RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 MAFKO60675 156 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 TMEM253P0C7T8 217 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 FSTP19883 344 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 GP2P55259 537 aaKnown RBP4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 CHAF1AQ13111 956 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 NKPD1Q17RQ9 610 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 CCDC62Q6P9F0 684 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 SRLQ86TD4 932 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 NLRP10Q86W26 655 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 SIRT2Q8IXJ6 389 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 FAM186BQ8IYM0 893 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 LZTR1Q8N653 840 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 ZBTB34Q8NCN2 500 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 RUNDC1Q96C34 613 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 EAF2Q96CJ1 260 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 MYD88Q99836 296 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 OSBPL1AQ9BXW6 950 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 CDIP1Q9H305 208 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 C7orf69Q9H7B7 122 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 ZMAT4Q9H898 229 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 KCNH7Q9NS40 1196 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 ERVK13-1Q9NX77 482 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 ADGRE2Q9UHX3 823 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 PHTF1Q9UMS5 762 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 SRPK3Q9UPE1 567 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 DNM3Q9UQ16 869 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 RAXQ9Y2V3 346 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 WIZO95785 1651 aa4.64□□□□□ -1.67
HMGB1P25-201ENST00000468402 NACADO15069 1562 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 TMEM82A0PJX8 343 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 PRAMEF25A6NGN4 478 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 PQBP1O60828 265 aaKnown RBP4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 NDUFS2O75306 463 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 ZRANB2O95218 330 aaKnown RBP eCLIP4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 AGXTP21549 392 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 ENPP1P22413 925 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 TRAPPC10P48553 1259 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 AK2P54819 239 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 OXCT1P55809 520 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 STK3Q13188 491 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 RAPGEF1Q13905 1077 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 KIAA0753Q2KHM9 967 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 FIGNQ5HY92 759 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 BTBD8Q5XKL5 378 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 FSTL4Q6MZW2 842 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 TIGD7Q6NT04 549 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 CC2D1AQ6P1N0 951 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 PRR23CQ6ZRP0 262 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 ESPNLQ6ZVH7 1005 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 TMPRSS7Q7RTY8 843 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 THAP5Q7Z6K1 395 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 NOSTRINQ8IVI9 506 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 RBM12BQ8IXT5 1001 aaKnown RBP4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 SHISA5Q8N114 240 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 C7orf31Q8N865 590 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 TMEM52Q8NDY8 209 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 GATA6Q92908 595 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 FERMT2Q96AC1 680 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 ZNF496Q96IT1 587 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 FCRL2Q96LA5 508 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 TAAR9Q96RI9 348 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 ACO2Q99798 780 aaKnown RBP4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 ATP13A1Q9HD20 1204 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 SLC6A20Q9NP91 592 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 NLRC4Q9NPP4 1024 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 PLCB1Q9NQ66 1216 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 PNMA2Q9UL42 364 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 DMTF1Q9Y222 760 aa4.63□□□□□ -1.67
HMGB1P25-201ENST00000468402 SLC27A2O14975 620 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 FOXP2O15409 715 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 CLASP2O75122 1294 aaKnown RBP4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 PPFIA4O75335 1185 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 TCEA3O75764 348 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 CEACAM5P06731 702 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 LPLP06858 475 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 POU2F2P09086 479 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 MTHFD2P13995 350 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 RHCEP18577 417 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 C5AR1P21730 350 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 TACR1P25103 407 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 SERPINB3P29508 390 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 CLCN7P51798 805 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 ADKP55263 362 aaKnown RBP4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 RHDQ02161 417 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 TEKQ02763 1124 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 SLC14A2Q15849 920 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 FSCN1Q16658 493 aaKnown RBP4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 LONRF1Q17RB8 773 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 GAB4Q2WGN9 574 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 CCDC157Q569K6 752 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 ZFYVE27Q5T4F4 411 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 MROH9Q5TGP6 573 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 STEAP3Q658P3 488 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 ESRP1Q6NXG1 681 aaKnown RBP4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 LILRA6Q6PI73 481 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 B3GNT9Q6UX72 402 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 SRGAP1Q7Z6B7 1085 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 NME9Q86XW9 330 aa4.62□□□□□ -1.67
HMGB1P25-201ENST00000468402 SPACA3Q8IXA5 215 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms