RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 R3HCC1Q9Y3T6 440 aaKnown RBP3.85□□□□□ -1.79
UBXN4-206ENST00000470687 PCDHA8Q9Y5H6 950 aa3.85□□□□□ -1.79
UBXN4-206ENST00000470687 WDR33Q9C0J8 1336 aaKnown RBP3.85□□□□□ -1.79
UBXN4-206ENST00000470687 MAP3K4Q9Y6R4 1608 aa3.84□□□□□ -1.79
UBXN4-206ENST00000470687 TSPOAP1O95153 1857 aa3.84□□□□□ -1.79
UBXN4-206ENST00000470687 GSG1L2A8MUP6 293 aa3.84□□□□□ -1.79
UBXN4-206ENST00000470687 DVL2O14641 736 aa3.84□□□□□ -1.79
UBXN4-206ENST00000470687 WNT9AO14904 365 aa3.84□□□□□ -1.79
UBXN4-206ENST00000470687 NKRFO15226 690 aaKnown RBP eCLIP3.84□□□□□ -1.79
UBXN4-206ENST00000470687 SGSM2O43147 1006 aa3.84□□□□□ -1.79
UBXN4-206ENST00000470687 CRTAMO95727 393 aa3.84□□□□□ -1.79
UBXN4-206ENST00000470687 FUCA1P04066 466 aa3.84□□□□□ -1.79
UBXN4-206ENST00000470687 CYP1A1P04798 512 aaPredicted RBP3.84□□□□□ -1.79
UBXN4-206ENST00000470687 PCBP1Q15365 356 aaKnown RBP eCLIP3.84□□□□□ -1.79
UBXN4-206ENST00000470687 PRAMEF18Q5VWM3 479 aa3.84□□□□□ -1.79
UBXN4-206ENST00000470687 SLFN13Q68D06 897 aa3.84□□□□□ -1.79
UBXN4-206ENST00000470687 ARHGEF18Q6ZSZ5 1173 aa3.84□□□□□ -1.79
UBXN4-206ENST00000470687 USP53Q70EK8 1073 aa3.84□□□□□ -1.79
UBXN4-206ENST00000470687 STRA8Q7Z7C7 330 aa3.84□□□□□ -1.79
UBXN4-206ENST00000470687 THNSL2Q86YJ6 484 aa3.84□□□□□ -1.79
UBXN4-206ENST00000470687 RBM12BQ8IXT5 1001 aaKnown RBP3.84□□□□□ -1.79
UBXN4-206ENST00000470687 Q8TCH9 128 aa3.84□□□□□ -1.79
UBXN4-206ENST00000470687 PTPN18Q99952 460 aa3.84□□□□□ -1.79
UBXN4-206ENST00000470687 JAM3Q9BX67 310 aa3.84□□□□□ -1.79
UBXN4-206ENST00000470687 MEGF9Q9H1U4 602 aa3.84□□□□□ -1.79
UBXN4-206ENST00000470687 JADE2Q9NQC1 790 aa3.84□□□□□ -1.79
UBXN4-206ENST00000470687 X6R8D5 127 aa3.84□□□□□ -1.79
UBXN4-206ENST00000470687 TTBK1Q5TCY1 1321 aaPredicted RBP3.84□□□□□ -1.79
UBXN4-206ENST00000470687 NEO1Q92859 1461 aa3.84□□□□□ -1.8
UBXN4-206ENST00000470687 KIAA0556O60303 1618 aa3.84□□□□□ -1.8
UBXN4-206ENST00000470687 CFAP43Q8NDM7 1665 aa3.84□□□□□ -1.8
UBXN4-206ENST00000470687 TRAF5O00463 557 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 NOP56O00567 594 aaKnown RBP3.83□□□□□ -1.8
UBXN4-206ENST00000470687 PLD2O14939 933 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 U2SURPO15042 1029 aaKnown RBP3.83□□□□□ -1.8
UBXN4-206ENST00000470687 RFPL3O75679 317 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 LTFP02788 710 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 ZBTB48P10074 688 aaPredicted RBP3.83□□□□□ -1.8
UBXN4-206ENST00000470687 PAMP19021 973 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 SEPHS1P49903 392 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 GYS2P54840 703 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 IFRD2Q12894 506 aaPredicted RBP3.83□□□□□ -1.8
UBXN4-206ENST00000470687 FOXE3Q13461 319 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 MIIPQ5JXC2 388 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 E4F1Q66K89 784 aaPredicted RBP3.83□□□□□ -1.8
UBXN4-206ENST00000470687 IGFL4Q6B9Z1 124 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 LHFPL2Q6ZUX7 228 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 OVCH1Q7RTY7 1134 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 RNF180Q86T96 592 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 FAM126BQ8IXS8 530 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 KBTBD2Q8IY47 623 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 FAM177A1Q8N128 213 aaPredicted RBP3.83□□□□□ -1.8
UBXN4-206ENST00000470687 KCTD13Q8WZ19 329 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 AP5M1Q9H0R1 490 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 TMEM168Q9H0V1 697 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 IPPKQ9H8X2 491 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 L2HGDHQ9H9P8 463 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 SMURF1Q9HCE7 757 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 GPR27Q9NS67 375 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 LRP2BPQ9P2M1 347 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 PCDHA2Q9Y5H9 948 aa3.83□□□□□ -1.8
UBXN4-206ENST00000470687 CTTNBP2Q8WZ74 1663 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 ZCCHC11Q5TAX3 1644 aaKnown RBP3.82□□□□□ -1.8
UBXN4-206ENST00000470687 ABCA8O94911 1581 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 ATP10BO94823 1461 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 MAGI2Q86UL8 1455 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 POGZQ7Z3K3 1410 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 NPHP3-ACAD11A0A0J9YXS1 232 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 NPHS1O60500 1241 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 TADA3O75528 432 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 CPP00450 1065 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 IL13P35225 146 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 LTBRP36941 435 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 STAT5AP42229 794 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 KCNJ6P48051 423 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 MASP1P48740 699 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 RBM10P98175 930 aaKnown RBP3.82□□□□□ -1.8
UBXN4-206ENST00000470687 ABHD18Q0P651 414 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 CR1LQ2VPA4 569 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 FNDC3BQ53EP0 1204 aaKnown RBP3.82□□□□□ -1.8
UBXN4-206ENST00000470687 POMZP3Q6PJE2 187 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 C16orf86Q6ZW13 317 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 PROSER1Q86XN7 944 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 DHX37Q8IY37 1157 aaKnown RBP3.82□□□□□ -1.8
UBXN4-206ENST00000470687 AMER2Q8N7J2 671 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 ZSWIM2Q8NEG5 633 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 DCAF4Q8WV16 495 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 DIO2Q92813 273 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 PTPRN2Q92932 1015 aa3.82□□□□□ -1.8
UBXN4-206ENST00000470687 TARS2Q9BW92 718 aaKnown RBP3.82□□□□□ -1.8
UBXN4-206ENST00000470687 MRPL4Q9BYD3 311 aaKnown RBP3.82□□□□□ -1.8
UBXN4-206ENST00000470687 TNPO3Q9Y5L0 923 aaKnown RBP3.82□□□□□ -1.8
UBXN4-206ENST00000470687 TRBV23OR9-2A0A075B6M9 112 aa3.81□□□□□ -1.8
UBXN4-206ENST00000470687 IQCA1LA6NCM1 817 aa3.81□□□□□ -1.8
UBXN4-206ENST00000470687 ACOT7O00154 380 aa3.81□□□□□ -1.8
UBXN4-206ENST00000470687 MEFVO15553 781 aaPredicted RBP3.81□□□□□ -1.8
UBXN4-206ENST00000470687 GLRX3O76003 335 aaKnown RBP3.81□□□□□ -1.8
UBXN4-206ENST00000470687 HMGB1P09429 215 aaKnown RBP3.81□□□□□ -1.8
UBXN4-206ENST00000470687 COL6A2P12110 1019 aa3.81□□□□□ -1.8
UBXN4-206ENST00000470687 MLLT6P55198 1093 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms