RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 RAB11FIP3O75154 756 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 GJB6O95452 261 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 APPP05067 770 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 MPOP05164 745 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 PNLIPP16233 465 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 ZNF20P17024 532 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 SDHBP21912 280 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 GUCY2CP25092 1073 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 ACVRL1P37023 503 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 GYS2P54840 703 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 KIF23Q02241 960 aaPredicted RBP3.12□□□□□ -1.91
CALD1-216ENST00000473714 TMEM62Q0P6H9 643 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 RASGRF1Q13972 1273 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 RASA3Q14644 834 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 TCEA2Q15560 299 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 ARSHQ5FYA8 562 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 AXDND1Q5T1B0 1012 aaPredicted RBP3.12□□□□□ -1.91
CALD1-216ENST00000473714 C6orf15Q6UXA7 325 aaPredicted RBP3.12□□□□□ -1.91
CALD1-216ENST00000473714 RUFY4Q6ZNE9 571 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 C16orf86Q6ZW13 317 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 FAM178BQ8IXR5 827 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 FAM169BQ8N8A8 192 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 PRPF38AQ8NAV1 312 aaKnown RBP3.12□□□□□ -1.91
CALD1-216ENST00000473714 NGDNQ8NEJ9 315 aaKnown RBP3.12□□□□□ -1.91
CALD1-216ENST00000473714 CCDC136Q96JN2 1154 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 CEP89Q96ST8 783 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 CDC6Q99741 560 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 TM9SF2Q99805 663 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 LRFN3Q9BTN0 628 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 C1QTNF3Q9BXJ4 246 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 METTL14Q9HCE5 456 aaKnown RBP3.12□□□□□ -1.91
CALD1-216ENST00000473714 KLHL3Q9UH77 587 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 ZNRF3Q9ULT6 936 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 KIF7Q2M1P5 1343 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 TTC21AQ8NDW8 1320 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 ANKRD36BQ8N2N9 1353 aa3.12□□□□□ -1.91
CALD1-216ENST00000473714 FZD7O75084 574 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 HTR3BO95264 441 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 RAG1P15918 1043 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 CHRNA5P30532 468 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 BMP8BP34820 402 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 CASP7P55210 303 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 TMF1P82094 1093 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 TEKQ02763 1124 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 NCAPHQ15003 741 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 GNPTABQ3T906 1256 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 FAM109BQ6ICB4 259 aaPredicted RBP3.11□□□□□ -1.91
CALD1-216ENST00000473714 VHLLQ6RSH7 139 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 TMC6Q7Z403 805 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 PHACTR4Q8IZ21 702 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 SYNE4Q8N205 404 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 LILRB2Q8N423 598 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 DNAJB8Q8NHS0 232 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 MICAL1Q8TDZ2 1067 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 THAP3Q8WTV1 239 aaPredicted RBP3.11□□□□□ -1.91
CALD1-216ENST00000473714 DDX1Q92499 740 aaKnown RBP3.11□□□□□ -1.91
CALD1-216ENST00000473714 DPF3Q92784 378 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 LOXL4Q96JB6 756 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 C8orf49Q96NF6 230 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 GUCD1Q96NT3 240 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 SAMD11Q96NU1 681 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 EHMT1Q9H9B1 1298 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 PCDH12Q9NPG4 1184 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 GMIPQ9P107 970 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 TJP2Q9UDY2 1190 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 ZMYM5Q9UJ78 669 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 PCDHA5Q9Y5H7 936 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 SNCAIPQ9Y6H5 919 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 USP47Q96K76 1375 aa3.11□□□□□ -1.91
CALD1-216ENST00000473714 DLEC1Q9Y238 1755 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 HTTP42858 3142 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 A0A1W2PQH9 124 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 TRAF5O00463 557 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 NRDCO43847 1150 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 CELF2O95319 508 aaKnown RBP3.1□□□□□ -1.91
CALD1-216ENST00000473714 ASMTLO95671 621 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 PGRP06401 933 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 NAT2P11245 290 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 IL2RBP14784 551 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 RPL10P27635 214 aaKnown RBP3.1□□□□□ -1.91
CALD1-216ENST00000473714 GBP1P32455 592 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 CNR2P34972 360 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 ARL4AP40617 200 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 YARSP54577 528 aaKnown RBP3.1□□□□□ -1.91
CALD1-216ENST00000473714 SLC7A5Q01650 507 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 SAFB2Q14151 953 aaKnown RBP eCLIP3.1□□□□□ -1.91
CALD1-216ENST00000473714 ACAP1Q15027 740 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 C21orf62-AS1Q17RA5 79 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 BBS9Q3SYG4 887 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 SV2CQ496J9 727 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 C2orf27AQ580R0 203 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 PLEKHG4Q58EX7 1191 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 KIAA1211LQ6NV74 962 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 CEP128Q6ZU80 1094 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 ADAT2Q7Z6V5 191 aaKnown RBP3.1□□□□□ -1.91
CALD1-216ENST00000473714 LRRC47Q8N1G4 583 aaKnown RBP3.1□□□□□ -1.91
CALD1-216ENST00000473714 C19orf47Q8N9M1 422 aaKnown RBP3.1□□□□□ -1.91
CALD1-216ENST00000473714 DTWD2Q8NBA8 298 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 RBBP8NLQ8NC74 664 aaPredicted RBP3.1□□□□□ -1.91
CALD1-216ENST00000473714 ZSWIM2Q8NEG5 633 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms