RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 FAM160B1Q5W0V3 765 aa15.43■□□□□ 0.06
CHD3-209ENST00000473376 POTEBQ6S5H4 581 aa15.43■□□□□ 0.06
CHD3-209ENST00000473376 ABHD15Q6UXT9 468 aa15.43■□□□□ 0.06
CHD3-209ENST00000473376 CYP2W1Q8TAV3 490 aa15.43■□□□□ 0.06
CHD3-209ENST00000473376 CELF4Q9BZC1 486 aaKnown RBP15.43■□□□□ 0.06
CHD3-209ENST00000473376 TBC1D22BQ9NU19 505 aa15.43■□□□□ 0.06
CHD3-209ENST00000473376 TRPV2Q9Y5S1 764 aa15.43■□□□□ 0.06
CHD3-209ENST00000473376 GOLGA8AA7E2F4 631 aa15.42■□□□□ 0.06
CHD3-209ENST00000473376 GOLGA8BA8MQT2 603 aa15.42■□□□□ 0.06
CHD3-209ENST00000473376 ARP10275 920 aa15.42■□□□□ 0.06
CHD3-209ENST00000473376 KCNA5P22460 613 aa15.42■□□□□ 0.06
CHD3-209ENST00000473376 GNA11P29992 359 aa15.42■□□□□ 0.06
CHD3-209ENST00000473376 SETQ01105 290 aaPredicted RBP15.42■□□□□ 0.06
CHD3-209ENST00000473376 ITGB3BPQ13352 177 aaPredicted RBP15.42■□□□□ 0.06
CHD3-209ENST00000473376 CTC1Q2NKJ3 1217 aa15.42■□□□□ 0.06
CHD3-209ENST00000473376 ZNF484Q5JVG2 852 aa15.42■□□□□ 0.06
CHD3-209ENST00000473376 NPAS4Q8IUM7 802 aa15.42■□□□□ 0.06
CHD3-209ENST00000473376 RASEFQ8IZ41 740 aa15.42■□□□□ 0.06
CHD3-209ENST00000473376 ATP8B4Q8TF62 1192 aa15.42■□□□□ 0.06
CHD3-209ENST00000473376 AGXT2Q9BYV1 514 aa15.42■□□□□ 0.06
CHD3-209ENST00000473376 AGO3Q9H9G7 860 aaKnown RBP15.42■□□□□ 0.06
CHD3-209ENST00000473376 TRPC6Q9Y210 931 aa15.42■□□□□ 0.06
CHD3-209ENST00000473376 RALGAPA2Q2PPJ7 1873 aa15.42■□□□□ 0.06
CHD3-209ENST00000473376 BRWD1Q9NSI6 2320 aa15.42■□□□□ 0.06
CHD3-209ENST00000473376 TTC3P53804 2025 aa15.41■□□□□ 0.06
CHD3-209ENST00000473376 KLF18A0A0U1RQI7 1052 aa15.41■□□□□ 0.06
CHD3-209ENST00000473376 SCG2P13521 617 aa15.41■□□□□ 0.06
CHD3-209ENST00000473376 ALADP13716 330 aa15.41■□□□□ 0.06
CHD3-209ENST00000473376 CIITAP33076 1130 aa15.41■□□□□ 0.06
CHD3-209ENST00000473376 BTG3Q14201 252 aaPredicted RBP15.41■□□□□ 0.06
CHD3-209ENST00000473376 ADCK5Q3MIX3 580 aa15.41■□□□□ 0.06
CHD3-209ENST00000473376 TMEM31Q5JXX7 168 aa15.41■□□□□ 0.06
CHD3-209ENST00000473376 PTCRAQ6ISU1 281 aaPredicted RBP15.41■□□□□ 0.06
CHD3-209ENST00000473376 ZNF746Q6NUN9 644 aaPredicted RBP15.41■□□□□ 0.06
CHD3-209ENST00000473376 MTHFD1LQ6UB35 978 aa15.41■□□□□ 0.06
CHD3-209ENST00000473376 SMAP1Q8IYB5 467 aaPredicted RBP15.41■□□□□ 0.06
CHD3-209ENST00000473376 GJD3Q8N144 294 aa15.41■□□□□ 0.06
CHD3-209ENST00000473376 BICD2Q8TD16 824 aa15.41■□□□□ 0.06
CHD3-209ENST00000473376 PPP2R3CQ969Q6 453 aa15.41■□□□□ 0.06
CHD3-209ENST00000473376 C6orf50Q9HD87 102 aa15.41■□□□□ 0.06
CHD3-209ENST00000473376 PADI3Q9ULW8 664 aa15.41■□□□□ 0.06
CHD3-209ENST00000473376 TCF20Q9UGU0 1960 aaKnown RBP15.4■□□□□ 0.06
CHD3-209ENST00000473376 IGLV3-22A0A075B6J6 115 aa15.4■□□□□ 0.06
CHD3-209ENST00000473376 IPO5O00410 1097 aaKnown RBP15.4■□□□□ 0.06
CHD3-209ENST00000473376 DHX15O43143 795 aaKnown RBP15.4■□□□□ 0.06
CHD3-209ENST00000473376 PRPF3O43395 683 aaKnown RBP15.4■□□□□ 0.06
CHD3-209ENST00000473376 MMP1P03956 469 aa15.4■□□□□ 0.06
CHD3-209ENST00000473376 CDC27P30260 824 aa15.4■□□□□ 0.06
CHD3-209ENST00000473376 CD52P31358 61 aa15.4■□□□□ 0.06
CHD3-209ENST00000473376 HSPA4P34932 840 aa15.4■□□□□ 0.06
CHD3-209ENST00000473376 CTNNB1P35222 781 aa15.4■□□□□ 0.06
CHD3-209ENST00000473376 ZNF76P36508 570 aa15.4■□□□□ 0.06
CHD3-209ENST00000473376 METAP2P50579 478 aaKnown RBP eCLIP15.4■□□□□ 0.06
CHD3-209ENST00000473376 EVCP57679 992 aa15.4■□□□□ 0.06
CHD3-209ENST00000473376 KRT76Q01546 638 aa15.4■□□□□ 0.06
CHD3-209ENST00000473376 PAK2Q13177 524 aa15.4■□□□□ 0.06
CHD3-209ENST00000473376 TCEAL5Q5H9L2 206 aa15.4■□□□□ 0.06
CHD3-209ENST00000473376 MIS18BP1Q6P0N0 1132 aa15.4■□□□□ 0.06
CHD3-209ENST00000473376 RAB11FIP4Q86YS3 637 aa15.4■□□□□ 0.06
CHD3-209ENST00000473376 FAM177A1Q8N128 213 aaPredicted RBP15.4■□□□□ 0.06
CHD3-209ENST00000473376 BBXQ8WY36 941 aaPredicted RBP15.4■□□□□ 0.06
CHD3-209ENST00000473376 C1orf112Q9NSG2 853 aa15.4■□□□□ 0.06
CHD3-209ENST00000473376 PKD2L1Q9P0L9 805 aa15.4■□□□□ 0.06
CHD3-209ENST00000473376 MAFBQ9Y5Q3 323 aaPredicted RBP15.4■□□□□ 0.06
CHD3-209ENST00000473376 DOCK5Q9H7D0 1870 aa15.4■□□□□ 0.06
CHD3-209ENST00000473376 FSD2A1L4K1 749 aa15.39■□□□□ 0.05
CHD3-209ENST00000473376 FAM86B1E9PN63 330 aa15.39■□□□□ 0.05
CHD3-209ENST00000473376 CCNE2O96020 404 aa15.39■□□□□ 0.05
CHD3-209ENST00000473376 FAM86B2P0C5J1 330 aa15.39■□□□□ 0.05
CHD3-209ENST00000473376 KLRC1P26715 233 aa15.39■□□□□ 0.05
CHD3-209ENST00000473376 IGBP1P78318 339 aa15.39■□□□□ 0.05
CHD3-209ENST00000473376 FGD1P98174 961 aa15.39■□□□□ 0.05
CHD3-209ENST00000473376 RTN4RL1Q86UN2 441 aaPredicted RBP15.39■□□□□ 0.05
CHD3-209ENST00000473376 PLA2G4DQ86XP0 818 aa15.39■□□□□ 0.05
CHD3-209ENST00000473376 REXO1Q8N1G1 1221 aaKnown RBP15.39■□□□□ 0.05
CHD3-209ENST00000473376 LRFN3Q9BTN0 628 aa15.39■□□□□ 0.05
CHD3-209ENST00000473376 FAM49AQ9H0Q0 323 aaPredicted RBP15.39■□□□□ 0.05
CHD3-209ENST00000473376 EPHX3Q9H6B9 360 aa15.39■□□□□ 0.05
CHD3-209ENST00000473376 ZNF302Q9NR11 478 aa15.39■□□□□ 0.05
CHD3-209ENST00000473376 PLAGL2Q9UPG8 496 aa15.39■□□□□ 0.05
CHD3-209ENST00000473376 CEP131Q9UPN4 1083 aa15.39■□□□□ 0.05
CHD3-209ENST00000473376 GPR182O15218 404 aa15.38■□□□□ 0.05
CHD3-209ENST00000473376 MAGEB2O15479 319 aa15.38■□□□□ 0.05
CHD3-209ENST00000473376 PSMA5P28066 241 aa15.38■□□□□ 0.05
CHD3-209ENST00000473376 ADD1P35611 737 aaKnown RBP15.38■□□□□ 0.05
CHD3-209ENST00000473376 PLA2G5P39877 138 aa15.38■□□□□ 0.05
CHD3-209ENST00000473376 SARSP49591 514 aaKnown RBP15.38■□□□□ 0.05
CHD3-209ENST00000473376 UBE3AQ05086 875 aa15.38■□□□□ 0.05
CHD3-209ENST00000473376 CSPP1Q1MSJ5 1256 aa15.38■□□□□ 0.05
CHD3-209ENST00000473376 KIAA0319LQ8IZA0 1049 aa15.38■□□□□ 0.05
CHD3-209ENST00000473376 CCDC148Q8NFR7 591 aa15.38■□□□□ 0.05
CHD3-209ENST00000473376 LINC01599Q8WXQ3 324 aa15.38■□□□□ 0.05
CHD3-209ENST00000473376 RNF26Q9BY78 433 aaPredicted RBP15.38■□□□□ 0.05
CHD3-209ENST00000473376 SH3GLB2Q9NR46 395 aa15.38■□□□□ 0.05
CHD3-209ENST00000473376 C19orf67A6NJJ6 358 aa15.37■□□□□ 0.05
CHD3-209ENST00000473376 BACH1O14867 736 aa15.37■□□□□ 0.05
CHD3-209ENST00000473376 GRM6O15303 877 aa15.37■□□□□ 0.05
CHD3-209ENST00000473376 REC8O95072 547 aa15.37■□□□□ 0.05
CHD3-209ENST00000473376 USP11P51784 963 aa15.37■□□□□ 0.05
CHD3-209ENST00000473376 PKN1Q16512 942 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms