RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 GOPCQ9HD26 462 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 STK17AQ9UEE5 414 aa14.54□□□□□ -0.08
SCAMP4-207ENST00000472442 LSP1P33241 339 aa14.53□□□□□ -0.08
SCAMP4-207ENST00000472442 ZNF280AP59817 542 aaPredicted RBP14.53□□□□□ -0.08
SCAMP4-207ENST00000472442 APBA1Q02410 837 aa14.53□□□□□ -0.08
SCAMP4-207ENST00000472442 NAA35Q5VZE5 725 aa14.53□□□□□ -0.08
SCAMP4-207ENST00000472442 C8orf74Q6P047 294 aa14.53□□□□□ -0.08
SCAMP4-207ENST00000472442 SV2BQ7L1I2 683 aa14.53□□□□□ -0.08
SCAMP4-207ENST00000472442 GPIHBP1Q8IV16 184 aa14.53□□□□□ -0.08
SCAMP4-207ENST00000472442 CAVIN3Q969G5 261 aa14.53□□□□□ -0.08
SCAMP4-207ENST00000472442 TEPSINQ96N21 525 aa14.53□□□□□ -0.08
SCAMP4-207ENST00000472442 CD248Q9HCU0 757 aa14.53□□□□□ -0.08
SCAMP4-207ENST00000472442 PHF20L1A8MW92 1017 aa14.53□□□□□ -0.08
SCAMP4-207ENST00000472442 NCK2O43639 380 aa14.53□□□□□ -0.08
SCAMP4-207ENST00000472442 NAP1L1P55209 391 aaKnown RBP14.53□□□□□ -0.08
SCAMP4-207ENST00000472442 AMPD3Q01432 767 aa14.53□□□□□ -0.08
SCAMP4-207ENST00000472442 RAD54LQ92698 747 aa14.53□□□□□ -0.08
SCAMP4-207ENST00000472442 LENG9Q96B70 501 aa14.53□□□□□ -0.08
SCAMP4-207ENST00000472442 CCDC43Q96MW1 224 aaKnown RBP14.53□□□□□ -0.08
SCAMP4-207ENST00000472442 IFIH1Q9BYX4 1025 aaKnown RBP14.53□□□□□ -0.08
SCAMP4-207ENST00000472442 SH2D4AQ9H788 454 aa14.53□□□□□ -0.08
SCAMP4-207ENST00000472442 BCS1LQ9Y276 419 aa14.53□□□□□ -0.08
SCAMP4-207ENST00000472442 ASTN2O75129 1339 aaPredicted RBP14.52□□□□□ -0.08
SCAMP4-207ENST00000472442 A6NNZ2 444 aa14.52□□□□□ -0.08
SCAMP4-207ENST00000472442 FAM86B1E9PN63 330 aa14.52□□□□□ -0.08
SCAMP4-207ENST00000472442 PSMA7O14818 248 aa14.52□□□□□ -0.08
SCAMP4-207ENST00000472442 USO1O60763 962 aaKnown RBP14.52□□□□□ -0.08
SCAMP4-207ENST00000472442 FAM86B2P0C5J1 330 aa14.52□□□□□ -0.08
SCAMP4-207ENST00000472442 R3HDM1Q15032 1099 aaKnown RBP14.52□□□□□ -0.08
SCAMP4-207ENST00000472442 TUBB8Q3ZCM7 444 aa14.52□□□□□ -0.08
SCAMP4-207ENST00000472442 RNF187Q5TA31 235 aaPredicted RBP14.52□□□□□ -0.08
SCAMP4-207ENST00000472442 TTI2Q6NXR4 508 aa14.52□□□□□ -0.08
SCAMP4-207ENST00000472442 CCDC125Q86Z20 511 aa14.52□□□□□ -0.08
SCAMP4-207ENST00000472442 CSGALNACT2Q8N6G5 542 aa14.52□□□□□ -0.08
SCAMP4-207ENST00000472442 KIAA0895Q8NCT3 520 aa14.52□□□□□ -0.08
SCAMP4-207ENST00000472442 TBC1D5Q92609 795 aa14.52□□□□□ -0.08
SCAMP4-207ENST00000472442 NAP1L4Q99733 375 aaKnown RBP14.52□□□□□ -0.08
SCAMP4-207ENST00000472442 NUP58Q9BVL2 599 aa14.52□□□□□ -0.08
SCAMP4-207ENST00000472442 HYOU1Q9Y4L1 999 aa14.52□□□□□ -0.08
SCAMP4-207ENST00000472442 SREBF1P36956 1147 aa14.52□□□□□ -0.09
SCAMP4-207ENST00000472442 RASSF7Q02833 373 aa14.52□□□□□ -0.09
SCAMP4-207ENST00000472442 TNIP1Q15025 636 aa14.52□□□□□ -0.09
SCAMP4-207ENST00000472442 MOXD1Q6UVY6 613 aa14.52□□□□□ -0.09
SCAMP4-207ENST00000472442 ETNPPLQ8TBG4 499 aa14.52□□□□□ -0.09
SCAMP4-207ENST00000472442 CDK5RAP3Q96JB5 506 aa14.52□□□□□ -0.09
SCAMP4-207ENST00000472442 RBM12Q9NTZ6 932 aaKnown RBP14.52□□□□□ -0.09
SCAMP4-207ENST00000472442 MARCH6O60337 910 aa14.52□□□□□ -0.09
SCAMP4-207ENST00000472442 KDM7AQ6ZMT4 941 aa14.52□□□□□ -0.09
SCAMP4-207ENST00000472442 SPATS2Q86XZ4 545 aaKnown RBP14.52□□□□□ -0.09
SCAMP4-207ENST00000472442 RETREG2Q8NC44 543 aa14.52□□□□□ -0.09
SCAMP4-207ENST00000472442 ZNF473Q8WTR7 871 aaKnown RBP14.52□□□□□ -0.09
SCAMP4-207ENST00000472442 DUSP9Q99956 384 aaKnown RBP14.52□□□□□ -0.09
SCAMP4-207ENST00000472442 EPN3Q9H201 632 aa14.52□□□□□ -0.09
SCAMP4-207ENST00000472442 RANBP17Q9H2T7 1088 aaKnown RBP14.52□□□□□ -0.09
SCAMP4-207ENST00000472442 FBXO28Q9NVF7 368 aa14.52□□□□□ -0.09
SCAMP4-207ENST00000472442 CEP83Q9Y592 693 aa14.52□□□□□ -0.09
SCAMP4-207ENST00000472442 PCDHA13Q9Y5I0 950 aa14.52□□□□□ -0.09
SCAMP4-207ENST00000472442 ESYT3A0FGR9 886 aa14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 ZNF233A6NK53 670 aa14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 PIK3CDO00329 1044 aa14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 TCP1P17987 556 aaKnown RBP14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 STAT3P40763 770 aa14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 SEC24CP53992 1094 aa14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 SPIRE1Q08AE8 756 aa14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 PRR16Q569H4 304 aa14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 HYIQ5T013 277 aa14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 CFAP58Q5T655 872 aa14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 MICALCLQ6ZW33 695 aa14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 DYMQ7RTS9 669 aa14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 SAMD7Q7Z3H4 446 aa14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 CNOT6LQ96LI5 555 aaKnown RBP14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 ZSCAN5CA6NGD5 496 aaPredicted RBP14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 SPDYE3A6NKU9 549 aa14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 NKRFO15226 690 aaKnown RBP eCLIP14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 FAM153BP0C7A2 387 aa14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 PRLRP16471 622 aa14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 FAM153CQ494X1 144 aa14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 Q4G0T1 1027 aa14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 CCDC174Q6PII3 467 aa14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 CYP2W1Q8TAV3 490 aa14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 DHTKD1Q96HY7 919 aaPredicted RBP14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 DONSONQ9NYP3 566 aa14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 FAM153AQ9UHL3 310 aa14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 NFU1Q9UMS0 254 aa14.51□□□□□ -0.09
SCAMP4-207ENST00000472442 FOSP01100 380 aaPredicted RBP14.5□□□□□ -0.09
SCAMP4-207ENST00000472442 PAFAH1B1P43034 410 aa14.5□□□□□ -0.09
SCAMP4-207ENST00000472442 MTIF2P46199 727 aaKnown RBP14.5□□□□□ -0.09
SCAMP4-207ENST00000472442 CARSP49589 748 aaKnown RBP14.5□□□□□ -0.09
SCAMP4-207ENST00000472442 ZKSCAN4Q969J2 545 aaPredicted RBP14.5□□□□□ -0.09
SCAMP4-207ENST00000472442 ALS2CR12Q96Q35 445 aa14.5□□□□□ -0.09
SCAMP4-207ENST00000472442 A1CFQ9NQ94 594 aaKnown RBP14.5□□□□□ -0.09
SCAMP4-207ENST00000472442 ARHGAP20Q9P2F6 1191 aa14.5□□□□□ -0.09
SCAMP4-207ENST00000472442 SUFUQ9UMX1 484 aa14.5□□□□□ -0.09
SCAMP4-207ENST00000472442 PPP1R37O75864 691 aa14.5□□□□□ -0.09
SCAMP4-207ENST00000472442 ASNSP08243 561 aa14.5□□□□□ -0.09
SCAMP4-207ENST00000472442 NR1D1P20393 614 aa14.5□□□□□ -0.09
SCAMP4-207ENST00000472442 TNFRSF8P28908 595 aa14.5□□□□□ -0.09
SCAMP4-207ENST00000472442 GMPSP49915 693 aaPredicted RBP14.5□□□□□ -0.09
SCAMP4-207ENST00000472442 KIF11P52732 1056 aa14.5□□□□□ -0.09
SCAMP4-207ENST00000472442 PTGISQ16647 500 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms