RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 TANC1Q9C0D5 1861 aa16.65■□□□□ 0.26
TMEM39A-205ENST00000468676 DKC1O60832 514 aaKnown RBP eCLIP16.65■□□□□ 0.26
TMEM39A-205ENST00000468676 FGBP02675 491 aa16.65■□□□□ 0.26
TMEM39A-205ENST00000468676 THPOP40225 353 aa16.65■□□□□ 0.26
TMEM39A-205ENST00000468676 EPHB4P54760 987 aa16.65■□□□□ 0.26
TMEM39A-205ENST00000468676 SHHQ15465 462 aa16.65■□□□□ 0.26
TMEM39A-205ENST00000468676 TMEM240Q5SV17 173 aa16.65■□□□□ 0.26
TMEM39A-205ENST00000468676 MARCH8Q5T0T0 291 aa16.65■□□□□ 0.26
TMEM39A-205ENST00000468676 MCTP1Q6DN14 999 aa16.65■□□□□ 0.26
TMEM39A-205ENST00000468676 VAV3Q9UKW4 847 aa16.65■□□□□ 0.26
TMEM39A-205ENST00000468676 PCDHA12Q9UN75 941 aa16.65■□□□□ 0.26
TMEM39A-205ENST00000468676 ACTN1P12814 892 aa16.64■□□□□ 0.25
TMEM39A-205ENST00000468676 ATP2B1P20020 1258 aa16.64■□□□□ 0.25
TMEM39A-205ENST00000468676 ATP4AP20648 1035 aa16.64■□□□□ 0.25
TMEM39A-205ENST00000468676 MCM7P33993 719 aa16.64■□□□□ 0.25
TMEM39A-205ENST00000468676 IGBP1P78318 339 aa16.64■□□□□ 0.25
TMEM39A-205ENST00000468676 TTC38Q5R3I4 469 aa16.64■□□□□ 0.25
TMEM39A-205ENST00000468676 ZNF365Q70YC5 407 aa16.64■□□□□ 0.25
TMEM39A-205ENST00000468676 C16orf59Q7L2K0 433 aa16.64■□□□□ 0.25
TMEM39A-205ENST00000468676 HSCBQ8IWL3 235 aa16.64■□□□□ 0.25
TMEM39A-205ENST00000468676 WNT8BQ93098 351 aa16.64■□□□□ 0.25
TMEM39A-205ENST00000468676 RNPC3Q96LT9 517 aaKnown RBP16.64■□□□□ 0.25
TMEM39A-205ENST00000468676 MTMR9Q96QG7 549 aa16.64■□□□□ 0.25
TMEM39A-205ENST00000468676 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.64■□□□□ 0.257e-8■■■■□ 20.4
TMEM39A-205ENST00000468676 PCDHA2Q9Y5H9 948 aa16.64■□□□□ 0.25
TMEM39A-205ENST00000468676 RSPH10B2B2RC85 870 aa16.63■□□□□ 0.25
TMEM39A-205ENST00000468676 KIF28PB7ZC32 967 aa16.63■□□□□ 0.25
TMEM39A-205ENST00000468676 OATP04181 439 aa16.63■□□□□ 0.25
TMEM39A-205ENST00000468676 RSPH10BP0C881 870 aa16.63■□□□□ 0.25
TMEM39A-205ENST00000468676 ACRP10323 421 aa16.63■□□□□ 0.25
TMEM39A-205ENST00000468676 PSMC5P62195 406 aa16.63■□□□□ 0.25
TMEM39A-205ENST00000468676 EPHA7Q15375 998 aa16.63■□□□□ 0.25
TMEM39A-205ENST00000468676 RILPL1Q5EBL4 403 aa16.63■□□□□ 0.25
TMEM39A-205ENST00000468676 XKR3Q5GH77 459 aa16.63■□□□□ 0.25
TMEM39A-205ENST00000468676 C9orf50Q5SZB4 431 aa16.63■□□□□ 0.25
TMEM39A-205ENST00000468676 ZNF618Q5T7W0 954 aa16.63■□□□□ 0.25
TMEM39A-205ENST00000468676 NME8Q8N427 588 aa16.63■□□□□ 0.25
TMEM39A-205ENST00000468676 HERVK_113Q902F9 699 aa16.63■□□□□ 0.25
TMEM39A-205ENST00000468676 FTOQ9C0B1 505 aaKnown RBP eCLIP16.63■□□□□ 0.25
TMEM39A-205ENST00000468676 TTC12Q9H892 705 aaPredicted RBP16.63■□□□□ 0.25
TMEM39A-205ENST00000468676 SCN5AQ14524 2016 aa16.63■□□□□ 0.25
TMEM39A-205ENST00000468676 LAMA2P24043 3122 aaKnown RBP16.62■□□□□ 0.25
TMEM39A-205ENST00000468676 SMIM35A0A1B0GVV1 85 aa16.62■□□□□ 0.25
TMEM39A-205ENST00000468676 WNT7AO00755 349 aa16.62■□□□□ 0.25
TMEM39A-205ENST00000468676 MAGEB2O15479 319 aa16.62■□□□□ 0.25
TMEM39A-205ENST00000468676 ZNF862O60290 1169 aa16.62■□□□□ 0.25
TMEM39A-205ENST00000468676 CXCL10P02778 98 aa16.62■□□□□ 0.25
TMEM39A-205ENST00000468676 P4HBP07237 508 aaKnown RBP16.62■□□□□ 0.25
TMEM39A-205ENST00000468676 KLRC1P26715 233 aa16.62■□□□□ 0.25
TMEM39A-205ENST00000468676 TXKP42681 527 aa16.62■□□□□ 0.25
TMEM39A-205ENST00000468676 QARSP47897 775 aaKnown RBP16.62■□□□□ 0.25
TMEM39A-205ENST00000468676 PRKCEQ02156 737 aa16.62■□□□□ 0.25
TMEM39A-205ENST00000468676 ZNF174Q15697 407 aa16.62■□□□□ 0.25
TMEM39A-205ENST00000468676 FAM26DQ5JW98 314 aa16.62■□□□□ 0.25
TMEM39A-205ENST00000468676 NCAPH2Q6IBW4 605 aa16.62■□□□□ 0.25
TMEM39A-205ENST00000468676 MTHFD1LQ6UB35 978 aa16.62■□□□□ 0.25
TMEM39A-205ENST00000468676 DEFB128Q7Z7B8 93 aa16.62■□□□□ 0.25
TMEM39A-205ENST00000468676 ZBTB42B2RXF5 422 aa16.61■□□□□ 0.25
TMEM39A-205ENST00000468676 EML1O00423 815 aa16.61■□□□□ 0.25
TMEM39A-205ENST00000468676 LAD1O00515 517 aa16.61■□□□□ 0.25
TMEM39A-205ENST00000468676 OR52Z1P0C646 297 aa16.61■□□□□ 0.25
TMEM39A-205ENST00000468676 SPIRE1Q08AE8 756 aa16.61■□□□□ 0.25
TMEM39A-205ENST00000468676 UGCGQ16739 394 aa16.61■□□□□ 0.25
TMEM39A-205ENST00000468676 RASIP1Q5U651 963 aa16.61■□□□□ 0.25
TMEM39A-205ENST00000468676 IER5Q5VY09 327 aa16.61■□□□□ 0.25
TMEM39A-205ENST00000468676 TRAF7Q6Q0C0 670 aa16.61■□□□□ 0.25
TMEM39A-205ENST00000468676 RUFY4Q6ZNE9 571 aa16.61■□□□□ 0.25
TMEM39A-205ENST00000468676 ZNF710Q8N1W2 664 aa16.61■□□□□ 0.25
TMEM39A-205ENST00000468676 NEK9Q8TD19 979 aa16.61■□□□□ 0.25
TMEM39A-205ENST00000468676 TRAPPC12Q8WVT3 735 aa16.61■□□□□ 0.25
TMEM39A-205ENST00000468676 NIFKQ9BYG3 293 aaKnown RBP16.61■□□□□ 0.25
TMEM39A-205ENST00000468676 EVPLQ92817 2033 aa16.61■□□□□ 0.25
TMEM39A-205ENST00000468676 TET1Q8NFU7 2136 aa16.61■□□□□ 0.25
TMEM39A-205ENST00000468676 M0QZ92 97 aa16.6■□□□□ 0.25
TMEM39A-205ENST00000468676 BAIAP3O94812 1187 aa16.6■□□□□ 0.25
TMEM39A-205ENST00000468676 TMOD1P28289 359 aa16.6■□□□□ 0.25
TMEM39A-205ENST00000468676 TOB1P50616 345 aaPredicted RBP16.6■□□□□ 0.25
TMEM39A-205ENST00000468676 TMEM266Q2M3C6 531 aa16.6■□□□□ 0.25
TMEM39A-205ENST00000468676 CNKSR3Q6P9H4 555 aa16.6■□□□□ 0.25
TMEM39A-205ENST00000468676 OTOP2Q7RTS6 562 aa16.6■□□□□ 0.25
TMEM39A-205ENST00000468676 BRAPQ7Z569 592 aa16.6■□□□□ 0.25
TMEM39A-205ENST00000468676 BANK1Q8NDB2 785 aa16.6■□□□□ 0.25
TMEM39A-205ENST00000468676 DNAJB3Q8WWF6 145 aa16.6■□□□□ 0.25
TMEM39A-205ENST00000468676 VWCEQ96DN2 955 aa16.6■□□□□ 0.25
TMEM39A-205ENST00000468676 TMEM60Q9H2L4 133 aa16.6■□□□□ 0.25
TMEM39A-205ENST00000468676 ZSWIM4Q9H7M6 989 aa16.6■□□□□ 0.25
TMEM39A-205ENST00000468676 PPME1Q9Y570 386 aa16.6■□□□□ 0.25
TMEM39A-205ENST00000468676 LAMA3Q16787 3333 aa16.6■□□□□ 0.25
TMEM39A-205ENST00000468676 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.59■□□□□ 0.25
TMEM39A-205ENST00000468676 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.59■□□□□ 0.25
TMEM39A-205ENST00000468676 DDX11L8A8MPP1 907 aa16.59■□□□□ 0.25
TMEM39A-205ENST00000468676 NBNO60934 754 aa16.59■□□□□ 0.25
TMEM39A-205ENST00000468676 EFCAB14O75071 495 aa16.59■□□□□ 0.25
TMEM39A-205ENST00000468676 C22orf31O95567 290 aa16.59■□□□□ 0.25
TMEM39A-205ENST00000468676 HSP90AA1P07900 732 aaKnown RBP16.59■□□□□ 0.25
TMEM39A-205ENST00000468676 PDIA4P13667 645 aaKnown RBP16.59■□□□□ 0.25
TMEM39A-205ENST00000468676 FXR1P51114 621 aaKnown RBP eCLIP16.59■□□□□ 0.25
TMEM39A-205ENST00000468676 MRPS6P82932 125 aaKnown RBP16.59■□□□□ 0.25
TMEM39A-205ENST00000468676 SMAD3P84022 425 aaKnown RBP16.59■□□□□ 0.25
TMEM39A-205ENST00000468676 GPNMBQ14956 572 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms