RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 ZNF536O15090 1300 aa4.84□□□□□ -1.63
COPS3-206ENST00000471414 RASSF10A6NK89 507 aa4.84□□□□□ -1.63
COPS3-206ENST00000471414 B4GALT4O60513 344 aa4.84□□□□□ -1.63
COPS3-206ENST00000471414 MAFO75444 373 aaPredicted RBP4.84□□□□□ -1.63
COPS3-206ENST00000471414 NPTXRO95502 500 aa4.84□□□□□ -1.63
COPS3-206ENST00000471414 KRT15P19012 456 aa4.84□□□□□ -1.63
COPS3-206ENST00000471414 TNFRSF1AP19438 455 aa4.84□□□□□ -1.63
COPS3-206ENST00000471414 SDHAP31040 664 aa4.84□□□□□ -1.63
COPS3-206ENST00000471414 MECP2P51608 486 aaKnown RBP4.84□□□□□ -1.63
COPS3-206ENST00000471414 IL13RA1P78552 427 aa4.84□□□□□ -1.63
COPS3-206ENST00000471414 KANK2Q63ZY3 851 aa4.84□□□□□ -1.63
COPS3-206ENST00000471414 OTOP1Q7RTM1 612 aa4.84□□□□□ -1.63
COPS3-206ENST00000471414 FGD2Q7Z6J4 655 aa4.84□□□□□ -1.63
COPS3-206ENST00000471414 LOXL4Q96JB6 756 aa4.84□□□□□ -1.63
COPS3-206ENST00000471414 AMNQ9BXJ7 453 aa4.84□□□□□ -1.63
COPS3-206ENST00000471414 INCENPQ9NQS7 918 aa4.84□□□□□ -1.63
COPS3-206ENST00000471414 CDK11AQ9UQ88 783 aaPredicted RBP4.84□□□□□ -1.63
COPS3-206ENST00000471414 PTPN22Q9Y2R2 807 aa4.84□□□□□ -1.63
COPS3-206ENST00000471414 COQ6Q9Y2Z9 468 aa4.84□□□□□ -1.63
COPS3-206ENST00000471414 B3GALT1Q9Y5Z6 326 aa4.84□□□□□ -1.63
COPS3-206ENST00000471414 NPEPPSL1A6NEC2 478 aa4.83□□□□□ -1.64
COPS3-206ENST00000471414 KCNK3O14649 394 aa4.83□□□□□ -1.64
COPS3-206ENST00000471414 PLD2O14939 933 aa4.83□□□□□ -1.64
COPS3-206ENST00000471414 MATN3O15232 486 aa4.83□□□□□ -1.64
COPS3-206ENST00000471414 ZNF888P0CJ79 500 aaPredicted RBP4.83□□□□□ -1.64
COPS3-206ENST00000471414 ZBTB48P10074 688 aaPredicted RBP4.83□□□□□ -1.64
COPS3-206ENST00000471414 MC4RP32245 332 aa4.83□□□□□ -1.64
COPS3-206ENST00000471414 ETV4P43268 484 aa4.83□□□□□ -1.64
COPS3-206ENST00000471414 DNM2P50570 870 aa4.83□□□□□ -1.64
COPS3-206ENST00000471414 SQSTM1Q13501 440 aa4.83□□□□□ -1.64
COPS3-206ENST00000471414 USP10Q14694 798 aaKnown RBP4.83□□□□□ -1.64
COPS3-206ENST00000471414 DPP8Q6V1X1 898 aaPredicted RBP4.83□□□□□ -1.64
COPS3-206ENST00000471414 GPR155Q7Z3F1 870 aa4.83□□□□□ -1.64
COPS3-206ENST00000471414 CIR1Q86X95 450 aaPredicted RBP4.83□□□□□ -1.64
COPS3-206ENST00000471414 CISD2Q8N5K1 135 aaKnown RBP4.83□□□□□ -1.64
COPS3-206ENST00000471414 PMFBP1Q8TBY8 1022 aa4.83□□□□□ -1.64
COPS3-206ENST00000471414 DVL3Q92997 716 aaPredicted RBP4.83□□□□□ -1.64
COPS3-206ENST00000471414 MAGEB10Q96LZ2 347 aaPredicted RBP4.83□□□□□ -1.64
COPS3-206ENST00000471414 BTBD2Q9BX70 525 aa4.83□□□□□ -1.64
COPS3-206ENST00000471414 ZDHHC5Q9C0B5 715 aa4.83□□□□□ -1.64
COPS3-206ENST00000471414 GALNT8Q9NY28 637 aa4.83□□□□□ -1.64
COPS3-206ENST00000471414 ST6GALNAC2Q9UJ37 374 aa4.83□□□□□ -1.64
COPS3-206ENST00000471414 ZDHHC9Q9Y397 364 aa4.83□□□□□ -1.64
COPS3-206ENST00000471414 TSC22D4Q9Y3Q8 395 aa4.83□□□□□ -1.64
COPS3-206ENST00000471414 INSRRP14616 1297 aa4.82□□□□□ -1.64
COPS3-206ENST00000471414 DUSP8Q13202 625 aa4.82□□□□□ -1.64
COPS3-206ENST00000471414 NFYCQ13952 458 aa4.82□□□□□ -1.64
COPS3-206ENST00000471414 EIF4HQ15056 248 aaKnown RBP4.82□□□□□ -1.64
COPS3-206ENST00000471414 CATSPEREQ5SY80 951 aa4.82□□□□□ -1.64
COPS3-206ENST00000471414 TRIM68Q6AZZ1 485 aa4.82□□□□□ -1.64
COPS3-206ENST00000471414 ASB15Q8WXK1 588 aa4.82□□□□□ -1.64
COPS3-206ENST00000471414 CLUHP3Q96NS8 147 aa4.82□□□□□ -1.64
COPS3-206ENST00000471414 DNAJC2Q99543 621 aaKnown RBP4.82□□□□□ -1.64
COPS3-206ENST00000471414 CARD11Q9BXL7 1154 aa4.82□□□□□ -1.64
COPS3-206ENST00000471414 KCNH7Q9NS40 1196 aa4.82□□□□□ -1.64
COPS3-206ENST00000471414 ARHGAP28Q9P2N2 729 aa4.82□□□□□ -1.64
COPS3-206ENST00000471414 ESYT3A0FGR9 886 aa4.81□□□□□ -1.64
COPS3-206ENST00000471414 PRAMEF25A6NGN4 478 aa4.81□□□□□ -1.64
COPS3-206ENST00000471414 MATN2O00339 956 aa4.81□□□□□ -1.64
COPS3-206ENST00000471414 MMEP08473 750 aa4.81□□□□□ -1.64
COPS3-206ENST00000471414 FNDC3BQ53EP0 1204 aaKnown RBP4.81□□□□□ -1.64
COPS3-206ENST00000471414 TMEM177Q53S58 311 aa4.81□□□□□ -1.64
COPS3-206ENST00000471414 TMEM200BQ69YZ2 307 aa4.81□□□□□ -1.64
COPS3-206ENST00000471414 Q8TCH9 128 aa4.81□□□□□ -1.64
COPS3-206ENST00000471414 CFHR4Q92496 578 aa4.81□□□□□ -1.64
COPS3-206ENST00000471414 FOXRED1Q96CU9 486 aaPredicted RBP4.81□□□□□ -1.64
COPS3-206ENST00000471414 GPR20Q99678 358 aa4.81□□□□□ -1.64
COPS3-206ENST00000471414 OR10A5Q9H207 317 aa4.81□□□□□ -1.64
COPS3-206ENST00000471414 FBXO10Q9UK96 956 aa4.81□□□□□ -1.64
COPS3-206ENST00000471414 ASB1Q9Y576 335 aa4.81□□□□□ -1.64
COPS3-206ENST00000471414 SCDO00767 359 aa4.8□□□□□ -1.64
COPS3-206ENST00000471414 FOXS1O43638 330 aa4.8□□□□□ -1.64
COPS3-206ENST00000471414 ECE1P42892 770 aa4.8□□□□□ -1.64
COPS3-206ENST00000471414 NFE2L2Q16236 605 aa4.8□□□□□ -1.64
COPS3-206ENST00000471414 RNF151Q2KHN1 245 aa4.8□□□□□ -1.64
COPS3-206ENST00000471414 TCTN3Q6NUS6 607 aa4.8□□□□□ -1.64
COPS3-206ENST00000471414 LRSAM1Q6UWE0 723 aa4.8□□□□□ -1.64
COPS3-206ENST00000471414 RTN4RL1Q86UN2 441 aaPredicted RBP4.8□□□□□ -1.64
COPS3-206ENST00000471414 IFNL2Q8IZJ0 200 aa4.8□□□□□ -1.64
COPS3-206ENST00000471414 BCL6BQ8N143 479 aaPredicted RBP4.8□□□□□ -1.64
COPS3-206ENST00000471414 IGSF22Q8N9C0 903 aa4.8□□□□□ -1.64
COPS3-206ENST00000471414 NEIL1Q96FI4 390 aaPredicted RBP4.8□□□□□ -1.64
COPS3-206ENST00000471414 SCYL1Q96KG9 808 aa4.8□□□□□ -1.64
COPS3-206ENST00000471414 KLC2Q9H0B6 622 aa4.8□□□□□ -1.64
COPS3-206ENST00000471414 KANSL2Q9H9L4 492 aa4.8□□□□□ -1.64
COPS3-206ENST00000471414 TMEM260Q9NX78 707 aa4.8□□□□□ -1.64
COPS3-206ENST00000471414 SLC12A8A0AV02 714 aa4.79□□□□□ -1.64
COPS3-206ENST00000471414 GOLGA6L22H0YM25 854 aa4.79□□□□□ -1.64
COPS3-206ENST00000471414 FOXP2O15409 715 aa4.79□□□□□ -1.64
COPS3-206ENST00000471414 DNAJC8O75937 253 aaPredicted RBP4.79□□□□□ -1.64
COPS3-206ENST00000471414 RAPGEF3O95398 923 aa4.79□□□□□ -1.64
COPS3-206ENST00000471414 SELENOPP49908 381 aa4.79□□□□□ -1.64
COPS3-206ENST00000471414 PUM1Q14671 1186 aaKnown RBP eCLIP4.79□□□□□ -1.64
COPS3-206ENST00000471414 TBR1Q16650 682 aa4.79□□□□□ -1.64
COPS3-206ENST00000471414 ZCCHC8Q6NZY4 707 aaKnown RBP4.79□□□□□ -1.64
COPS3-206ENST00000471414 CC2D1AQ6P1N0 951 aaPredicted RBP4.79□□□□□ -1.64
COPS3-206ENST00000471414 LARP4Q71RC2 724 aaKnown RBP eCLIP4.79□□□□□ -1.64
COPS3-206ENST00000471414 CHST13Q8NET6 341 aa4.79□□□□□ -1.64
COPS3-206ENST00000471414 GNRHR2Q96P88 292 aa4.79□□□□□ -1.64
COPS3-206ENST00000471414 LMF1Q96S06 567 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms