RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 TNMDQ9H2S6 317 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 PDGFCQ9NRA1 345 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 WRAP73Q9P2S5 460 aaPredicted RBP9.14□□□□□ -0.95
NPHP3-204ENST00000469232 SERTAD1Q9UHV2 236 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 GABRQQ9UN88 632 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 GNEQ9Y223 722 aaKnown RBP9.14□□□□□ -0.95
NPHP3-204ENST00000469232 Q9Y3F1 56 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 PCDHA10Q9Y5I2 948 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 IGSF9BQ9UPX0 1349 aa9.14□□□□□ -0.95
NPHP3-204ENST00000469232 SUPT20HL2P0C7V6 817 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 CYBAP13498 195 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 HOXD10P28358 340 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 CCT6AP40227 531 aaKnown RBP9.13□□□□□ -0.95
NPHP3-204ENST00000469232 QARSP47897 775 aaKnown RBP9.13□□□□□ -0.95
NPHP3-204ENST00000469232 PRKCZQ05513 592 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 LAMC2Q13753 1193 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 ARHGEF6Q15052 776 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 ZSCAN23Q3MJ62 389 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 NCAPH2Q6IBW4 605 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 MIER3Q7Z3K6 550 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 ZNF296Q8WUU4 475 aaPredicted RBP9.13□□□□□ -0.95
NPHP3-204ENST00000469232 RAD54LQ92698 747 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 PCYT2Q99447 389 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 C7orf25Q9BPX7 421 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 ZSWIM4Q9H7M6 989 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 RGL1Q9NZL6 768 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 DBR1Q9UK59 544 aaKnown RBP9.13□□□□□ -0.95
NPHP3-204ENST00000469232 TELO2Q9Y4R8 837 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 MAFBQ9Y5Q3 323 aaPredicted RBP9.13□□□□□ -0.95
NPHP3-204ENST00000469232 LOXHD1Q8IVV2 1947 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 EMSYQ7Z589 1322 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 FRMD3A2A2Y4 597 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 HRO43593 1189 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 ZNF862O60290 1169 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 EYA4O95677 639 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 GGPS1O95749 300 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 TXNP10599 105 aaKnown RBP9.13□□□□□ -0.95
NPHP3-204ENST00000469232 SMPD1P17405 629 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 CYP2B6P20813 491 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 STAT6P42226 847 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 SLC12A3P55017 1021 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 PSMC5P62195 406 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 EHHADHQ08426 723 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 DPYDQ12882 1025 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 LY6KQ17RY6 165 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 TMEM63BQ5T3F8 832 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 CYFIP1Q7L576 1253 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 PDILTQ8N807 584 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 SYT2Q8N9I0 419 aaPredicted RBP9.13□□□□□ -0.95
NPHP3-204ENST00000469232 CNNM3Q8NE01 707 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 TRPV1Q8NER1 839 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 CD99L2Q8TCZ2 262 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 SEPT1Q8WYJ6 367 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 TRIB2Q92519 343 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 LARP4BQ92615 738 aaKnown RBP9.13□□□□□ -0.95
NPHP3-204ENST00000469232 DHX58Q96C10 678 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 DYDC2Q96IM9 177 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 NACC1Q96RE7 527 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 GPR20Q99678 358 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 ANKEF1Q9NU02 776 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 KIAA1468Q9P260 1216 aa9.13□□□□□ -0.95
NPHP3-204ENST00000469232 DOCK5Q9H7D0 1870 aa9.12□□□□□ -0.95
NPHP3-204ENST00000469232 A6NJR5 290 aa9.12□□□□□ -0.95
NPHP3-204ENST00000469232 ADCY6O43306 1168 aa9.12□□□□□ -0.95
NPHP3-204ENST00000469232 KLRC4O43908 158 aa9.12□□□□□ -0.95
NPHP3-204ENST00000469232 DKC1O60832 514 aaKnown RBP eCLIP9.12□□□□□ -0.95
NPHP3-204ENST00000469232 GH1P01241 217 aa9.12□□□□□ -0.95
NPHP3-204ENST00000469232 PSAPP07602 524 aa9.12□□□□□ -0.95
NPHP3-204ENST00000469232 ADCYAP1R1P41586 468 aa9.12□□□□□ -0.95
NPHP3-204ENST00000469232 POSTNQ15063 836 aa9.12□□□□□ -0.95
NPHP3-204ENST00000469232 CCDC144BQ3MJ40 725 aa9.12□□□□□ -0.95
NPHP3-204ENST00000469232 MIS18BP1Q6P0N0 1132 aa9.12□□□□□ -0.95
NPHP3-204ENST00000469232 PLPPR4Q7Z2D5 763 aa9.12□□□□□ -0.95
NPHP3-204ENST00000469232 CEP57L1Q8IYX8 460 aa9.12□□□□□ -0.95
NPHP3-204ENST00000469232 PPTC7Q8NI37 304 aa9.12□□□□□ -0.95
NPHP3-204ENST00000469232 DNAJC19Q96DA6 116 aa9.12□□□□□ -0.95
NPHP3-204ENST00000469232 CCDC34Q96HJ3 373 aa9.12□□□□□ -0.95
NPHP3-204ENST00000469232 UIMC1Q96RL1 719 aa9.12□□□□□ -0.95
NPHP3-204ENST00000469232 CEP89Q96ST8 783 aa9.12□□□□□ -0.95
NPHP3-204ENST00000469232 LXNQ9BS40 222 aa9.12□□□□□ -0.95
NPHP3-204ENST00000469232 PANK2Q9BZ23 570 aa9.12□□□□□ -0.95
NPHP3-204ENST00000469232 TRIM9Q9C026 710 aa9.12□□□□□ -0.95
NPHP3-204ENST00000469232 UPF3AQ9H1J1 476 aaKnown RBP9.12□□□□□ -0.95
NPHP3-204ENST00000469232 KCND2Q9NZV8 630 aa9.12□□□□□ -0.95
NPHP3-204ENST00000469232 KIAA1024Q9UPX6 916 aa9.12□□□□□ -0.95
NPHP3-204ENST00000469232 ARIH1Q9Y4X5 557 aaPredicted RBP9.12□□□□□ -0.95
NPHP3-204ENST00000469232 PPME1Q9Y570 386 aa9.12□□□□□ -0.95
NPHP3-204ENST00000469232 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.11□□□□□ -0.95
NPHP3-204ENST00000469232 FOXN1O15353 648 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 PPFIA4O75335 1185 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 PLA2G4BP0C869 781 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 CYP11B2P19099 503 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 ATP4AP20648 1035 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 CYP2C19P33261 490 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 SLC26A2P50443 739 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 PSMC6P62333 389 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 KCNB1Q14721 858 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 TARBP2Q15633 366 aaKnown RBP9.11□□□□□ -0.95
NPHP3-204ENST00000469232 UGCGQ16739 394 aa9.11□□□□□ -0.95
NPHP3-204ENST00000469232 HSDL1Q3SXM5 330 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms