RNA–Protein interactions for RNA: ENST00000470280.1

LDHB-205, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-205ENST00000470280 B3GNT9Q6UX72 402 aa11.89□□□□□ -0.51
LDHB-205ENST00000470280 TMCO2Q7Z6W1 182 aaPredicted RBP11.89□□□□□ -0.51
LDHB-205ENST00000470280 DBF4BQ8NFT6 615 aa11.89□□□□□ -0.51
LDHB-205ENST00000470280 DNAJB3Q8WWF6 145 aa11.89□□□□□ -0.51
LDHB-205ENST00000470280 SLC39A7Q92504 469 aa11.89□□□□□ -0.51
LDHB-205ENST00000470280 WASF1Q92558 559 aa11.89□□□□□ -0.51
LDHB-205ENST00000470280 RIT2Q99578 217 aa11.89□□□□□ -0.51
LDHB-205ENST00000470280 TSPYL2Q9H2G4 693 aaPredicted RBP11.89□□□□□ -0.51
LDHB-205ENST00000470280 MTIF3Q9H2K0 278 aaKnown RBP11.89□□□□□ -0.51
LDHB-205ENST00000470280 UNC45AQ9H3U1 944 aa11.89□□□□□ -0.51
LDHB-205ENST00000470280 ZNF302Q9NR11 478 aa11.89□□□□□ -0.51
LDHB-205ENST00000470280 METRNQ9UJH8 293 aa11.89□□□□□ -0.51
LDHB-205ENST00000470280 PCDHA10Q9Y5I2 948 aa11.89□□□□□ -0.51
LDHB-205ENST00000470280 CHMP2AO43633 222 aa11.88□□□□□ -0.51
LDHB-205ENST00000470280 ZNF862O60290 1169 aa11.88□□□□□ -0.51
LDHB-205ENST00000470280 GAS7O60861 476 aa11.88□□□□□ -0.51
LDHB-205ENST00000470280 MMP1P03956 469 aa11.88□□□□□ -0.51
LDHB-205ENST00000470280 C7P10643 843 aa11.88□□□□□ -0.51
LDHB-205ENST00000470280 ACTN1P12814 892 aa11.88□□□□□ -0.51
LDHB-205ENST00000470280 ATP2A2P16615 1042 aaKnown RBP11.88□□□□□ -0.51
LDHB-205ENST00000470280 KRT2P35908 639 aa11.88□□□□□ -0.51
LDHB-205ENST00000470280 WDR5P61964 334 aaKnown RBP11.88□□□□□ -0.51
LDHB-205ENST00000470280 DEFB103AP81534 67 aa11.88□□□□□ -0.51
LDHB-205ENST00000470280 GUCY1B3Q02153 619 aa11.88□□□□□ -0.51
LDHB-205ENST00000470280 MGAT3Q09327 533 aa11.88□□□□□ -0.51
LDHB-205ENST00000470280 RABEP1Q15276 862 aa11.88□□□□□ -0.51
LDHB-205ENST00000470280 UGCGQ16739 394 aa11.88□□□□□ -0.51
LDHB-205ENST00000470280 FAM26DQ5JW98 314 aa11.88□□□□□ -0.51
LDHB-205ENST00000470280 FAM160B1Q5W0V3 765 aa11.88□□□□□ -0.51
LDHB-205ENST00000470280 CNKSR3Q6P9H4 555 aa11.88□□□□□ -0.51
LDHB-205ENST00000470280 MOXD1Q6UVY6 613 aa11.88□□□□□ -0.51
LDHB-205ENST00000470280 TRMT1LQ7Z2T5 733 aaKnown RBP11.88□□□□□ -0.51
LDHB-205ENST00000470280 NEK8Q86SG6 692 aa11.88□□□□□ -0.51
LDHB-205ENST00000470280 SMAP1Q8IYB5 467 aaPredicted RBP11.88□□□□□ -0.51
LDHB-205ENST00000470280 DIS3L2Q8IYB7 885 aaKnown RBP11.88□□□□□ -0.51
LDHB-205ENST00000470280 ATP8B4Q8TF62 1192 aa11.88□□□□□ -0.51
LDHB-205ENST00000470280 ZSCAN31Q96LW9 406 aaPredicted RBP11.88□□□□□ -0.51
LDHB-205ENST00000470280 TBC1D32Q96NH3 1257 aa11.88□□□□□ -0.51
LDHB-205ENST00000470280 NKX2-4Q9H2Z4 354 aa11.88□□□□□ -0.51
LDHB-205ENST00000470280 DISC1Q9NRI5 854 aa11.88□□□□□ -0.51
LDHB-205ENST00000470280 GABBR1Q9UBS5 961 aa11.88□□□□□ -0.51
LDHB-205ENST00000470280 DDX25Q9UHL0 483 aaKnown RBP11.88□□□□□ -0.51
LDHB-205ENST00000470280 MAFBQ9Y5Q3 323 aaPredicted RBP11.88□□□□□ -0.51
LDHB-205ENST00000470280 IGSF9BQ9UPX0 1349 aa11.87□□□□□ -0.51
LDHB-205ENST00000470280 RRN3P2A6NIE6 340 aa11.87□□□□□ -0.51
LDHB-205ENST00000470280 ATMINO43313 823 aaPredicted RBP11.87□□□□□ -0.51
LDHB-205ENST00000470280 HBP1O60381 514 aa11.87□□□□□ -0.51
LDHB-205ENST00000470280 CAND2O75155 1236 aa11.87□□□□□ -0.51
LDHB-205ENST00000470280 ARHGEF15O94989 841 aa11.87□□□□□ -0.51
LDHB-205ENST00000470280 PARNO95453 639 aaKnown RBP11.87□□□□□ -0.51
LDHB-205ENST00000470280 PSAPP07602 524 aa11.87□□□□□ -0.51
LDHB-205ENST00000470280 SLC26A2P50443 739 aa11.87□□□□□ -0.51
LDHB-205ENST00000470280 GRIN2CQ14957 1233 aa11.87□□□□□ -0.51
LDHB-205ENST00000470280 PLEKHG4Q58EX7 1191 aa11.87□□□□□ -0.51
LDHB-205ENST00000470280 PPP4R3AQ6IN85 833 aa11.87□□□□□ -0.51
LDHB-205ENST00000470280 TAF2Q6P1X5 1199 aa11.87□□□□□ -0.51
LDHB-205ENST00000470280 MTHFD1LQ6UB35 978 aa11.87□□□□□ -0.51
LDHB-205ENST00000470280 RPAINQ86UA6 219 aa11.87□□□□□ -0.51
LDHB-205ENST00000470280 HAS1Q92839 578 aa11.87□□□□□ -0.51
LDHB-205ENST00000470280 TIFAQ96CG3 184 aa11.87□□□□□ -0.51
LDHB-205ENST00000470280 CDX2Q99626 313 aaPredicted RBP11.87□□□□□ -0.51
LDHB-205ENST00000470280 LLPHQ9BRT6 129 aaKnown RBP11.87□□□□□ -0.51
LDHB-205ENST00000470280 TEKT3Q9BXF9 490 aa11.87□□□□□ -0.51
LDHB-205ENST00000470280 FAM49AQ9H0Q0 323 aaPredicted RBP11.87□□□□□ -0.51
LDHB-205ENST00000470280 ZNF576Q9H609 170 aa11.87□□□□□ -0.51
LDHB-205ENST00000470280 KCNMB3Q9NPA1 279 aa11.87□□□□□ -0.51
LDHB-205ENST00000470280 SAMM50Q9Y512 469 aa11.87□□□□□ -0.51
LDHB-205ENST00000470280 CHD9Q3L8U1 2897 aa11.87□□□□□ -0.51
LDHB-205ENST00000470280 WDR64B1ANS9 1081 aa11.86□□□□□ -0.51
LDHB-205ENST00000470280 EML1O00423 815 aa11.86□□□□□ -0.51
LDHB-205ENST00000470280 CCNT1O60563 726 aaKnown RBP11.86□□□□□ -0.51
LDHB-205ENST00000470280 BAIAP3O94812 1187 aa11.86□□□□□ -0.51
LDHB-205ENST00000470280 GHRP10912 638 aa11.86□□□□□ -0.51
LDHB-205ENST00000470280 KLRC1P26715 233 aa11.86□□□□□ -0.51
LDHB-205ENST00000470280 TMEM62Q0P6H9 643 aa11.86□□□□□ -0.51
LDHB-205ENST00000470280 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.86□□□□□ -0.515e-14■□□□□ 10.7
LDHB-205ENST00000470280 HERC6Q8IVU3 1022 aa11.86□□□□□ -0.51
LDHB-205ENST00000470280 SLC9A7Q96T83 725 aa11.86□□□□□ -0.51
LDHB-205ENST00000470280 SH2B1Q9NRF2 756 aaPredicted RBP11.86□□□□□ -0.51
LDHB-205ENST00000470280 VAV3Q9UKW4 847 aa11.86□□□□□ -0.51
LDHB-205ENST00000470280 PCDHA2Q9Y5H9 948 aa11.86□□□□□ -0.51
LDHB-205ENST00000470280 GTF3C3Q9Y5Q9 886 aa11.86□□□□□ -0.51
LDHB-205ENST00000470280 CDY2AQ9Y6F7 541 aa11.86□□□□□ -0.51
LDHB-205ENST00000470280 TMEM265A0A087WTH1 108 aa11.85□□□□□ -0.51
LDHB-205ENST00000470280 SMIM35A0A1B0GVV1 85 aa11.85□□□□□ -0.51
LDHB-205ENST00000470280 ABHD14A-ACY1A0A1B0GW23 586 aa11.85□□□□□ -0.51
LDHB-205ENST00000470280 TMEM150BA6NC51 233 aa11.85□□□□□ -0.51
LDHB-205ENST00000470280 STBD1O95210 358 aa11.85□□□□□ -0.51
LDHB-205ENST00000470280 C22orf31O95567 290 aa11.85□□□□□ -0.51
LDHB-205ENST00000470280 GCFC2P16383 781 aaKnown RBP11.85□□□□□ -0.51
LDHB-205ENST00000470280 JAK3P52333 1124 aa11.85□□□□□ -0.51
LDHB-205ENST00000470280 MRPS6P82932 125 aaKnown RBP11.85□□□□□ -0.51
LDHB-205ENST00000470280 PRKCEQ02156 737 aa11.85□□□□□ -0.51
LDHB-205ENST00000470280 LPIN1Q14693 890 aa11.85□□□□□ -0.51
LDHB-205ENST00000470280 RAB30Q15771 203 aa11.85□□□□□ -0.51
LDHB-205ENST00000470280 ZNF484Q5JVG2 852 aa11.85□□□□□ -0.51
LDHB-205ENST00000470280 MIER3Q7Z3K6 550 aa11.85□□□□□ -0.51
LDHB-205ENST00000470280 SPRED2Q7Z698 418 aa11.85□□□□□ -0.51
LDHB-205ENST00000470280 CKAP2LQ8IYA6 745 aa11.85□□□□□ -0.51
LDHB-205ENST00000470280 PHOSPHO2Q8TCD6 241 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms