RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 UIMC1Q96RL1 719 aa10.51□□□□□ -0.73
CPSF4-211ENST00000471455 PIGSQ96S52 555 aa10.51□□□□□ -0.73
CPSF4-211ENST00000471455 SENP7Q9BQF6 1050 aa10.51□□□□□ -0.73
CPSF4-211ENST00000471455 KCNH6Q9H252 994 aa10.51□□□□□ -0.73
CPSF4-211ENST00000471455 RNPEPQ9H4A4 650 aa10.51□□□□□ -0.73
CPSF4-211ENST00000471455 SEC63Q9UGP8 760 aaKnown RBP10.51□□□□□ -0.73
CPSF4-211ENST00000471455 XIRP2A4UGR9 3374 aa10.51□□□□□ -0.73
CPSF4-211ENST00000471455 RALGAPA2Q2PPJ7 1873 aa10.51□□□□□ -0.73
CPSF4-211ENST00000471455 H3BQ06 376 aaPredicted RBP10.5□□□□□ -0.73
CPSF4-211ENST00000471455 KIF5BP33176 963 aa10.5□□□□□ -0.73
CPSF4-211ENST00000471455 COL19A1Q14993 1142 aa10.5□□□□□ -0.73
CPSF4-211ENST00000471455 TCEAL5Q5H9L2 206 aa10.5□□□□□ -0.73
CPSF4-211ENST00000471455 FAM26DQ5JW98 314 aa10.5□□□□□ -0.73
CPSF4-211ENST00000471455 PCNX4Q63HM2 1172 aa10.5□□□□□ -0.73
CPSF4-211ENST00000471455 PPP1R18Q6NYC8 613 aa10.5□□□□□ -0.73
CPSF4-211ENST00000471455 CYFIP1Q7L576 1253 aa10.5□□□□□ -0.73
CPSF4-211ENST00000471455 RPAINQ86UA6 219 aa10.5□□□□□ -0.73
CPSF4-211ENST00000471455 NCOA7Q8NI08 942 aa10.5□□□□□ -0.73
CPSF4-211ENST00000471455 CTCFLQ8NI51 663 aaPredicted RBP10.5□□□□□ -0.73
CPSF4-211ENST00000471455 LMBR1Q8WVP7 490 aa10.5□□□□□ -0.73
CPSF4-211ENST00000471455 TNPO1Q92973 898 aaKnown RBP10.5□□□□□ -0.73
CPSF4-211ENST00000471455 RRP36Q96EU6 259 aaKnown RBP10.5□□□□□ -0.73
CPSF4-211ENST00000471455 GPR20Q99678 358 aa10.5□□□□□ -0.73
CPSF4-211ENST00000471455 CD320Q9NPF0 282 aa10.5□□□□□ -0.73
CPSF4-211ENST00000471455 SETD4Q9NVD3 440 aa10.5□□□□□ -0.73
CPSF4-211ENST00000471455 CLDND1Q9NY35 253 aa10.5□□□□□ -0.73
CPSF4-211ENST00000471455 ADGRA3Q8IWK6 1321 aa10.5□□□□□ -0.73
CPSF4-211ENST00000471455 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.49□□□□□ -0.73
CPSF4-211ENST00000471455 C5orf67F2Z3F1 127 aa10.49□□□□□ -0.73
CPSF4-211ENST00000471455 ZP2Q05996 745 aa10.49□□□□□ -0.73
CPSF4-211ENST00000471455 PPFIA1Q13136 1202 aa10.49□□□□□ -0.73
CPSF4-211ENST00000471455 UTP14CQ5TAP6 766 aaKnown RBP10.49□□□□□ -0.73
CPSF4-211ENST00000471455 CYB5R4Q7L1T6 521 aa10.49□□□□□ -0.73
CPSF4-211ENST00000471455 ADHFE1Q8IWW8 467 aa10.49□□□□□ -0.73
CPSF4-211ENST00000471455 PARP9Q8IXQ6 854 aa10.49□□□□□ -0.73
CPSF4-211ENST00000471455 GPKOWQ92917 476 aaPredicted RBP eCLIP10.49□□□□□ -0.73
CPSF4-211ENST00000471455 THAP11Q96EK4 314 aa10.49□□□□□ -0.73
CPSF4-211ENST00000471455 LZTS2Q9BRK4 669 aa10.49□□□□□ -0.73
CPSF4-211ENST00000471455 PLVAPQ9BX97 442 aa10.49□□□□□ -0.73
CPSF4-211ENST00000471455 SLC24A3Q9HC58 644 aa10.49□□□□□ -0.73
CPSF4-211ENST00000471455 ERAP1Q9NZ08 941 aa10.49□□□□□ -0.73
CPSF4-211ENST00000471455 NLRC5Q86WI3 1866 aa10.49□□□□□ -0.73
CPSF4-211ENST00000471455 KAT6AQ92794 2004 aa10.48□□□□□ -0.73
CPSF4-211ENST00000471455 REV3LO60673 3130 aa10.48□□□□□ -0.73
CPSF4-211ENST00000471455 M0QZ92 97 aa10.48□□□□□ -0.73
CPSF4-211ENST00000471455 PIK3CDO00329 1044 aa10.48□□□□□ -0.73
CPSF4-211ENST00000471455 DDAH1O94760 285 aa10.48□□□□□ -0.73
CPSF4-211ENST00000471455 GHRP10912 638 aa10.48□□□□□ -0.73
CPSF4-211ENST00000471455 SMARCA1P28370 1054 aa10.48□□□□□ -0.73
CPSF4-211ENST00000471455 BMPR1AP36894 532 aa10.48□□□□□ -0.73
CPSF4-211ENST00000471455 GNAQP50148 359 aa10.48□□□□□ -0.73
CPSF4-211ENST00000471455 MRPS9P82933 396 aaKnown RBP10.48□□□□□ -0.73
CPSF4-211ENST00000471455 SP4Q02446 784 aa10.48□□□□□ -0.73
CPSF4-211ENST00000471455 TROAPQ12815 778 aa10.48□□□□□ -0.73
CPSF4-211ENST00000471455 BTG3Q14201 252 aaPredicted RBP10.48□□□□□ -0.73
CPSF4-211ENST00000471455 FAM43BQ6ZT52 329 aaPredicted RBP10.48□□□□□ -0.73
CPSF4-211ENST00000471455 TRIM50Q86XT4 487 aa10.48□□□□□ -0.73
CPSF4-211ENST00000471455 SCUBE3Q8IX30 993 aa10.48□□□□□ -0.73
CPSF4-211ENST00000471455 GPRASP2Q96D09 838 aa10.48□□□□□ -0.73
CPSF4-211ENST00000471455 MAP3K14Q99558 947 aa10.48□□□□□ -0.73
CPSF4-211ENST00000471455 SPZ1Q9BXG8 430 aa10.48□□□□□ -0.73
CPSF4-211ENST00000471455 FTHL17Q9BXU8 183 aa10.48□□□□□ -0.73
CPSF4-211ENST00000471455 EHMT1Q9H9B1 1298 aa10.48□□□□□ -0.73
CPSF4-211ENST00000471455 RTEL1Q9NZ71 1219 aa10.48□□□□□ -0.73
CPSF4-211ENST00000471455 TUBE1Q9UJT0 475 aa10.48□□□□□ -0.73
CPSF4-211ENST00000471455 BAZ2BQ9UIF8 2168 aaKnown RBP10.48□□□□□ -0.73
CPSF4-211ENST00000471455 CYTH3O43739 400 aa10.47□□□□□ -0.73
CPSF4-211ENST00000471455 MMP1P03956 469 aa10.47□□□□□ -0.73
CPSF4-211ENST00000471455 TCF7P36402 384 aaPredicted RBP10.47□□□□□ -0.73
CPSF4-211ENST00000471455 ADAM17P78536 824 aa10.47□□□□□ -0.73
CPSF4-211ENST00000471455 SMAD4Q13485 552 aaKnown RBP10.47□□□□□ -0.73
CPSF4-211ENST00000471455 NAALADL2Q58DX5 795 aa10.47□□□□□ -0.73
CPSF4-211ENST00000471455 IER5Q5VY09 327 aa10.47□□□□□ -0.73
CPSF4-211ENST00000471455 TSHZ1Q6ZSZ6 1077 aa10.47□□□□□ -0.73
CPSF4-211ENST00000471455 SEPT1Q8WYJ6 367 aa10.47□□□□□ -0.73
CPSF4-211ENST00000471455 GLG1Q92896 1179 aa10.47□□□□□ -0.73
CPSF4-211ENST00000471455 CLP1Q92989 425 aaKnown RBP10.47□□□□□ -0.73
CPSF4-211ENST00000471455 MFSD14AQ96MC6 490 aa10.47□□□□□ -0.73
CPSF4-211ENST00000471455 SMARCAD1Q9H4L7 1026 aa10.47□□□□□ -0.73
CPSF4-211ENST00000471455 SLC27A5Q9Y2P5 690 aa10.47□□□□□ -0.73
CPSF4-211ENST00000471455 FSD2A1L4K1 749 aa10.46□□□□□ -0.73
CPSF4-211ENST00000471455 RRN3P2A6NIE6 340 aa10.46□□□□□ -0.73
CPSF4-211ENST00000471455 SPDYE3A6NKU9 549 aa10.46□□□□□ -0.73
CPSF4-211ENST00000471455 MAFGO15525 162 aa10.46□□□□□ -0.73
CPSF4-211ENST00000471455 NR1I2O75469 434 aa10.46□□□□□ -0.73
CPSF4-211ENST00000471455 ADH1BP00325 375 aa10.46□□□□□ -0.73
CPSF4-211ENST00000471455 CYP21A2P08686 494 aa10.46□□□□□ -0.73
CPSF4-211ENST00000471455 STAG3L1P0CL83 205 aa10.46□□□□□ -0.73
CPSF4-211ENST00000471455 SEMA3FQ13275 785 aa10.46□□□□□ -0.73
CPSF4-211ENST00000471455 SMAD2Q15796 467 aaKnown RBP10.46□□□□□ -0.73
CPSF4-211ENST00000471455 GRIK4Q16099 956 aa10.46□□□□□ -0.73
CPSF4-211ENST00000471455 CASC1Q6TDU7 716 aa10.46□□□□□ -0.73
CPSF4-211ENST00000471455 CMTR2Q8IYT2 770 aaKnown RBP10.46□□□□□ -0.73
CPSF4-211ENST00000471455 PIBF1Q8WXW3 757 aa10.46□□□□□ -0.73
CPSF4-211ENST00000471455 P2RX5Q93086 422 aa10.46□□□□□ -0.73
CPSF4-211ENST00000471455 MTA3Q9BTC8 594 aa10.46□□□□□ -0.73
CPSF4-211ENST00000471455 AZI2Q9H6S1 392 aa10.46□□□□□ -0.73
CPSF4-211ENST00000471455 CD207Q9UJ71 328 aa10.46□□□□□ -0.73
CPSF4-211ENST00000471455 SQORQ9Y6N5 450 aa10.46□□□□□ -0.73
CPSF4-211ENST00000471455 MYO7AQ13402 2215 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms