RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 MAMDC4Q6UXC1 1216 aa16.66■□□□□ 0.26
CRAMP1-206ENST00000468839 CYFIP1Q7L576 1253 aa16.66■□□□□ 0.26
CRAMP1-206ENST00000468839 NOC3LQ8WTT2 800 aaKnown RBP16.66■□□□□ 0.26
CRAMP1-206ENST00000468839 ATP6V0A1Q93050 837 aa16.66■□□□□ 0.26
CRAMP1-206ENST00000468839 TIPINQ9BVW5 301 aa16.66■□□□□ 0.26
CRAMP1-206ENST00000468839 GABBR1Q9UBS5 961 aa16.66■□□□□ 0.26
CRAMP1-206ENST00000468839 SEL1LQ9UBV2 794 aa16.66■□□□□ 0.26
CRAMP1-206ENST00000468839 CPA4Q9UI42 421 aa16.66■□□□□ 0.26
CRAMP1-206ENST00000468839 ABT1Q9ULW3 272 aaKnown RBP16.66■□□□□ 0.26
CRAMP1-206ENST00000468839 SYNGAP1Q96PV0 1343 aa16.66■□□□□ 0.26
CRAMP1-206ENST00000468839 RBM47A0AV96 593 aaKnown RBP16.65■□□□□ 0.26
CRAMP1-206ENST00000468839 CBFA2T2O43439 604 aa16.65■□□□□ 0.26
CRAMP1-206ENST00000468839 TLR2O60603 784 aa16.65■□□□□ 0.26
CRAMP1-206ENST00000468839 FARP2O94887 1054 aaPredicted RBP16.65■□□□□ 0.26
CRAMP1-206ENST00000468839 KIF20AO95235 890 aa16.65■□□□□ 0.26
CRAMP1-206ENST00000468839 CDK11BP21127 795 aaKnown RBP16.65■□□□□ 0.26
CRAMP1-206ENST00000468839 YWHABP31946 246 aaKnown RBP16.65■□□□□ 0.26
CRAMP1-206ENST00000468839 ZNF131P52739 623 aa16.65■□□□□ 0.26
CRAMP1-206ENST00000468839 ARMCX2Q7L311 632 aa16.65■□□□□ 0.26
CRAMP1-206ENST00000468839 OTUD6AQ7L8S5 288 aa16.65■□□□□ 0.26
CRAMP1-206ENST00000468839 MYOCDQ8IZQ8 938 aa16.65■□□□□ 0.26
CRAMP1-206ENST00000468839 DUSP9Q99956 384 aaKnown RBP16.65■□□□□ 0.26
CRAMP1-206ENST00000468839 ZFYVE28Q9HCC9 887 aa16.65■□□□□ 0.26
CRAMP1-206ENST00000468839 VTA1Q9NP79 307 aa16.65■□□□□ 0.26
CRAMP1-206ENST00000468839 IFNKQ9P0W0 207 aa16.65■□□□□ 0.26
CRAMP1-206ENST00000468839 GSTTP1A0A1W2PQM5 241 aa16.64■□□□□ 0.25
CRAMP1-206ENST00000468839 LRRC10BA6NIK2 292 aa16.64■□□□□ 0.25
CRAMP1-206ENST00000468839 ZNF862O60290 1169 aa16.64■□□□□ 0.25
CRAMP1-206ENST00000468839 PMS1P54277 932 aaKnown RBP16.64■□□□□ 0.25
CRAMP1-206ENST00000468839 UBASH3AP57075 661 aa16.64■□□□□ 0.25
CRAMP1-206ENST00000468839 CACNB1Q02641 598 aaPredicted RBP16.64■□□□□ 0.25
CRAMP1-206ENST00000468839 SPAG1Q07617 926 aa16.64■□□□□ 0.25
CRAMP1-206ENST00000468839 RAD51AP2Q09MP3 1159 aa16.64■□□□□ 0.25
CRAMP1-206ENST00000468839 CELF3Q5SZQ8 465 aaKnown RBP16.64■□□□□ 0.25
CRAMP1-206ENST00000468839 ANKRD40Q6AI12 368 aa16.64■□□□□ 0.25
CRAMP1-206ENST00000468839 SWSAP1Q6NVH7 229 aa16.64■□□□□ 0.25
CRAMP1-206ENST00000468839 PADI6Q6TGC4 694 aa16.64■□□□□ 0.25
CRAMP1-206ENST00000468839 METTL7BQ6UX53 244 aa16.64■□□□□ 0.25
CRAMP1-206ENST00000468839 DPP9Q86TI2 863 aa16.64■□□□□ 0.25
CRAMP1-206ENST00000468839 MSL3Q8N5Y2 521 aaKnown RBP16.64■□□□□ 0.25
CRAMP1-206ENST00000468839 XPO4Q9C0E2 1151 aaKnown RBP16.64■□□□□ 0.25
CRAMP1-206ENST00000468839 SEMA6BQ9H3T3 888 aa16.64■□□□□ 0.25
CRAMP1-206ENST00000468839 THAP9Q9H5L6 903 aa16.64■□□□□ 0.25
CRAMP1-206ENST00000468839 OLFML3Q9NRN5 406 aa16.64■□□□□ 0.25
CRAMP1-206ENST00000468839 SLC5A4Q9NY91 659 aa16.64■□□□□ 0.25
CRAMP1-206ENST00000468839 MAFBQ9Y5Q3 323 aaPredicted RBP16.64■□□□□ 0.25
CRAMP1-206ENST00000468839 IGSF9BQ9UPX0 1349 aa16.64■□□□□ 0.25
CRAMP1-206ENST00000468839 SRCAPQ6ZRS2 3230 aa16.64■□□□□ 0.25
CRAMP1-206ENST00000468839 TRIM49BA6NDI0 452 aa16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 GOLGA6L6A8MZA4 724 aa16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 RSPH10B2B2RC85 870 aa16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 TBCAO75347 108 aaKnown RBP16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 FAM13AO94988 1023 aa16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 ARIH2O95376 493 aa16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 GGPS1O95749 300 aa16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 SERPINC1P01008 464 aa16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 RSPH10BP0C881 870 aa16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 LRRC63Q05C16 580 aa16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 TTLL4Q14679 1199 aa16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 LY6KQ17RY6 165 aa16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 MORN1Q5T089 497 aa16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 EPM2AIP1Q7L775 607 aaPredicted RBP16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 EEPD1Q7L9B9 569 aa16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 SFR1Q86XK3 245 aa16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 CCDC60Q8IWA6 550 aaPredicted RBP16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 SCFD2Q8WU76 684 aa16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 SEPT1Q8WYJ6 367 aa16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 TRIM44Q96DX7 344 aaPredicted RBP16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 CTAGE1Q96RT6 745 aa16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 PARVGQ9HBI0 331 aa16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 LIMA1Q9UHB6 759 aaKnown RBP16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 TELO2Q9Y4R8 837 aa16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 KAT6AQ92794 2004 aa16.63■□□□□ 0.25
CRAMP1-206ENST00000468839 MAPTP10636 758 aaKnown RBP16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 MAPK7Q13164 816 aa16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 IRF5Q13568 498 aa16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 LRRC41Q15345 812 aa16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 BMT2Q1RMZ1 405 aa16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 XKR9Q5GH70 373 aa16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 XKR3Q5GH77 459 aa16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 TAPT1Q6NXT6 567 aa16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 ANO5Q75V66 913 aa16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 APTXQ7Z2E3 356 aaKnown RBP16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 IRF2BP1Q8IU81 584 aa16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 FBXO16Q8IX29 292 aaPredicted RBP16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 GLIS3Q8NEA6 775 aa16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 ZNF507Q8TCN5 953 aa16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 AFAP1L1Q8TED9 768 aa16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 MAML3Q96JK9 1138 aa16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 TRIM47Q96LD4 638 aa16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 NAP1L5Q96NT1 182 aaPredicted RBP16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 SRRTQ9BXP5 876 aaKnown RBP16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 KATNBL1Q9H079 304 aa16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 ZHX3Q9H4I2 956 aa16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 MLXIPQ9HAP2 919 aa16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 ZNF302Q9NR11 478 aa16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.62■□□□□ 0.25
CRAMP1-206ENST00000468839 EIF3DO15371 548 aaKnown RBP eCLIP16.61■□□□□ 0.25
CRAMP1-206ENST00000468839 CA12O43570 354 aa16.61■□□□□ 0.25
CRAMP1-206ENST00000468839 HIP1RO75146 1068 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms