RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 DSCC1Q9BVC3 393 aa8.43□□□□□ -1.06
PTP4A1-202ENST00000470661 TCFL5Q9UL49 500 aa8.43□□□□□ -1.06
PTP4A1-202ENST00000470661 ZNF451Q9Y4E5 1061 aa8.43□□□□□ -1.06
PTP4A1-202ENST00000470661 ASTN2O75129 1339 aaPredicted RBP8.43□□□□□ -1.06
PTP4A1-202ENST00000470661 WDR90Q96KV7 1748 aa8.43□□□□□ -1.06
PTP4A1-202ENST00000470661 SSU72P8A0A1W2PR75 194 aa8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 CCER2I3L3R5 266 aa8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 NBPF7P0C2Y1 421 aaPredicted RBP8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 ZGLP1P0C6A0 271 aa8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 RPL10P27635 214 aaKnown RBP8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 PCBP3P57721 371 aaKnown RBP8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 ARID5AQ03989 594 aa8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 BBS9Q3SYG4 887 aa8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 TBC1D10BQ4KMP7 808 aaPredicted RBP8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 CRTC3Q6UUV7 619 aa8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 LMBR1LQ6UX01 489 aa8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 ZPBP2Q6X784 338 aa8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 RNF111Q6ZNA4 994 aa8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 CNTROBQ8N137 903 aa8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 FAM168AQ92567 244 aa8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 BRF1Q92994 677 aa8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 KAZALD1Q96I82 304 aa8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 SUCLG2Q96I99 432 aa8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 PUS3Q9BZE2 481 aaKnown RBP8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 GP6Q9HCN6 339 aa8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 EBF1Q9UH73 591 aa8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 JAG2Q9Y219 1238 aa8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 SLC12A7Q9Y666 1083 aa8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 CDHR2Q9BYE9 1310 aa8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 RTL9Q8NET4 1388 aa8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 DUOX1Q9NRD9 1551 aa8.42□□□□□ -1.06
PTP4A1-202ENST00000470661 SMAD7O15105 426 aaKnown RBP8.41□□□□□ -1.06
PTP4A1-202ENST00000470661 CBFA2T2O43439 604 aa8.41□□□□□ -1.06
PTP4A1-202ENST00000470661 CSF1RP07333 972 aa8.41□□□□□ -1.06
PTP4A1-202ENST00000470661 FGRP09769 529 aa8.41□□□□□ -1.06
PTP4A1-202ENST00000470661 TRHRP34981 398 aaPredicted RBP8.41□□□□□ -1.06
PTP4A1-202ENST00000470661 AFMP43652 599 aa8.41□□□□□ -1.06
PTP4A1-202ENST00000470661 ZNF445P59923 1031 aa8.41□□□□□ -1.06
PTP4A1-202ENST00000470661 SLC7A5Q01650 507 aa8.41□□□□□ -1.06
PTP4A1-202ENST00000470661 LDHDQ86WU2 507 aa8.41□□□□□ -1.06
PTP4A1-202ENST00000470661 ZSWIM9Q86XI8 627 aa8.41□□□□□ -1.06
PTP4A1-202ENST00000470661 TRMT2AQ8IZ69 625 aaKnown RBP8.41□□□□□ -1.06
PTP4A1-202ENST00000470661 SUPT20HQ8NEM7 779 aa8.41□□□□□ -1.06
PTP4A1-202ENST00000470661 KLHDC4Q8TBB5 520 aa8.41□□□□□ -1.06
PTP4A1-202ENST00000470661 KLHL6Q8WZ60 621 aa8.41□□□□□ -1.06
PTP4A1-202ENST00000470661 ASIC4Q96FT7 647 aa8.41□□□□□ -1.06
PTP4A1-202ENST00000470661 CCDC120Q96HB5 630 aa8.41□□□□□ -1.06
PTP4A1-202ENST00000470661 HAUS7Q99871 368 aa8.41□□□□□ -1.06
PTP4A1-202ENST00000470661 GLIS2Q9BZE0 524 aaPredicted RBP8.41□□□□□ -1.06
PTP4A1-202ENST00000470661 C9orf78Q9NZ63 289 aaPredicted RBP8.41□□□□□ -1.06
PTP4A1-202ENST00000470661 GPRC5DQ9NZD1 345 aa8.41□□□□□ -1.06
PTP4A1-202ENST00000470661 CNOT7Q9UIV1 285 aaKnown RBP8.41□□□□□ -1.06
PTP4A1-202ENST00000470661 NOB1Q9ULX3 412 aaKnown RBP8.41□□□□□ -1.06
PTP4A1-202ENST00000470661 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.41□□□□□ -1.06
PTP4A1-202ENST00000470661 TMEM82A0PJX8 343 aa8.4□□□□□ -1.06
PTP4A1-202ENST00000470661 IQCA1LA6NCM1 817 aa8.4□□□□□ -1.06
PTP4A1-202ENST00000470661 GRM8O00222 908 aa8.4□□□□□ -1.06
PTP4A1-202ENST00000470661 PAX4O43316 350 aa8.4□□□□□ -1.06
PTP4A1-202ENST00000470661 ETFBP38117 255 aa8.4□□□□□ -1.06
PTP4A1-202ENST00000470661 GRM1Q13255 1194 aa8.4□□□□□ -1.06
PTP4A1-202ENST00000470661 KCNMB1Q16558 191 aa8.4□□□□□ -1.06
PTP4A1-202ENST00000470661 NOL9Q5SY16 702 aaKnown RBP8.4□□□□□ -1.06
PTP4A1-202ENST00000470661 MCF2L2Q86YR7 1114 aa8.4□□□□□ -1.06
PTP4A1-202ENST00000470661 KIRREL1Q96J84 757 aa8.4□□□□□ -1.06
PTP4A1-202ENST00000470661 CHMP4AQ9BY43 222 aa8.4□□□□□ -1.06
PTP4A1-202ENST00000470661 SMC4Q9NTJ3 1288 aa8.4□□□□□ -1.06
PTP4A1-202ENST00000470661 RNF114Q9Y508 228 aa8.4□□□□□ -1.06
PTP4A1-202ENST00000470661 SCN9AQ15858 1988 aa8.4□□□□□ -1.06
PTP4A1-202ENST00000470661 SPEF2Q9C093 1822 aa8.4□□□□□ -1.07
PTP4A1-202ENST00000470661 PASKQ96RG2 1323 aa8.39□□□□□ -1.07
PTP4A1-202ENST00000470661 H0Y8X5 98 aa8.39□□□□□ -1.07
PTP4A1-202ENST00000470661 BCAR3O75815 825 aa8.39□□□□□ -1.07
PTP4A1-202ENST00000470661 RAC2P15153 192 aa8.39□□□□□ -1.07
PTP4A1-202ENST00000470661 CD247P20963 164 aa8.39□□□□□ -1.07
PTP4A1-202ENST00000470661 CCT4P50991 539 aaKnown RBP8.39□□□□□ -1.07
PTP4A1-202ENST00000470661 CHRNDQ07001 517 aa8.39□□□□□ -1.07
PTP4A1-202ENST00000470661 ANKRD39Q53RE8 183 aa8.39□□□□□ -1.07
PTP4A1-202ENST00000470661 PRAMEF18Q5VWM3 479 aa8.39□□□□□ -1.07
PTP4A1-202ENST00000470661 CST9Q5W186 159 aa8.39□□□□□ -1.07
PTP4A1-202ENST00000470661 VHLLQ6RSH7 139 aa8.39□□□□□ -1.07
PTP4A1-202ENST00000470661 CDC5LQ99459 802 aaKnown RBP8.39□□□□□ -1.07
PTP4A1-202ENST00000470661 PLA2G12BQ9BX93 195 aa8.39□□□□□ -1.07
PTP4A1-202ENST00000470661 BICC1Q9H694 974 aaKnown RBP8.39□□□□□ -1.07
PTP4A1-202ENST00000470661 ZNF408Q9H9D4 720 aa8.39□□□□□ -1.07
PTP4A1-202ENST00000470661 PCDHAC2Q9Y5I4 1007 aa8.39□□□□□ -1.07
PTP4A1-202ENST00000470661 XDHP47989 1333 aa8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 ANKRD18BA2A2Z9 1011 aa8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 HPXP02790 462 aa8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 EPHX1P07099 455 aa8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 IGHMBP2P38935 993 aaKnown RBP8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 IFIT5Q13325 482 aaKnown RBP8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 TNIP1Q15025 636 aa8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 LRRC24Q50LG9 513 aa8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 TIGD5Q53EQ6 642 aa8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 KIAA1211LQ6NV74 962 aa8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 FIBCD1Q8N539 461 aa8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 ANKRD44Q8N8A2 993 aa8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 ADCY4Q8NFM4 1077 aa8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 MYLIPQ8WY64 445 aa8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 DHX38Q92620 1227 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms