RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 RPA1P27694 616 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 CDC25AP30304 524 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 QARSP47897 775 aaKnown RBP9.08□□□□□ -0.96
HDAC6-216ENST00000468949 PRKCEQ02156 737 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 FAM160A1Q05DH4 1040 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 SPIRE1Q08AE8 756 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 CTTNQ14247 550 aaKnown RBP9.08□□□□□ -0.96
HDAC6-216ENST00000468949 KARSQ15046 597 aaKnown RBP9.08□□□□□ -0.96
HDAC6-216ENST00000468949 IL17AQ16552 155 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 HSDL1Q3SXM5 330 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 GNASQ5JWF2 1037 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 AXDND1Q5T1B0 1012 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-216ENST00000468949 SWSAP1Q6NVH7 229 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 POTEBQ6S5H4 581 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 SHC4Q6S5L8 630 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 OTUD6AQ7L8S5 288 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 TRMT1LQ7Z2T5 733 aaKnown RBP9.08□□□□□ -0.96
HDAC6-216ENST00000468949 IQUBQ8NA54 791 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 PCSK9Q8NBP7 692 aaKnown RBP9.08□□□□□ -0.96
HDAC6-216ENST00000468949 SYAP1Q96A49 352 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-216ENST00000468949 DHX58Q96C10 678 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 EPSTI1Q96J88 318 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 PLIN2Q99541 437 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 GPR20Q99678 358 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 POLR3CQ9BUI4 534 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-216ENST00000468949 CCSER1Q9C0I3 900 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 SMARCAD1Q9H4L7 1026 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 DDX19AQ9NUU7 478 aaKnown RBP9.08□□□□□ -0.96
HDAC6-216ENST00000468949 STK17AQ9UEE5 414 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 SEPT9Q9UHD8 586 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-216ENST00000468949 OGDHLQ9ULD0 1010 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 KCNH3Q9ULD8 1083 aa9.08□□□□□ -0.96
HDAC6-216ENST00000468949 GNEQ9Y223 722 aaKnown RBP9.08□□□□□ -0.96
HDAC6-216ENST00000468949 EMSYQ7Z589 1322 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 ALPK3Q96L96 1907 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 ARHGEF35A5YM69 484 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 TTLL13PA6NNM8 815 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 POLR2DO15514 142 aaKnown RBP9.07□□□□□ -0.96
HDAC6-216ENST00000468949 GADD45BO75293 160 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-216ENST00000468949 PGK1P00558 417 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 LGALS2P05162 132 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 KRT18P05783 430 aaKnown RBP9.07□□□□□ -0.96
HDAC6-216ENST00000468949 ZNF286BP0CG31 522 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 PLCG1P19174 1290 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 TIE1P35590 1138 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 SLC26A2P50443 739 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 STAT5BP51692 787 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 NDUFA8P51970 172 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 GJA9P57773 515 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 BEX3Q00994 111 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 POTEGQ6S5H5 508 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 ABHD15Q6UXT9 468 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 NECAB2Q7Z6G3 386 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 CCDC60Q8IWA6 550 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-216ENST00000468949 KCTD17Q8N5Z5 321 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 ARRDC4Q8NCT1 418 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 CNNM3Q8NE01 707 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 DIS3LQ8TF46 1054 aaKnown RBP9.07□□□□□ -0.96
HDAC6-216ENST00000468949 VTI1AQ96AJ9 217 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 NACC1Q96RE7 527 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 LRRC27Q9C0I9 530 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 CUEDC2Q9H467 287 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 MAGEF1Q9HAY2 307 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 BMP2KQ9NSY1 1161 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-216ENST00000468949 ERAP1Q9NZ08 941 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 RGL1Q9NZL6 768 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 USP25Q9UHP3 1055 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 KIAA1024Q9UPX6 916 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 DNM3Q9UQ16 869 aa9.07□□□□□ -0.96
HDAC6-216ENST00000468949 IGSF9BQ9UPX0 1349 aa9.06□□□□□ -0.96
HDAC6-216ENST00000468949 ADCY6O43306 1168 aa9.06□□□□□ -0.96
HDAC6-216ENST00000468949 PPFIA4O75335 1185 aa9.06□□□□□ -0.96
HDAC6-216ENST00000468949 MED24O75448 989 aa9.06□□□□□ -0.96
HDAC6-216ENST00000468949 OATP04181 439 aa9.06□□□□□ -0.96
HDAC6-216ENST00000468949 PTGS1P23219 599 aa9.06□□□□□ -0.96
HDAC6-216ENST00000468949 YWHABP31946 246 aaKnown RBP9.06□□□□□ -0.96
HDAC6-216ENST00000468949 AMPD3Q01432 767 aa9.06□□□□□ -0.96
HDAC6-216ENST00000468949 DHX8Q14562 1220 aaKnown RBP9.06□□□□□ -0.96
HDAC6-216ENST00000468949 NFKBIBQ15653 356 aa9.06□□□□□ -0.96
HDAC6-216ENST00000468949 SKOR2Q2VWA4 1001 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-216ENST00000468949 XKR3Q5GH77 459 aa9.06□□□□□ -0.96
HDAC6-216ENST00000468949 KANK3Q6NY19 840 aa9.06□□□□□ -0.96
HDAC6-216ENST00000468949 PLPPR4Q7Z2D5 763 aa9.06□□□□□ -0.96
HDAC6-216ENST00000468949 CATSPER3Q86XQ3 398 aa9.06□□□□□ -0.96
HDAC6-216ENST00000468949 TRIM50Q86XT4 487 aa9.06□□□□□ -0.96
HDAC6-216ENST00000468949 LARP4BQ92615 738 aaKnown RBP9.06□□□□□ -0.96
HDAC6-216ENST00000468949 PAWRQ96IZ0 340 aaKnown RBP9.06□□□□□ -0.96
HDAC6-216ENST00000468949 MTG1Q9BT17 334 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-216ENST00000468949 PANK2Q9BZ23 570 aa9.06□□□□□ -0.96
HDAC6-216ENST00000468949 UPF3AQ9H1J1 476 aaKnown RBP9.06□□□□□ -0.96
HDAC6-216ENST00000468949 GOLPH3LQ9H4A5 285 aa9.06□□□□□ -0.96
HDAC6-216ENST00000468949 NRBP2Q9NSY0 501 aa9.06□□□□□ -0.96
HDAC6-216ENST00000468949 LMBRD1Q9NUN5 540 aa9.06□□□□□ -0.96
HDAC6-216ENST00000468949 GSTTP1A0A1W2PQM5 241 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 MOXD2PA6NHM9 499 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 A6NJR5 290 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 H3BRB1 525 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 DNM1LO00429 736 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 LGR5O75473 907 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 CABYRO75952 493 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms