RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 HYOU1Q9Y4L1 999 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 MKI67P46013 3256 aaKnown RBP10.56□□□□□ -0.72
HDAC3-205ENST00000469550 BICDL2A1A5D9 508 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 TRIM49BA6NDI0 452 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 FAM196BA6NMK8 535 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 USP17L5A8MUK1 530 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 B4DLN1 442 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 PRDM1O75626 825 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 ECM2O94769 699 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-205ENST00000469550 FARP2O94887 1054 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-205ENST00000469550 INHAP05111 366 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 FGRP09769 529 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 PAFAH1B1P43034 410 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 PMS1P54277 932 aaKnown RBP10.56□□□□□ -0.72
HDAC3-205ENST00000469550 RRP1BQ14684 758 aaKnown RBP10.56□□□□□ -0.72
HDAC3-205ENST00000469550 PLCB4Q15147 1175 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 CCDC84Q86UT8 332 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-205ENST00000469550 IQCKQ8N0W5 287 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 OTUD6BQ8N6M0 293 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 ANKRD13CQ8N6S4 541 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 ENAHQ8N8S7 591 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-205ENST00000469550 SH3RF3Q8TEJ3 882 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-205ENST00000469550 HDAC7Q8WUI4 952 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 COA7Q96BR5 231 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 ALS2CR12Q96Q35 445 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 OSBPL9Q96SU4 736 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 CRISPLD2Q9H0B8 497 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 EHD4Q9H223 541 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 PRO3102Q9H379 93 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 CUEDC2Q9H467 287 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 MAGEF1Q9HAY2 307 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 AS3MTQ9HBK9 375 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 DISC1Q9NRI5 854 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 KBTBD4Q9NVX7 518 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 LRP2BPQ9P2M1 347 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 PI4KBQ9UBF8 816 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 MORF4L1Q9UBU8 362 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 BIN2Q9UBW5 565 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-205ENST00000469550 PLAGL2Q9UPG8 496 aa10.56□□□□□ -0.72
HDAC3-205ENST00000469550 ALPK3Q96L96 1907 aa10.55□□□□□ -0.72
HDAC3-205ENST00000469550 PJA2O43164 708 aa10.55□□□□□ -0.72
HDAC3-205ENST00000469550 BAG3O95817 575 aa10.55□□□□□ -0.72
HDAC3-205ENST00000469550 CCNE1P24864 410 aa10.55□□□□□ -0.72
HDAC3-205ENST00000469550 SPP2Q13103 211 aa10.55□□□□□ -0.72
HDAC3-205ENST00000469550 COBLL1Q53SF7 1204 aa10.55□□□□□ -0.72
HDAC3-205ENST00000469550 NAALADL2Q58DX5 795 aa10.55□□□□□ -0.72
HDAC3-205ENST00000469550 FBXW10Q5XX13 1052 aa10.55□□□□□ -0.72
HDAC3-205ENST00000469550 HAUS3Q68CZ6 603 aa10.55□□□□□ -0.72
HDAC3-205ENST00000469550 IFT20Q8IY31 132 aa10.55□□□□□ -0.72
HDAC3-205ENST00000469550 TSEN2Q8NCE0 465 aaKnown RBP10.55□□□□□ -0.72
HDAC3-205ENST00000469550 ARL8AQ96BM9 186 aa10.55□□□□□ -0.72
HDAC3-205ENST00000469550 RRP36Q96EU6 259 aaKnown RBP10.55□□□□□ -0.72
HDAC3-205ENST00000469550 DUSP9Q99956 384 aaKnown RBP10.55□□□□□ -0.72
HDAC3-205ENST00000469550 CCSER1Q9C0I3 900 aa10.55□□□□□ -0.72
HDAC3-205ENST00000469550 EPN3Q9H201 632 aa10.55□□□□□ -0.72
HDAC3-205ENST00000469550 CXorf56Q9H5V9 222 aa10.55□□□□□ -0.72
HDAC3-205ENST00000469550 MAPK8IP1Q9UQF2 711 aa10.55□□□□□ -0.72
HDAC3-205ENST00000469550 PCDHA13Q9Y5I0 950 aa10.55□□□□□ -0.72
HDAC3-205ENST00000469550 DUSP10Q9Y6W6 482 aa10.55□□□□□ -0.72
HDAC3-205ENST00000469550 DDX60LQ5H9U9 1706 aaKnown RBP10.55□□□□□ -0.72
HDAC3-205ENST00000469550 MYH1P12882 1939 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 MACROD2A1Z1Q3 448 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 ZNF263O14978 683 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 PLEKHA8P1O95397 391 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 ASNSP08243 561 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 ELNP15502 786 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 CALML3P27482 149 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 DRP2Q13474 957 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 SKIDA1Q1XH10 827 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 IFIT1BQ5T764 474 aaKnown RBP10.54□□□□□ -0.72
HDAC3-205ENST00000469550 RNF10Q8N5U6 811 aaKnown RBP10.54□□□□□ -0.72
HDAC3-205ENST00000469550 CSGALNACT2Q8N6G5 542 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.54□□□□□ -0.721e-6■■■■■ 48.1
HDAC3-205ENST00000469550 IFIH1Q9BYX4 1025 aaKnown RBP10.54□□□□□ -0.72
HDAC3-205ENST00000469550 ASCC2Q9H1I8 757 aaPredicted RBP10.54□□□□□ -0.72
HDAC3-205ENST00000469550 GDF3Q9NR23 364 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 LRWD1Q9UFC0 647 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 CAPN7Q9Y6W3 813 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 CNTNAP5Q8WYK1 1306 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 PES1O00541 588 aaKnown RBP10.54□□□□□ -0.72
HDAC3-205ENST00000469550 SCG2P13521 617 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 FLT1P17948 1338 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 HOXA7P31268 230 aaPredicted RBP10.54□□□□□ -0.72
HDAC3-205ENST00000469550 MCM7P33993 719 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 BRCA2P51587 3418 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 HMGCS2P54868 508 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 NAP1L1P55209 391 aaKnown RBP10.54□□□□□ -0.72
HDAC3-205ENST00000469550 CYP27A1Q02318 531 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 PFKFB3Q16875 520 aaPredicted RBP10.54□□□□□ -0.72
HDAC3-205ENST00000469550 CCDC96Q2M329 555 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 FKBP15Q5T1M5 1219 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 CCDC181Q5TID7 509 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 PIK3AP1Q6ZUJ8 805 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 IQCA1Q86XH1 822 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 EIF1ADQ8N9N8 165 aaKnown RBP10.54□□□□□ -0.72
HDAC3-205ENST00000469550 C3orf20Q8ND61 904 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 DPF3Q92784 378 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 P2RX5Q93086 422 aa10.54□□□□□ -0.72
HDAC3-205ENST00000469550 CCDC47Q96A33 483 aaKnown RBP10.54□□□□□ -0.72
HDAC3-205ENST00000469550 ZIM3Q96PE6 472 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms