 aa20.27■□□□□ 0.84
UPF3A-203ENST00000474056 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.27■□□□□ 0.84
UPF3A-203ENST00000474056 EPOPA6NHQ4 379 aa20.27■□□□□ 0.84
UPF3A-203ENST00000474056 ZBTB42B2RXF5 422 aa20.27■□□□□ 0.84
UPF3A-203ENST00000474056 SLC37A4O43826 429 aa20.27■□□□□ 0.84
UPF3A-203ENST00000474056 PSMD10O75832 226 aa20.27■□□□□ 0.84
UPF3A-203ENST00000474056 AMHP03971 560 aa20.27■□□□□ 0.84
UPF3A-203ENST00000474056 KLRC1P26715 233 aa20.27■□□□□ 0.84
UPF3A-203ENST00000474056 LETM2Q2VYF4 491 aa20.27■□□□□ 0.84
UPF3A-203ENST00000474056 EARS2Q5JPH6 523 aaKnown RBP20.27■□□□□ 0.84
UPF3A-203ENST00000474056 ZNF484Q5JVG2 852 aa20.27■□□□□ 0.84
UPF3A-203ENST00000474056 FBXO47Q5MNV8 452 aa20.27■□□□□ 0.84
UPF3A-203ENST00000474056 PIK3AP1Q6ZUJ8 805 aa20.27■□□□□ 0.84
UPF3A-203ENST00000474056 USP38Q8NB14 1042 aa20.27■□□□□ 0.84
UPF3A-203ENST00000474056 ETNPPLQ8TBG4 499 aa20.27■□□□□ 0.84
UPF3A-203ENST00000474056 BBXQ8WY36 941 aaPredicted RBP20.27■□□□□ 0.84
UPF3A-203ENST00000474056 KIF2CQ99661 725 aa20.27■□□□□ 0.84
UPF3A-203ENST00000474056 TRPV2Q9Y5S1 764 aa20.27■□□□□ 0.84
UPF3A-203ENST00000474056 UNC80Q8N2C7 3258 aa20.26■□□□□ 0.83
UPF3A-203ENST00000474056 RFXAPO00287 272 aa20.26■□□□□ 0.83
UPF3A-203ENST00000474056 RPLP2P05387 115 aaKnown RBP20.26■□□□□ 0.83
UPF3A-203ENST00000474056 IGFBP4P22692 258 aa20.26■□□□□ 0.83
UPF3A-203ENST00000474056 FOSBP53539 338 aa20.26■□□□□ 0.83
UPF3A-203ENST00000474056 UGCGQ16739 394 aa20.26■□□□□ 0.83
UPF3A-203ENST00000474056 RAD9AQ99638 391 aa20.26■□□□□ 0.83
UPF3A-203ENST00000474056 DDX25Q9UHL0 483 aaKnown RBP20.26■□□□□ 0.83
UPF3A-203ENST00000474056 FAM205CA6NFA0 338 aa20.25■□□□□ 0.83
UPF3A-203ENST00000474056 M0QZ92 97 aa20.25■□□□□ 0.83
UPF3A-203ENST00000474056 ZNF862O60290 1169 aa20.25■□□□□ 0.83
UPF3A-203ENST00000474056 C22orf31O95567 290 aa20.25■□□□□ 0.83
UPF3A-203ENST00000474056 JAK3P52333 1124 aa20.25■□□□□ 0.83
UPF3A-203ENST00000474056 NR5A1Q13285 461 aa20.25■□□□□ 0.83
UPF3A-203ENST00000474056 IER5Q5VY09 327 aa20.25■□□□□ 0.83
UPF3A-203ENST00000474056 TSHZ1Q6ZSZ6 1077 aa20.25■□□□□ 0.83
UPF3A-203ENST00000474056 NEK8Q86SG6 692 aa20.25■□□□□ 0.83
UPF3A-203ENST00000474056 AGO3Q9H9G7 860 aaKnown RBP20.25■□□□□ 0.83
UPF3A-203ENST00000474056 RALGAPA2Q2PPJ7 1873 aa20.24■□□□□ 0.83
UPF3A-203ENST00000474056 SFNP31947 248 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms