RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 USP17L18D6R9N7 530 aa17.02■□□□□ 0.31
BRAT1-204ENST00000469750 USP17L22D6RA61 530 aa17.02■□□□□ 0.31
BRAT1-204ENST00000469750 USP17L17D6RBQ6 530 aa17.02■□□□□ 0.31
BRAT1-204ENST00000469750 USP17L19D6RCP7 530 aa17.02■□□□□ 0.31
BRAT1-204ENST00000469750 USP17L20D6RJB6 530 aa17.02■□□□□ 0.31
BRAT1-204ENST00000469750 NMT2O60551 498 aa17.02■□□□□ 0.31
BRAT1-204ENST00000469750 USP17L24Q0WX57 530 aa17.02■□□□□ 0.31
BRAT1-204ENST00000469750 DARS2Q6PI48 645 aaKnown RBP17.02■□□□□ 0.31
BRAT1-204ENST00000469750 USP17L6PQ6QN14 398 aa17.02■□□□□ 0.31
BRAT1-204ENST00000469750 SKA2Q8WVK7 121 aaPredicted RBP17.02■□□□□ 0.31
BRAT1-204ENST00000469750 RAVER2Q9HCJ3 691 aaKnown RBP17.02■□□□□ 0.31
BRAT1-204ENST00000469750 CPSF3Q9UKF6 684 aaKnown RBP17.02■□□□□ 0.31
BRAT1-204ENST00000469750 ABT1Q9ULW3 272 aaKnown RBP17.02■□□□□ 0.31
BRAT1-204ENST00000469750 FAM196BA6NMK8 535 aa17.01■□□□□ 0.31
BRAT1-204ENST00000469750 USP17L10C9JJH3 530 aa17.01■□□□□ 0.31
BRAT1-204ENST00000469750 ATP8B1O43520 1251 aa17.01■□□□□ 0.31
BRAT1-204ENST00000469750 ORC2Q13416 577 aaPredicted RBP17.01■□□□□ 0.31
BRAT1-204ENST00000469750 SH2D4BQ5SQS7 431 aa17.01■□□□□ 0.31
BRAT1-204ENST00000469750 ARHGEF18Q6ZSZ5 1173 aa17.01■□□□□ 0.31
BRAT1-204ENST00000469750 RAPH1Q70E73 1250 aa17.01■□□□□ 0.31
BRAT1-204ENST00000469750 DNAAF3Q8N9W5 541 aa17.01■□□□□ 0.31
BRAT1-204ENST00000469750 C2orf54Q08AI8 447 aa17.01■□□□□ 0.31
BRAT1-204ENST00000469750 PHLDB3Q6NSJ2 640 aa17.01■□□□□ 0.31
BRAT1-204ENST00000469750 HDAC11Q96DB2 347 aa17.01■□□□□ 0.31
BRAT1-204ENST00000469750 FAM49AQ9H0Q0 323 aaPredicted RBP17.01■□□□□ 0.31
BRAT1-204ENST00000469750 ATP8A1Q9Y2Q0 1164 aa17.01■□□□□ 0.31
BRAT1-204ENST00000469750 USP31Q70CQ4 1352 aa17.01■□□□□ 0.31
BRAT1-204ENST00000469750 CYP4F22Q6NT55 531 aa17.01■□□□□ 0.31
BRAT1-204ENST00000469750 CATSPER4Q7RTX7 472 aa17.01■□□□□ 0.31
BRAT1-204ENST00000469750 ABCB11O95342 1321 aa17.01■□□□□ 0.31
BRAT1-204ENST00000469750 MFAP3LO75121 409 aa17.01■□□□□ 0.31
BRAT1-204ENST00000469750 BRD2P25440 801 aaKnown RBP17.01■□□□□ 0.31
BRAT1-204ENST00000469750 TRIM28Q13263 835 aaKnown RBP17.01■□□□□ 0.31
BRAT1-204ENST00000469750 LLGL1Q15334 1064 aa17.01■□□□□ 0.31
BRAT1-204ENST00000469750 GPC4O75487 556 aa17■□□□□ 0.31
BRAT1-204ENST00000469750 S100BP04271 92 aaPredicted RBP17■□□□□ 0.31
BRAT1-204ENST00000469750 ARPP19P56211 112 aa17■□□□□ 0.31
BRAT1-204ENST00000469750 BASP1P80723 227 aaKnown RBP17■□□□□ 0.31
BRAT1-204ENST00000469750 KRT76Q01546 638 aa17■□□□□ 0.31
BRAT1-204ENST00000469750 SNRNP48Q6IEG0 339 aaKnown RBP17■□□□□ 0.31
BRAT1-204ENST00000469750 TRPM1Q7Z4N2 1603 aa17■□□□□ 0.31
BRAT1-204ENST00000469750 ZMYND10O75800 440 aa17■□□□□ 0.31
BRAT1-204ENST00000469750 ASPHQ12797 758 aa17■□□□□ 0.31
BRAT1-204ENST00000469750 RHOT2Q8IXI1 618 aa17■□□□□ 0.31
BRAT1-204ENST00000469750 THNSL1Q8IYQ7 743 aa17■□□□□ 0.31
BRAT1-204ENST00000469750 NSUN6Q8TEA1 469 aaKnown RBP17■□□□□ 0.31
BRAT1-204ENST00000469750 SMYD2Q9NRG4 433 aa17■□□□□ 0.31
BRAT1-204ENST00000469750 ADAMTS1Q9UHI8 967 aa17■□□□□ 0.31
BRAT1-204ENST00000469750 CAPN7Q9Y6W3 813 aa17■□□□□ 0.31
BRAT1-204ENST00000469750 CRB1P82279 1406 aa17■□□□□ 0.31
BRAT1-204ENST00000469750 GPSM2P81274 684 aa17■□□□□ 0.31
BRAT1-204ENST00000469750 SATB1Q01826 763 aa17■□□□□ 0.31
BRAT1-204ENST00000469750 ZNF667Q5HYK9 610 aa17■□□□□ 0.31
BRAT1-204ENST00000469750 SFR1Q86XK3 245 aa17■□□□□ 0.31
BRAT1-204ENST00000469750 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17■□□□□ 0.31
BRAT1-204ENST00000469750 SCINQ9Y6U3 715 aa17■□□□□ 0.31
BRAT1-204ENST00000469750 GSG1L2A8MUP6 293 aa17■□□□□ 0.31
BRAT1-204ENST00000469750 FOXO4P98177 505 aa17■□□□□ 0.31
BRAT1-204ENST00000469750 PADI6Q6TGC4 694 aa17■□□□□ 0.31
BRAT1-204ENST00000469750 KSR1Q8IVT5 923 aa17■□□□□ 0.31
BRAT1-204ENST00000469750 PROM2Q8N271 834 aa17■□□□□ 0.31
BRAT1-204ENST00000469750 RAD54LQ92698 747 aa17■□□□□ 0.31
BRAT1-204ENST00000469750 MSH2P43246 934 aa16.99■□□□□ 0.31
BRAT1-204ENST00000469750 DSTYKQ6XUX3 929 aa16.99■□□□□ 0.31
BRAT1-204ENST00000469750 ERICH1Q86X53 443 aa16.99■□□□□ 0.31
BRAT1-204ENST00000469750 NEK9Q8TD19 979 aa16.99■□□□□ 0.31
BRAT1-204ENST00000469750 OXER1Q8TDS5 423 aa16.99■□□□□ 0.31
BRAT1-204ENST00000469750 KIAA1586Q9HCI6 787 aa16.99■□□□□ 0.31
BRAT1-204ENST00000469750 PVALEFA0A1B0GWK0 134 aa16.99■□□□□ 0.31
BRAT1-204ENST00000469750 IFNAR2P48551 515 aa16.99■□□□□ 0.31
BRAT1-204ENST00000469750 RNF146Q9NTX7 359 aa16.99■□□□□ 0.31
BRAT1-204ENST00000469750 SUN1O94901 812 aa16.99■□□□□ 0.31
BRAT1-204ENST00000469750 ANXA13P27216 316 aa16.99■□□□□ 0.31
BRAT1-204ENST00000469750 TRIM42Q8IWZ5 723 aa16.99■□□□□ 0.31
BRAT1-204ENST00000469750 C2orf69Q8N8R5 385 aa16.99■□□□□ 0.31
BRAT1-204ENST00000469750 RNF139Q8WU17 664 aa16.99■□□□□ 0.31
BRAT1-204ENST00000469750 PRKAG2Q9UGJ0 569 aa16.99■□□□□ 0.31
BRAT1-204ENST00000469750 RNF17Q9BXT8 1623 aaKnown RBP16.99■□□□□ 0.31
BRAT1-204ENST00000469750 NRKQ7Z2Y5 1582 aa16.99■□□□□ 0.31
BRAT1-204ENST00000469750 SH3BGRP55822 239 aaPredicted RBP16.99■□□□□ 0.31
BRAT1-204ENST00000469750 DHX9Q08211 1270 aaKnown RBP16.99■□□□□ 0.31
BRAT1-204ENST00000469750 RYBPQ8N488 228 aaPredicted RBP16.99■□□□□ 0.31
BRAT1-204ENST00000469750 FAM84BQ96KN1 310 aaPredicted RBP16.99■□□□□ 0.31
BRAT1-204ENST00000469750 KRT3P12035 628 aa16.98■□□□□ 0.31
BRAT1-204ENST00000469750 SLMAPQ14BN4 828 aa16.98■□□□□ 0.31
BRAT1-204ENST00000469750 RAB44Q7Z6P3 723 aaPredicted RBP16.98■□□□□ 0.31
BRAT1-204ENST00000469750 XXYLT1Q8NBI6 393 aa16.98■□□□□ 0.31
BRAT1-204ENST00000469750 BARHL2Q9NY43 387 aa16.98■□□□□ 0.31
BRAT1-204ENST00000469750 F5H6K3 240 aa16.98■□□□□ 0.31
BRAT1-204ENST00000469750 CLDN3O15551 220 aa16.98■□□□□ 0.31
BRAT1-204ENST00000469750 HIP1RO75146 1068 aa16.98■□□□□ 0.31
BRAT1-204ENST00000469750 KLRC3Q07444 240 aa16.98■□□□□ 0.31
BRAT1-204ENST00000469750 MAPK6Q16659 721 aa16.98■□□□□ 0.31
BRAT1-204ENST00000469750 SP8Q8IXZ3 490 aa16.98■□□□□ 0.31
BRAT1-204ENST00000469750 SPATS2LQ9NUQ6 558 aaKnown RBP16.98■□□□□ 0.31
BRAT1-204ENST00000469750 DNAJC12Q9UKB3 198 aa16.98■□□□□ 0.31
BRAT1-204ENST00000469750 E9PMD0 336 aa16.98■□□□□ 0.31
BRAT1-204ENST00000469750 WDR46O15213 610 aaKnown RBP16.98■□□□□ 0.31
BRAT1-204ENST00000469750 NR3C1P04150 777 aa16.98■□□□□ 0.31
BRAT1-204ENST00000469750 CDC27P30260 824 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms