RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 NOC3LQ8WTT2 800 aaKnown RBP14.24□□□□□ -0.13
VPS13D-205ENST00000473099 NELFBQ8WX92 580 aa14.24□□□□□ -0.13
VPS13D-205ENST00000473099 R3HDMLQ9H3Y0 253 aa14.24□□□□□ -0.13
VPS13D-205ENST00000473099 CPA4Q9UI42 421 aa14.24□□□□□ -0.13
VPS13D-205ENST00000473099 DDX41Q9UJV9 622 aaKnown RBP14.24□□□□□ -0.13
VPS13D-205ENST00000473099 CTNND2Q9UQB3 1225 aa14.24□□□□□ -0.13
VPS13D-205ENST00000473099 GDAQ9Y2T3 454 aa14.24□□□□□ -0.13
VPS13D-205ENST00000473099 NFE2L3Q9Y4A8 694 aa14.24□□□□□ -0.13
VPS13D-205ENST00000473099 EVPLQ92817 2033 aa14.24□□□□□ -0.13
VPS13D-205ENST00000473099 IGSF9BQ9UPX0 1349 aa14.23□□□□□ -0.13
VPS13D-205ENST00000473099 RASSF10A6NK89 507 aa14.23□□□□□ -0.13
VPS13D-205ENST00000473099 COBLO75128 1261 aa14.23□□□□□ -0.13
VPS13D-205ENST00000473099 FARP2O94887 1054 aaPredicted RBP14.23□□□□□ -0.13
VPS13D-205ENST00000473099 FAM13AO94988 1023 aa14.23□□□□□ -0.13
VPS13D-205ENST00000473099 TPM3P06753 285 aa14.23□□□□□ -0.13
VPS13D-205ENST00000473099 CCNE1P24864 410 aa14.23□□□□□ -0.13
VPS13D-205ENST00000473099 CDC25BP30305 580 aa14.23□□□□□ -0.13
VPS13D-205ENST00000473099 YWHABP31946 246 aaKnown RBP14.23□□□□□ -0.13
VPS13D-205ENST00000473099 VEGFBP49765 207 aa14.23□□□□□ -0.13
VPS13D-205ENST00000473099 SPAG1Q07617 926 aa14.23□□□□□ -0.13
VPS13D-205ENST00000473099 HERC4Q5GLZ8 1057 aaPredicted RBP14.23□□□□□ -0.13
VPS13D-205ENST00000473099 FAM160B1Q5W0V3 765 aa14.23□□□□□ -0.13
VPS13D-205ENST00000473099 PAXIP1Q6ZW49 1069 aaPredicted RBP14.23□□□□□ -0.13
VPS13D-205ENST00000473099 STXBP4Q6ZWJ1 553 aa14.23□□□□□ -0.13
VPS13D-205ENST00000473099 CYFIP1Q7L576 1253 aa14.23□□□□□ -0.13
VPS13D-205ENST00000473099 ANKRD20A12PQ8NF67 263 aa14.23□□□□□ -0.13
VPS13D-205ENST00000473099 SOCS4Q8WXH5 440 aa14.23□□□□□ -0.13
VPS13D-205ENST00000473099 MRFAP1L1Q96HT8 127 aa14.23□□□□□ -0.13
VPS13D-205ENST00000473099 REEP2Q9BRK0 252 aa14.23□□□□□ -0.13
VPS13D-205ENST00000473099 MLXIPQ9HAP2 919 aa14.23□□□□□ -0.13
VPS13D-205ENST00000473099 OLFML3Q9NRN5 406 aa14.23□□□□□ -0.13
VPS13D-205ENST00000473099 PPME1Q9Y570 386 aa14.23□□□□□ -0.13
VPS13D-205ENST00000473099 THSD7BQ9C0I4 1608 aa14.23□□□□□ -0.13
VPS13D-205ENST00000473099 RBM47A0AV96 593 aaKnown RBP14.22□□□□□ -0.13
VPS13D-205ENST00000473099 GOLGA6L6A8MZA4 724 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 FGFR1OPO95684 399 aaKnown RBP14.22□□□□□ -0.13
VPS13D-205ENST00000473099 GGPS1O95749 300 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 HOXC6P09630 235 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 RARRES1P49788 294 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 ZNF75DP51815 510 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 SP2Q02086 613 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 LRRC63Q05C16 580 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 STK4Q13043 487 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 MAP2K5Q13163 448 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 XKR3Q5GH77 459 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 MORN1Q5T089 497 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 CCDC62Q6P9F0 684 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 MYOCDQ8IZQ8 938 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 KIAA0895Q8NCT3 520 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 SLC17A8Q8NDX2 589 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 SEPT1Q8WYJ6 367 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 P2RX5Q93086 422 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 MAML3Q96JK9 1138 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 CTAGE1Q96RT6 745 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 TSG101Q99816 390 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 RUSC1Q9BVN2 902 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 ABHD16BQ9H3Z7 469 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 PARVGQ9HBI0 331 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 ZNF302Q9NR11 478 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 FANCLQ9NW38 375 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.22□□□□□ -0.13
VPS13D-205ENST00000473099 WRAP73Q9P2S5 460 aaPredicted RBP14.22□□□□□ -0.13
VPS13D-205ENST00000473099 GABBR1Q9UBS5 961 aa14.22□□□□□ -0.13
VPS13D-205ENST00000473099 UBE4BO95155 1302 aa14.21□□□□□ -0.13
VPS13D-205ENST00000473099 SIP14410 1827 aa14.21□□□□□ -0.13
VPS13D-205ENST00000473099 IGKV6D-21A0A0A0MT36 114 aa14.21□□□□□ -0.13
VPS13D-205ENST00000473099 BACH1O14867 736 aa14.21□□□□□ -0.13
VPS13D-205ENST00000473099 NKRFO15226 690 aaKnown RBP eCLIP14.21□□□□□ -0.13
VPS13D-205ENST00000473099 MAPTP10636 758 aaKnown RBP14.21□□□□□ -0.13
VPS13D-205ENST00000473099 ZNF18P17022 549 aa14.21□□□□□ -0.13
VPS13D-205ENST00000473099 CDK11BP21127 795 aaKnown RBP14.21□□□□□ -0.13
VPS13D-205ENST00000473099 ZNF131P52739 623 aa14.21□□□□□ -0.13
VPS13D-205ENST00000473099 CRHR2Q13324 411 aa14.21□□□□□ -0.13
VPS13D-205ENST00000473099 ALCAMQ13740 583 aa14.21□□□□□ -0.13
VPS13D-205ENST00000473099 XKR9Q5GH70 373 aa14.21□□□□□ -0.13
VPS13D-205ENST00000473099 CELF3Q5SZQ8 465 aaKnown RBP14.21□□□□□ -0.13
VPS13D-205ENST00000473099 CENPPQ6IPU0 288 aa14.21□□□□□ -0.13
VPS13D-205ENST00000473099 SWSAP1Q6NVH7 229 aa14.21□□□□□ -0.13
VPS13D-205ENST00000473099 PADI6Q6TGC4 694 aa14.21□□□□□ -0.13
VPS13D-205ENST00000473099 PPP4R3CPQ6ZMV5 832 aa14.21□□□□□ -0.13
VPS13D-205ENST00000473099 EEPD1Q7L9B9 569 aa14.21□□□□□ -0.13
VPS13D-205ENST00000473099 FAM114A1Q8IWE2 563 aa14.21□□□□□ -0.13
VPS13D-205ENST00000473099 FBXO16Q8IX29 292 aaPredicted RBP14.21□□□□□ -0.13
VPS13D-205ENST00000473099 DHX37Q8IY37 1157 aaKnown RBP14.21□□□□□ -0.13
VPS13D-205ENST00000473099 TRMT44Q8IYL2 757 aaKnown RBP14.21□□□□□ -0.13
VPS13D-205ENST00000473099 AFAP1L1Q8TED9 768 aa14.21□□□□□ -0.13
VPS13D-205ENST00000473099 FAM167AQ96KS9 214 aa14.21□□□□□ -0.13
VPS13D-205ENST00000473099 DRC1Q96MC2 740 aa14.21□□□□□ -0.13
VPS13D-205ENST00000473099 TINF2Q9BSI4 451 aa14.21□□□□□ -0.13
VPS13D-205ENST00000473099 HSD3B7Q9H2F3 369 aa14.21□□□□□ -0.13
VPS13D-205ENST00000473099 SLC39A2Q9NP94 309 aa14.21□□□□□ -0.13
VPS13D-205ENST00000473099 KCNG1Q9UIX4 513 aa14.21□□□□□ -0.13
VPS13D-205ENST00000473099 MAFBQ9Y5Q3 323 aaPredicted RBP14.21□□□□□ -0.13
VPS13D-205ENST00000473099 NOP56O00567 594 aaKnown RBP14.2□□□□□ -0.14
VPS13D-205ENST00000473099 EIF3DO15371 548 aaKnown RBP eCLIP14.2□□□□□ -0.14
VPS13D-205ENST00000473099 SERPINC1P01008 464 aa14.2□□□□□ -0.14
VPS13D-205ENST00000473099 TXNP10599 105 aaKnown RBP14.2□□□□□ -0.14
VPS13D-205ENST00000473099 RGS2P41220 211 aa14.2□□□□□ -0.14
VPS13D-205ENST00000473099 SLC26A2P50443 739 aa14.2□□□□□ -0.14
VPS13D-205ENST00000473099 STX17P56962 302 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms