RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 GALNT17Q6IS24 598 aa15.31■□□□□ 0.04
HMGN1-211ENST00000471260 SP7Q8TDD2 431 aaPredicted RBP15.31■□□□□ 0.04
HMGN1-211ENST00000471260 SAMD11Q96NU1 681 aa15.31■□□□□ 0.04
HMGN1-211ENST00000471260 NCOA5Q9HCD5 579 aaKnown RBP15.31■□□□□ 0.04
HMGN1-211ENST00000471260 PDRG1Q9NUG6 133 aa15.31■□□□□ 0.04
HMGN1-211ENST00000471260 VPS54Q9P1Q0 977 aa15.31■□□□□ 0.04
HMGN1-211ENST00000471260 CHD7Q9P2D1 2997 aa15.3■□□□□ 0.04
HMGN1-211ENST00000471260 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.3■□□□□ 0.04
HMGN1-211ENST00000471260 LINC01553A4QN01 128 aa15.3■□□□□ 0.04
HMGN1-211ENST00000471260 EPOPA6NHQ4 379 aa15.3■□□□□ 0.04
HMGN1-211ENST00000471260 RFXAPO00287 272 aa15.3■□□□□ 0.04
HMGN1-211ENST00000471260 COL1A2P08123 1366 aa15.3■□□□□ 0.04
HMGN1-211ENST00000471260 GHRP10912 638 aa15.3■□□□□ 0.04
HMGN1-211ENST00000471260 VCANP13611 3396 aa15.3■□□□□ 0.04
HMGN1-211ENST00000471260 MRPS5P82675 430 aaKnown RBP15.3■□□□□ 0.04
HMGN1-211ENST00000471260 MRPS6P82932 125 aaKnown RBP15.3■□□□□ 0.04
HMGN1-211ENST00000471260 GRB10Q13322 594 aa15.3■□□□□ 0.04
HMGN1-211ENST00000471260 LPIN1Q14693 890 aa15.3■□□□□ 0.04
HMGN1-211ENST00000471260 PRR16Q569H4 304 aa15.3■□□□□ 0.04
HMGN1-211ENST00000471260 FBXO47Q5MNV8 452 aa15.3■□□□□ 0.04
HMGN1-211ENST00000471260 TSHZ1Q6ZSZ6 1077 aa15.3■□□□□ 0.04
HMGN1-211ENST00000471260 ATP8B4Q8TF62 1192 aa15.3■□□□□ 0.04
HMGN1-211ENST00000471260 YME1L1Q96TA2 773 aa15.3■□□□□ 0.04
HMGN1-211ENST00000471260 FTHL17Q9BXU8 183 aa15.3■□□□□ 0.04
HMGN1-211ENST00000471260 OSBPL7Q9BZF2 842 aa15.3■□□□□ 0.04
HMGN1-211ENST00000471260 UPF3BQ9BZI7 483 aaKnown RBP15.3■□□□□ 0.04
HMGN1-211ENST00000471260 ZNF302Q9NR11 478 aa15.3■□□□□ 0.04
HMGN1-211ENST00000471260 PCDHA10Q9Y5I2 948 aa15.3■□□□□ 0.04
HMGN1-211ENST00000471260 CDY2AQ9Y6F7 541 aa15.3■□□□□ 0.04
HMGN1-211ENST00000471260 SPTBN5Q9NRC6 3674 aaKnown RBP15.29■□□□□ 0.04
HMGN1-211ENST00000471260 KDM3AQ9Y4C1 1321 aa15.29■□□□□ 0.04
HMGN1-211ENST00000471260 DDX39AO00148 427 aaKnown RBP15.29■□□□□ 0.04
HMGN1-211ENST00000471260 ADAMTS3O15072 1205 aa15.29■□□□□ 0.04
HMGN1-211ENST00000471260 LPXNO60711 386 aa15.29■□□□□ 0.04
HMGN1-211ENST00000471260 CDKL5O76039 1030 aa15.29■□□□□ 0.04
HMGN1-211ENST00000471260 ZNF484Q5JVG2 852 aa15.29■□□□□ 0.04
HMGN1-211ENST00000471260 SWSAP1Q6NVH7 229 aa15.29■□□□□ 0.04
HMGN1-211ENST00000471260 FAM117BQ6P1L5 589 aa15.29■□□□□ 0.04
HMGN1-211ENST00000471260 PDXDC2PQ6P474 469 aa15.29■□□□□ 0.04
HMGN1-211ENST00000471260 MTHFD1LQ6UB35 978 aa15.29■□□□□ 0.04
HMGN1-211ENST00000471260 CCDC60Q8IWA6 550 aaPredicted RBP15.29■□□□□ 0.04
HMGN1-211ENST00000471260 DAGLBQ8NCG7 672 aa15.29■□□□□ 0.04
HMGN1-211ENST00000471260 RASGRP4Q8TDF6 673 aa15.29■□□□□ 0.04
HMGN1-211ENST00000471260 BBXQ8WY36 941 aaPredicted RBP15.29■□□□□ 0.04
HMGN1-211ENST00000471260 ASB2Q96Q27 587 aa15.29■□□□□ 0.04
HMGN1-211ENST00000471260 SUGCTQ9HAC7 445 aa15.29■□□□□ 0.04
HMGN1-211ENST00000471260 PCDHA4Q9UN74 947 aa15.29■□□□□ 0.04
HMGN1-211ENST00000471260 MAFBQ9Y5Q3 323 aaPredicted RBP15.29■□□□□ 0.04
HMGN1-211ENST00000471260 PRRC2BQ5JSZ5 2229 aaKnown RBP15.29■□□□□ 0.04
HMGN1-211ENST00000471260 PSAPP07602 524 aa15.28■□□□□ 0.04
HMGN1-211ENST00000471260 KLRC1P26715 233 aa15.28■□□□□ 0.04
HMGN1-211ENST00000471260 ANKRD1Q15327 319 aa15.28■□□□□ 0.04
HMGN1-211ENST00000471260 AAK1Q2M2I8 961 aa15.28■□□□□ 0.04
HMGN1-211ENST00000471260 MICALL1Q8N3F8 863 aa15.28■□□□□ 0.04
HMGN1-211ENST00000471260 LENG9Q96B70 501 aa15.28■□□□□ 0.04
HMGN1-211ENST00000471260 IL17RAQ96F46 866 aa15.28■□□□□ 0.04
HMGN1-211ENST00000471260 RIT2Q99578 217 aa15.28■□□□□ 0.04
HMGN1-211ENST00000471260 CELF4Q9BZC1 486 aaKnown RBP15.28■□□□□ 0.04
HMGN1-211ENST00000471260 FAM49AQ9H0Q0 323 aaPredicted RBP15.28■□□□□ 0.04
HMGN1-211ENST00000471260 PRDM6Q9NQX0 595 aa15.28■□□□□ 0.04
HMGN1-211ENST00000471260 COG5Q9UP83 839 aa15.28■□□□□ 0.04
HMGN1-211ENST00000471260 CEP131Q9UPN4 1083 aa15.28■□□□□ 0.04
HMGN1-211ENST00000471260 TRPV2Q9Y5S1 764 aa15.28■□□□□ 0.04
HMGN1-211ENST00000471260 CUL9Q8IWT3 2517 aa15.28■□□□□ 0.04
HMGN1-211ENST00000471260 COL4A6Q14031 1691 aa15.28■□□□□ 0.04
HMGN1-211ENST00000471260 IGSF9BQ9UPX0 1349 aa15.27■□□□□ 0.04
HMGN1-211ENST00000471260 ENPP3O14638 875 aa15.27■□□□□ 0.04
HMGN1-211ENST00000471260 PPFIA3O75145 1194 aa15.27■□□□□ 0.04
HMGN1-211ENST00000471260 XBP1P17861 261 aa15.27■□□□□ 0.04
HMGN1-211ENST00000471260 ODR4Q5SWX8 454 aa15.27■□□□□ 0.04
HMGN1-211ENST00000471260 MOXD1Q6UVY6 613 aa15.27■□□□□ 0.04
HMGN1-211ENST00000471260 BLIDQ8IZY5 108 aa15.27■□□□□ 0.04
HMGN1-211ENST00000471260 TBCKQ8TEA7 893 aa15.27■□□□□ 0.04
HMGN1-211ENST00000471260 FAM167AQ96KS9 214 aa15.27■□□□□ 0.04
HMGN1-211ENST00000471260 SLKQ9H2G2 1235 aaPredicted RBP15.27■□□□□ 0.04
HMGN1-211ENST00000471260 CYP3A7-CYP3A51PA0A087WV96 503 aa15.26■□□□□ 0.03
HMGN1-211ENST00000471260 WDR64B1ANS9 1081 aa15.26■□□□□ 0.03
HMGN1-211ENST00000471260 M0R2N6 131 aa15.26■□□□□ 0.03
HMGN1-211ENST00000471260 EDIL3O43854 480 aa15.26■□□□□ 0.03
HMGN1-211ENST00000471260 UPP2O95045 317 aa15.26■□□□□ 0.03
HMGN1-211ENST00000471260 ATP4AP20648 1035 aa15.26■□□□□ 0.03
HMGN1-211ENST00000471260 CYP3A7P24462 503 aa15.26■□□□□ 0.03
HMGN1-211ENST00000471260 SFNP31947 248 aa15.26■□□□□ 0.03
HMGN1-211ENST00000471260 STK3Q13188 491 aa15.26■□□□□ 0.03
HMGN1-211ENST00000471260 Q4G0T1 1027 aa15.26■□□□□ 0.03
HMGN1-211ENST00000471260 SPRED2Q7Z698 418 aa15.26■□□□□ 0.03
HMGN1-211ENST00000471260 CKAP2LQ8IYA6 745 aa15.26■□□□□ 0.03
HMGN1-211ENST00000471260 ZNF710Q8N1W2 664 aa15.26■□□□□ 0.03
HMGN1-211ENST00000471260 FBXO22Q8NEZ5 403 aa15.26■□□□□ 0.03
HMGN1-211ENST00000471260 RDM1Q8NG50 284 aa15.26■□□□□ 0.03
HMGN1-211ENST00000471260 GDPD5Q8WTR4 605 aa15.26■□□□□ 0.03
HMGN1-211ENST00000471260 TRAPPC12Q8WVT3 735 aa15.26■□□□□ 0.03
HMGN1-211ENST00000471260 AGO3Q9H9G7 860 aaKnown RBP15.26■□□□□ 0.03
HMGN1-211ENST00000471260 RWDD3Q9Y3V2 267 aa15.26■□□□□ 0.03
HMGN1-211ENST00000471260 SAMM50Q9Y512 469 aa15.26■□□□□ 0.03
HMGN1-211ENST00000471260 STK36Q9NRP7 1315 aa15.25■□□□□ 0.03
HMGN1-211ENST00000471260 SIP14410 1827 aa15.25■□□□□ 0.03
HMGN1-211ENST00000471260 MSH4O15457 936 aa15.25■□□□□ 0.03
HMGN1-211ENST00000471260 MAGEB2O15479 319 aa15.25■□□□□ 0.03
HMGN1-211ENST00000471260 PFKFB2O60825 505 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms