RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 ADAM17P78536 824 aa21.29■■□□□ 1
CTDSP1-207ENST00000473420 CEBPZQ03701 1054 aaKnown RBP21.29■■□□□ 1
CTDSP1-207ENST00000473420 PPFIA1Q13136 1202 aa21.29■■□□□ 1
CTDSP1-207ENST00000473420 XKR3Q5GH77 459 aa21.29■■□□□ 1
CTDSP1-207ENST00000473420 GDF6Q6KF10 455 aaPredicted RBP21.29■■□□□ 1
CTDSP1-207ENST00000473420 C4orf19Q8IY42 314 aa21.29■■□□□ 1
CTDSP1-207ENST00000473420 LINC00301Q8NCQ3 95 aa21.29■■□□□ 1
CTDSP1-207ENST00000473420 AK8Q96MA6 479 aa21.29■■□□□ 1
CTDSP1-207ENST00000473420 POLR3CQ9BUI4 534 aaPredicted RBP21.29■■□□□ 1
CTDSP1-207ENST00000473420 ZSWIM4Q9H7M6 989 aa21.29■■□□□ 1
CTDSP1-207ENST00000473420 NRBP2Q9NSY0 501 aa21.29■■□□□ 1
CTDSP1-207ENST00000473420 TCHHQ07283 1943 aa21.29■■□□□ 1
CTDSP1-207ENST00000473420 MKI67P46013 3256 aaKnown RBP21.28■■□□□ 1
CTDSP1-207ENST00000473420 LYPLA2O95372 231 aa21.28■■□□□ 1
CTDSP1-207ENST00000473420 CLTBP09497 229 aa21.28■■□□□ 1
CTDSP1-207ENST00000473420 INSRRP14616 1297 aa21.28■■□□□ 1
CTDSP1-207ENST00000473420 RPA1P27694 616 aa21.28■■□□□ 1
CTDSP1-207ENST00000473420 LONP1P36776 959 aaKnown RBP21.28■■□□□ 1
CTDSP1-207ENST00000473420 FAAP100Q0VG06 881 aa21.28■■□□□ 1
CTDSP1-207ENST00000473420 STK38Q15208 465 aa21.28■■□□□ 1
CTDSP1-207ENST00000473420 GRIK4Q16099 956 aa21.28■■□□□ 1
CTDSP1-207ENST00000473420 PTGISQ16647 500 aa21.28■■□□□ 1
CTDSP1-207ENST00000473420 ZNF484Q5JVG2 852 aa21.28■■□□□ 1
CTDSP1-207ENST00000473420 PPP1R13LQ8WUF5 828 aa21.28■■□□□ 1
CTDSP1-207ENST00000473420 LMBR1Q8WVP7 490 aa21.28■■□□□ 1
CTDSP1-207ENST00000473420 DPF3Q92784 378 aa21.28■■□□□ 1
CTDSP1-207ENST00000473420 IPO9Q96P70 1041 aaKnown RBP21.28■■□□□ 1
CTDSP1-207ENST00000473420 RGL1Q9NZL6 768 aa21.28■■□□□ 1
CTDSP1-207ENST00000473420 TFIP11Q9UBB9 837 aaKnown RBP21.28■■□□□ 1
CTDSP1-207ENST00000473420 SRPRBQ9Y5M8 271 aaKnown RBP21.28■■□□□ 1
CTDSP1-207ENST00000473420 PPP6R2O75170 966 aa21.27■■□□□ 1
CTDSP1-207ENST00000473420 STBD1O95210 358 aa21.27■■□□□ 1
CTDSP1-207ENST00000473420 CYP4A11Q02928 519 aa21.27■■□□□ 1
CTDSP1-207ENST00000473420 MLLT1Q03111 559 aaPredicted RBP21.27■■□□□ 1
CTDSP1-207ENST00000473420 DNM1Q05193 864 aaKnown RBP21.27■■□□□ 1
CTDSP1-207ENST00000473420 CTTNQ14247 550 aaKnown RBP21.27■■□□□ 1
CTDSP1-207ENST00000473420 NIFKQ9BYG3 293 aaKnown RBP21.27■■□□□ 1
CTDSP1-207ENST00000473420 TRPV6Q9H1D0 765 aa21.27■■□□□ 1
CTDSP1-207ENST00000473420 TRMT13Q9NUP7 481 aaKnown RBP21.27■■□□□ 1
CTDSP1-207ENST00000473420 SETD4Q9NVD3 440 aa21.27■■□□□ 1
CTDSP1-207ENST00000473420 WRAP73Q9P2S5 460 aaPredicted RBP21.27■■□□□ 1
CTDSP1-207ENST00000473420 FBXO2Q9UK22 296 aaPredicted RBP21.27■■□□□ 1
CTDSP1-207ENST00000473420 NOD1Q9Y239 953 aa21.27■■□□□ 1
CTDSP1-207ENST00000473420 MBLAC1A4D2B0 266 aaPredicted RBP21.26■□□□□ 0.99
CTDSP1-207ENST00000473420 SPTLC2O15270 562 aa21.26■□□□□ 0.99
CTDSP1-207ENST00000473420 SLC26A4O43511 780 aa21.26■□□□□ 0.99
CTDSP1-207ENST00000473420 SPATA31C1P0DKV0 1188 aa21.26■□□□□ 0.99
CTDSP1-207ENST00000473420 KRT85P78386 507 aa21.26■□□□□ 0.99
CTDSP1-207ENST00000473420 PTK7Q13308 1070 aa21.26■□□□□ 0.99
CTDSP1-207ENST00000473420 HIC1Q14526 733 aa21.26■□□□□ 0.99
CTDSP1-207ENST00000473420 FOXD4L6Q3SYB3 417 aaPredicted RBP21.26■□□□□ 0.99
CTDSP1-207ENST00000473420 KRT79Q5XKE5 535 aa21.26■□□□□ 0.99
CTDSP1-207ENST00000473420 FOXD4L3Q6VB84 417 aaPredicted RBP21.26■□□□□ 0.99
CTDSP1-207ENST00000473420 CATSPER3Q86XQ3 398 aa21.26■□□□□ 0.99
CTDSP1-207ENST00000473420 TPH2Q8IWU9 490 aa21.26■□□□□ 0.99
CTDSP1-207ENST00000473420 C7orf61Q8IZ16 206 aa21.26■□□□□ 0.99
CTDSP1-207ENST00000473420 CTAGE1Q96RT6 745 aa21.26■□□□□ 0.99
CTDSP1-207ENST00000473420 PDLIM7Q9NR12 457 aa21.26■□□□□ 0.99
CTDSP1-207ENST00000473420 PPME1Q9Y570 386 aa21.26■□□□□ 0.99
CTDSP1-207ENST00000473420 LTBP2Q14767 1821 aa21.26■□□□□ 0.99
CTDSP1-207ENST00000473420 MED24O75448 989 aa21.25■□□□□ 0.99
CTDSP1-207ENST00000473420 MARCKSP29966 332 aaPredicted RBP21.25■□□□□ 0.99
CTDSP1-207ENST00000473420 MARCH8Q5T0T0 291 aa21.25■□□□□ 0.99
CTDSP1-207ENST00000473420 OTUD6AQ7L8S5 288 aa21.25■□□□□ 0.99
CTDSP1-207ENST00000473420 SERINC5Q86VE9 423 aa21.25■□□□□ 0.99
CTDSP1-207ENST00000473420 KRI1Q8N9T8 703 aaKnown RBP21.25■□□□□ 0.99
CTDSP1-207ENST00000473420 KCNG4Q8TDN1 519 aa21.25■□□□□ 0.99
CTDSP1-207ENST00000473420 SNX29Q8TEQ0 813 aa21.25■□□□□ 0.99
CTDSP1-207ENST00000473420 TANC1Q9C0D5 1861 aa21.25■□□□□ 0.99
CTDSP1-207ENST00000473420 CHMP5Q9NZZ3 219 aa21.25■□□□□ 0.99
CTDSP1-207ENST00000473420 SEPT9Q9UHD8 586 aaPredicted RBP21.25■□□□□ 0.99
CTDSP1-207ENST00000473420 TUBE1Q9UJT0 475 aa21.25■□□□□ 0.99
CTDSP1-207ENST00000473420 TBX21Q9UL17 535 aa21.25■□□□□ 0.99
CTDSP1-207ENST00000473420 NR2E3Q9Y5X4 410 aa21.25■□□□□ 0.99
CTDSP1-207ENST00000473420 KDM3AQ9Y4C1 1321 aa21.25■□□□□ 0.99
CTDSP1-207ENST00000473420 ZBTB42B2RXF5 422 aa21.24■□□□□ 0.99
CTDSP1-207ENST00000473420 KIAA0355O15063 1070 aa21.24■□□□□ 0.99
CTDSP1-207ENST00000473420 TREHO43280 583 aa21.24■□□□□ 0.99
CTDSP1-207ENST00000473420 XRCC6P12956 609 aaKnown RBP eCLIP21.24■□□□□ 0.998e-6■□□□□ 10.2
CTDSP1-207ENST00000473420 YWHABP31946 246 aaKnown RBP21.24■□□□□ 0.99
CTDSP1-207ENST00000473420 CCT6AP40227 531 aaKnown RBP21.24■□□□□ 0.99
CTDSP1-207ENST00000473420 ZNF200P98182 395 aaPredicted RBP21.24■□□□□ 0.99
CTDSP1-207ENST00000473420 TARBP2Q15633 366 aaKnown RBP21.24■□□□□ 0.99
CTDSP1-207ENST00000473420 ANO5Q75V66 913 aa21.24■□□□□ 0.99
CTDSP1-207ENST00000473420 KCTD17Q8N5Z5 321 aa21.24■□□□□ 0.99
CTDSP1-207ENST00000473420 CCDC155Q8N6L0 562 aa21.24■□□□□ 0.99
CTDSP1-207ENST00000473420 TMEM39AQ9NV64 488 aa21.24■□□□□ 0.99
CTDSP1-207ENST00000473420 EVPLQ92817 2033 aa21.23■□□□□ 0.99
CTDSP1-207ENST00000473420 DDX11L8A8MPP1 907 aa21.23■□□□□ 0.99
CTDSP1-207ENST00000473420 PP2D1A8MPX8 630 aa21.23■□□□□ 0.99
CTDSP1-207ENST00000473420 RPLP2P05387 115 aaKnown RBP21.23■□□□□ 0.99
CTDSP1-207ENST00000473420 IGBP1P78318 339 aa21.23■□□□□ 0.99
CTDSP1-207ENST00000473420 GRIN1Q05586 938 aa21.23■□□□□ 0.99
CTDSP1-207ENST00000473420 RBL2Q08999 1139 aa21.23■□□□□ 0.99
CTDSP1-207ENST00000473420 HYIQ5T013 277 aa21.23■□□□□ 0.99
CTDSP1-207ENST00000473420 TAF2Q6P1X5 1199 aa21.23■□□□□ 0.99
CTDSP1-207ENST00000473420 MTHFD1LQ6UB35 978 aa21.23■□□□□ 0.99
CTDSP1-207ENST00000473420 CAGE1Q8TC20 777 aa21.23■□□□□ 0.99
CTDSP1-207ENST00000473420 NACC1Q96RE7 527 aa21.23■□□□□ 0.99
CTDSP1-207ENST00000473420 MMTAG2Q9BU76 263 aaKnown RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms