RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 UTP14CQ5TAP6 766 aaKnown RBP10.86□□□□□ -0.67
CCM2-204ENST00000470837 NT5DC1Q5TFE4 455 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 DYMQ7RTS9 669 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 KCNK18Q7Z418 384 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 EXOC8Q8IYI6 725 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 MLKLQ8NB16 471 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 ZNF296Q8WUU4 475 aaPredicted RBP10.86□□□□□ -0.67
CCM2-204ENST00000470837 EMID1Q96A84 441 aaPredicted RBP10.86□□□□□ -0.67
CCM2-204ENST00000470837 CEP170P1Q96L14 293 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 GPR20Q99678 358 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 TIPINQ9BVW5 301 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 SMARCAD1Q9H4L7 1026 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 FLRT1Q9NZU1 646 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 SEPT9Q9UHD8 586 aaPredicted RBP10.86□□□□□ -0.67
CCM2-204ENST00000470837 ZNF215Q9UL58 517 aaPredicted RBP10.86□□□□□ -0.67
CCM2-204ENST00000470837 GABRQQ9UN88 632 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 ZNF236Q9UL36 1845 aa10.86□□□□□ -0.67
CCM2-204ENST00000470837 GSTTP1A0A1W2PQM5 241 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 MYMKA6NI61 221 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 GOLGA6L19H0YKK7 550 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 DYNC1LI2O43237 492 aaPredicted RBP10.85□□□□□ -0.67
CCM2-204ENST00000470837 ADCY3O60266 1144 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 FAM13AO94988 1023 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 KIF20AO95235 890 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 HMGCRP04035 888 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 OATP04181 439 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 CYP11B2P19099 503 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 PPP1R2P41236 205 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 CPT1AP50416 773 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 PSMC6P62333 389 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 HSDL1Q3SXM5 330 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 ANO6Q4KMQ2 910 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 PRAMEF19Q5SWL8 479 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 L1TD1Q5T7N2 865 aaKnown RBP10.85□□□□□ -0.67
CCM2-204ENST00000470837 ISM2Q6H9L7 571 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 PADI6Q6TGC4 694 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 UNC13DQ70J99 1090 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 PLPPR4Q7Z2D5 763 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 CCDC60Q8IWA6 550 aaPredicted RBP10.85□□□□□ -0.67
CCM2-204ENST00000470837 AFAP1L1Q8TED9 768 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 AFG1LQ8WV93 481 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 COPS5Q92905 334 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 KATNBL1Q9H079 304 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 PANK4Q9NVE7 773 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 ERAP1Q9NZ08 941 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 MAN1B1Q9UKM7 699 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 Q9Y3F1 56 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 COL4A3BPQ9Y5P4 624 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 MAFBQ9Y5Q3 323 aaPredicted RBP10.85□□□□□ -0.67
CCM2-204ENST00000470837 PLXNB2O15031 1838 aa10.85□□□□□ -0.67
CCM2-204ENST00000470837 A0A087WWV3 80 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.84□□□□□ -0.67
CCM2-204ENST00000470837 ZEB2O60315 1214 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 PPFIA4O75335 1185 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 ZNF865P0CJ78 1059 aaPredicted RBP10.84□□□□□ -0.67
CCM2-204ENST00000470837 RARBP10826 455 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 GAP43P17677 238 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 CASP1P29466 404 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 SARSP49591 514 aaKnown RBP10.84□□□□□ -0.67
CCM2-204ENST00000470837 RARRES1P49788 294 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 ZNF165P49910 485 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 ARHGAP1Q07960 439 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 RAD51AP2Q09MP3 1159 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 PSMD2Q13200 908 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 UGCGQ16739 394 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 KMT5BQ4FZB7 885 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 HERC4Q5GLZ8 1057 aaPredicted RBP10.84□□□□□ -0.67
CCM2-204ENST00000470837 CT47A1Q5JQC4 288 aaPredicted RBP10.84□□□□□ -0.67
CCM2-204ENST00000470837 ZNF658Q5TYW1 1059 aaPredicted RBP10.84□□□□□ -0.67
CCM2-204ENST00000470837 RINT1Q6NUQ1 792 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 STXBP4Q6ZWJ1 553 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 TLK2Q86UE8 772 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 SLAIN1Q8ND83 568 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 SPATA20Q8TB22 786 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 FAM200AQ8TCP9 573 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 PXYLP1Q8TE99 480 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 SLC7A3Q8WY07 619 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 TRIB2Q92519 343 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 ANP32BQ92688 251 aaKnown RBP10.84□□□□□ -0.67
CCM2-204ENST00000470837 DRC1Q96MC2 740 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 MTRQ99707 1265 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 JPH2Q9BR39 696 aaPredicted RBP10.84□□□□□ -0.67
CCM2-204ENST00000470837 DNAJC25Q9H1X3 360 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 BCAS3Q9H6U6 928 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 WRAP73Q9P2S5 460 aaPredicted RBP10.84□□□□□ -0.67
CCM2-204ENST00000470837 ODF2LQ9ULJ1 636 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 TRPC6Q9Y210 931 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 PPME1Q9Y570 386 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 TRIM17Q9Y577 477 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 EMSYQ7Z589 1322 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 IGSF9BQ9UPX0 1349 aa10.84□□□□□ -0.67
CCM2-204ENST00000470837 IGKV6D-21A0A0A0MT36 114 aa10.83□□□□□ -0.68
CCM2-204ENST00000470837 SMTNL1A8MU46 457 aa10.83□□□□□ -0.68
CCM2-204ENST00000470837 USO1O60763 962 aaKnown RBP10.83□□□□□ -0.68
CCM2-204ENST00000470837 DUSP11O75319 330 aaKnown RBP10.83□□□□□ -0.68
CCM2-204ENST00000470837 LGR5O75473 907 aa10.83□□□□□ -0.68
CCM2-204ENST00000470837 DGAT1O75907 488 aa10.83□□□□□ -0.68
CCM2-204ENST00000470837 RHOBTB3O94955 611 aa10.83□□□□□ -0.68
CCM2-204ENST00000470837 PRKAR2AP13861 404 aaKnown RBP10.83□□□□□ -0.68
CCM2-204ENST00000470837 GUCY2CP25092 1073 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms