RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 IMPACTQ9P2X3 320 aa21.02■□□□□ 0.96
SMC4-209ENST00000468653 GABBR1Q9UBS5 961 aa21.02■□□□□ 0.96
SMC4-209ENST00000468653 LIMA1Q9UHB6 759 aaKnown RBP21.02■□□□□ 0.96
SMC4-209ENST00000468653 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.02■□□□□ 0.96
SMC4-209ENST00000468653 IVNS1ABPQ9Y6Y0 642 aa21.02■□□□□ 0.96
SMC4-209ENST00000468653 A0A1B0GTH6 734 aa21.02■□□□□ 0.96
SMC4-209ENST00000468653 TGFB3P10600 412 aa21.02■□□□□ 0.96
SMC4-209ENST00000468653 LRRC63Q05C16 580 aa21.02■□□□□ 0.96
SMC4-209ENST00000468653 SWSAP1Q6NVH7 229 aa21.02■□□□□ 0.96
SMC4-209ENST00000468653 FGFBP2Q9BYJ0 223 aa21.02■□□□□ 0.96
SMC4-209ENST00000468653 ODF2LQ9ULJ1 636 aa21.02■□□□□ 0.96
SMC4-209ENST00000468653 ZKSCAN5Q9Y2L8 839 aa21.02■□□□□ 0.96
SMC4-209ENST00000468653 PASKQ96RG2 1323 aa21.01■□□□□ 0.95
SMC4-209ENST00000468653 LOC102724159A0A0B4J2E5 919 aa21.01■□□□□ 0.95
SMC4-209ENST00000468653 SFI1A8K8P3 1242 aa21.01■□□□□ 0.95
SMC4-209ENST00000468653 STRNO43815 780 aa21.01■□□□□ 0.95
SMC4-209ENST00000468653 UBA1P22314 1058 aaKnown RBP21.01■□□□□ 0.95
SMC4-209ENST00000468653 GUCY2CP25092 1073 aa21.01■□□□□ 0.95
SMC4-209ENST00000468653 RARRES1P49788 294 aa21.01■□□□□ 0.95
SMC4-209ENST00000468653 NEDD9Q14511 834 aa21.01■□□□□ 0.95
SMC4-209ENST00000468653 PWP2Q15269 919 aaKnown RBP21.01■□□□□ 0.95
SMC4-209ENST00000468653 KRT31Q15323 416 aa21.01■□□□□ 0.95
SMC4-209ENST00000468653 TRMT1LQ7Z2T5 733 aaKnown RBP21.01■□□□□ 0.95
SMC4-209ENST00000468653 FAM114A1Q8IWE2 563 aa21.01■□□□□ 0.95
SMC4-209ENST00000468653 MYCT1Q8N699 235 aa21.01■□□□□ 0.95
SMC4-209ENST00000468653 MRPL44Q9H9J2 332 aaKnown RBP21.01■□□□□ 0.95
SMC4-209ENST00000468653 PARVGQ9HBI0 331 aa21.01■□□□□ 0.95
SMC4-209ENST00000468653 ANKEF1Q9NU02 776 aa21.01■□□□□ 0.95
SMC4-209ENST00000468653 INTS13Q9NVM9 706 aa21.01■□□□□ 0.95
SMC4-209ENST00000468653 LOXHD1Q8IVV2 1947 aa21.01■□□□□ 0.95
SMC4-209ENST00000468653 ASB14A6NK59 587 aa21■□□□□ 0.95
SMC4-209ENST00000468653 BACH1O14867 736 aa21■□□□□ 0.95
SMC4-209ENST00000468653 FGFR1OPO95684 399 aaKnown RBP21■□□□□ 0.95
SMC4-209ENST00000468653 MSNP26038 577 aaKnown RBP21■□□□□ 0.95
SMC4-209ENST00000468653 EEF1GP26641 437 aaKnown RBP21■□□□□ 0.95
SMC4-209ENST00000468653 ADORA2AP29274 412 aa21■□□□□ 0.95
SMC4-209ENST00000468653 NR1I3Q14994 352 aa21■□□□□ 0.95
SMC4-209ENST00000468653 FAM110CQ1W6H9 321 aa21■□□□□ 0.95
SMC4-209ENST00000468653 UTP14CQ5TAP6 766 aaKnown RBP21■□□□□ 0.95
SMC4-209ENST00000468653 KCNV1Q6PIU1 500 aa21■□□□□ 0.95
SMC4-209ENST00000468653 ABHD15Q6UXT9 468 aa21■□□□□ 0.95
SMC4-209ENST00000468653 APTXQ7Z2E3 356 aaKnown RBP21■□□□□ 0.95
SMC4-209ENST00000468653 IRF2BP1Q8IU81 584 aa21■□□□□ 0.95
SMC4-209ENST00000468653 VSTM4Q8IW00 320 aa21■□□□□ 0.95
SMC4-209ENST00000468653 NELFCDQ8IXH7 590 aa21■□□□□ 0.95
SMC4-209ENST00000468653 ABRAQ8N0Z2 381 aa21■□□□□ 0.95
SMC4-209ENST00000468653 SCFD1Q8WVM8 642 aa21■□□□□ 0.95
SMC4-209ENST00000468653 SUPT20HL2P0C7V6 817 aa21■□□□□ 0.95
SMC4-209ENST00000468653 GSDMDP57764 484 aa21■□□□□ 0.95
SMC4-209ENST00000468653 XKR9Q5GH70 373 aa21■□□□□ 0.95
SMC4-209ENST00000468653 OTUD6AQ7L8S5 288 aa21■□□□□ 0.95
SMC4-209ENST00000468653 OLFML3Q9NRN5 406 aa21■□□□□ 0.95
SMC4-209ENST00000468653 TELO2Q9Y4R8 837 aa21■□□□□ 0.95
SMC4-209ENST00000468653 LRRC10BA6NIK2 292 aa20.99■□□□□ 0.95
SMC4-209ENST00000468653 COPB1P53618 953 aaKnown RBP20.99■□□□□ 0.95
SMC4-209ENST00000468653 FOXR2Q6PJQ5 311 aa20.99■□□□□ 0.95
SMC4-209ENST00000468653 MORC4Q8TE76 937 aa20.99■□□□□ 0.95
SMC4-209ENST00000468653 TAB2Q9NYJ8 693 aa20.99■□□□□ 0.95
SMC4-209ENST00000468653 SEL1LQ9UBV2 794 aa20.99■□□□□ 0.95
SMC4-209ENST00000468653 ZNFX1Q9P2E3 1918 aaKnown RBP20.99■□□□□ 0.95
SMC4-209ENST00000468653 TMEM150BA6NC51 233 aa20.98■□□□□ 0.95
SMC4-209ENST00000468653 IGF2BP3O00425 579 aaKnown RBP eCLIP20.98■□□□□ 0.95
SMC4-209ENST00000468653 N4BP3O15049 544 aa20.98■□□□□ 0.95
SMC4-209ENST00000468653 USO1O60763 962 aaKnown RBP20.98■□□□□ 0.95
SMC4-209ENST00000468653 HIP1RO75146 1068 aa20.98■□□□□ 0.95
SMC4-209ENST00000468653 GCNT3O95395 438 aa20.98■□□□□ 0.95
SMC4-209ENST00000468653 CASP5P51878 434 aa20.98■□□□□ 0.95
SMC4-209ENST00000468653 ZNF792Q3KQV3 632 aa20.98■□□□□ 0.95
SMC4-209ENST00000468653 CCDC60Q8IWA6 550 aaPredicted RBP20.98■□□□□ 0.95
SMC4-209ENST00000468653 EEF2KMTQ96G04 330 aa20.98■□□□□ 0.95
SMC4-209ENST00000468653 VPS16Q9H269 839 aa20.98■□□□□ 0.95
SMC4-209ENST00000468653 ZCCHC17Q9NP64 241 aaKnown RBP20.98■□□□□ 0.95
SMC4-209ENST00000468653 RTN4Q9NQC3 1192 aaKnown RBP20.98■□□□□ 0.95
SMC4-209ENST00000468653 DOCK5Q9H7D0 1870 aa20.98■□□□□ 0.95
SMC4-209ENST00000468653 ZNF862O60290 1169 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 FARP2O94887 1054 aaPredicted RBP20.97■□□□□ 0.95
SMC4-209ENST00000468653 GGPS1O95749 300 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 SLC10A3P09131 477 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 MYBP10242 640 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 MAPK4P31152 587 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 ZNF131P52739 623 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 TAF1CQ15572 869 aaPredicted RBP20.97■□□□□ 0.95
SMC4-209ENST00000468653 LY6KQ17RY6 165 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 PLA2G4FQ68DD2 849 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 MAEAQ7L5Y9 396 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 GPR142Q7Z601 462 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 FBXO16Q8IX29 292 aaPredicted RBP20.97■□□□□ 0.95
SMC4-209ENST00000468653 SH2D3AQ9BRG2 576 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 MLXIPQ9HAP2 919 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.97■□□□□ 0.95
SMC4-209ENST00000468653 TLL2Q9Y6L7 1015 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 ATG7O95352 703 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 TPM2P07951 284 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 NPEPPSP55786 919 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 PTPN21Q16825 1174 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 ODR4Q5SWX8 454 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 ANO5Q75V66 913 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 ARMCX2Q7L311 632 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 EPM2AIP1Q7L775 607 aaPredicted RBP20.97■□□□□ 0.95
SMC4-209ENST00000468653 PLEKHH3Q7Z736 793 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms