RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 PADI3Q9ULW8 664 aa14.99□□□□□ -0.01
PTPN7-207ENST00000468385 IGSF9BQ9UPX0 1349 aa14.98□□□□□ -0.01
PTPN7-207ENST00000468385 PIEZO1Q92508 2521 aa14.98□□□□□ -0.01
PTPN7-207ENST00000468385 CCDC69A6NI79 296 aa14.98□□□□□ -0.01
PTPN7-207ENST00000468385 GATMP50440 423 aa14.98□□□□□ -0.01
PTPN7-207ENST00000468385 PLCB4Q15147 1175 aa14.98□□□□□ -0.01
PTPN7-207ENST00000468385 PAN2Q504Q3 1202 aaKnown RBP14.98□□□□□ -0.01
PTPN7-207ENST00000468385 NFXL1Q6ZNB6 911 aa14.98□□□□□ -0.01
PTPN7-207ENST00000468385 EFHBQ8N7U6 833 aa14.98□□□□□ -0.01
PTPN7-207ENST00000468385 TRAPPC12Q8WVT3 735 aa14.98□□□□□ -0.01
PTPN7-207ENST00000468385 POF1BQ8WVV4 589 aa14.98□□□□□ -0.01
PTPN7-207ENST00000468385 TMX1Q9H3N1 280 aa14.98□□□□□ -0.01
PTPN7-207ENST00000468385 SLC9A2Q9UBY0 812 aa14.98□□□□□ -0.01
PTPN7-207ENST00000468385 TRPC6Q9Y210 931 aa14.98□□□□□ -0.01
PTPN7-207ENST00000468385 PCDHA2Q9Y5H9 948 aa14.98□□□□□ -0.01
PTPN7-207ENST00000468385 M0QZ92 97 aa14.97□□□□□ -0.01
PTPN7-207ENST00000468385 STAG3L1P0CL83 205 aa14.97□□□□□ -0.01
PTPN7-207ENST00000468385 SCG2P13521 617 aa14.97□□□□□ -0.01
PTPN7-207ENST00000468385 MCM5P33992 734 aa14.97□□□□□ -0.01
PTPN7-207ENST00000468385 LIFRP42702 1097 aa14.97□□□□□ -0.01
PTPN7-207ENST00000468385 PAK2Q13177 524 aa14.97□□□□□ -0.01
PTPN7-207ENST00000468385 PLPPR4Q7Z2D5 763 aa14.97□□□□□ -0.01
PTPN7-207ENST00000468385 RAB11FIP4Q86YS3 637 aa14.97□□□□□ -0.01
PTPN7-207ENST00000468385 TMTC2Q8N394 836 aa14.97□□□□□ -0.01
PTPN7-207ENST00000468385 CCDC82Q8N4S0 544 aa14.97□□□□□ -0.01
PTPN7-207ENST00000468385 SMRP1Q8NCR6 262 aa14.97□□□□□ -0.01
PTPN7-207ENST00000468385 CYP2W1Q8TAV3 490 aa14.97□□□□□ -0.01
PTPN7-207ENST00000468385 EDAQ92838 391 aa14.97□□□□□ -0.01
PTPN7-207ENST00000468385 PPP2R3CQ969Q6 453 aa14.97□□□□□ -0.01
PTPN7-207ENST00000468385 TMEM87BQ96K49 555 aa14.97□□□□□ -0.01
PTPN7-207ENST00000468385 MFSD14AQ96MC6 490 aa14.97□□□□□ -0.01
PTPN7-207ENST00000468385 MXRA8Q9BRK3 442 aa14.97□□□□□ -0.01
PTPN7-207ENST00000468385 CELF4Q9BZC1 486 aaKnown RBP14.97□□□□□ -0.01
PTPN7-207ENST00000468385 AZI2Q9H6S1 392 aa14.97□□□□□ -0.01
PTPN7-207ENST00000468385 KCNH7Q9NS40 1196 aa14.97□□□□□ -0.01
PTPN7-207ENST00000468385 ZNF318Q5VUA4 2279 aa14.96□□□□□ -0.01
PTPN7-207ENST00000468385 NFASCO94856 1347 aa14.96□□□□□ -0.01
PTPN7-207ENST00000468385 KDM3AQ9Y4C1 1321 aa14.96□□□□□ -0.01
PTPN7-207ENST00000468385 SMIM35A0A1B0GVV1 85 aa14.96□□□□□ -0.01
PTPN7-207ENST00000468385 GLP2RO95838 553 aa14.96□□□□□ -0.01
PTPN7-207ENST00000468385 CALM1P0DP23 149 aa14.96□□□□□ -0.01
PTPN7-207ENST00000468385 CALM2P0DP24 149 aa14.96□□□□□ -0.01
PTPN7-207ENST00000468385 CALM3P0DP25 149 aa14.96□□□□□ -0.01
PTPN7-207ENST00000468385 NRIP1P48552 1158 aa14.96□□□□□ -0.01
PTPN7-207ENST00000468385 ACTR2P61160 394 aa14.96□□□□□ -0.01
PTPN7-207ENST00000468385 COASYQ13057 564 aa14.96□□□□□ -0.01
PTPN7-207ENST00000468385 TMTC3Q6ZXV5 915 aa14.96□□□□□ -0.01
PTPN7-207ENST00000468385 TNPO1Q92973 898 aaKnown RBP14.96□□□□□ -0.01
PTPN7-207ENST00000468385 PCDHGC5Q9Y5F6 944 aa14.96□□□□□ -0.01
PTPN7-207ENST00000468385 TECTAO75443 2155 aa14.95□□□□□ -0.02
PTPN7-207ENST00000468385 TRIOO75962 3097 aa14.95□□□□□ -0.02
PTPN7-207ENST00000468385 LOC730098B7Z3J9 87 aa14.95□□□□□ -0.02
PTPN7-207ENST00000468385 ATG7O95352 703 aa14.95□□□□□ -0.02
PTPN7-207ENST00000468385 ARP10275 920 aa14.95□□□□□ -0.02
PTPN7-207ENST00000468385 STAT5BP51692 787 aa14.95□□□□□ -0.02
PTPN7-207ENST00000468385 ITGB3BPQ13352 177 aaPredicted RBP14.95□□□□□ -0.02
PTPN7-207ENST00000468385 TMEM266Q2M3C6 531 aa14.95□□□□□ -0.02
PTPN7-207ENST00000468385 TYW1BQ6NUM6 668 aa14.95□□□□□ -0.02
PTPN7-207ENST00000468385 MTHFD1LQ6UB35 978 aa14.95□□□□□ -0.02
PTPN7-207ENST00000468385 HEATR3Q7Z4Q2 680 aa14.95□□□□□ -0.02
PTPN7-207ENST00000468385 BMP8AQ7Z5Y6 402 aa14.95□□□□□ -0.02
PTPN7-207ENST00000468385 RBM23Q86U06 439 aaKnown RBP14.95□□□□□ -0.02
PTPN7-207ENST00000468385 NME8Q8N427 588 aa14.95□□□□□ -0.02
PTPN7-207ENST00000468385 FANCBQ8NB91 859 aa14.95□□□□□ -0.02
PTPN7-207ENST00000468385 BARX2Q9UMQ3 279 aaPredicted RBP14.95□□□□□ -0.02
PTPN7-207ENST00000468385 LOXHD1Q8IVV2 1947 aa14.94□□□□□ -0.02
PTPN7-207ENST00000468385 IGKV6D-21A0A0A0MT36 114 aa14.94□□□□□ -0.02
PTPN7-207ENST00000468385 MGEA5O60502 916 aa14.94□□□□□ -0.02
PTPN7-207ENST00000468385 SARSP49591 514 aaKnown RBP14.94□□□□□ -0.02
PTPN7-207ENST00000468385 KRT76Q01546 638 aa14.94□□□□□ -0.02
PTPN7-207ENST00000468385 CBX2Q14781 532 aaPredicted RBP14.94□□□□□ -0.02
PTPN7-207ENST00000468385 WWC2Q6AWC2 1192 aa14.94□□□□□ -0.02
PTPN7-207ENST00000468385 PGBD1Q96JS3 809 aa14.94□□□□□ -0.02
PTPN7-207ENST00000468385 SDF4Q9BRK5 362 aa14.94□□□□□ -0.02
PTPN7-207ENST00000468385 LRRC2Q9BYS8 371 aa14.94□□□□□ -0.02
PTPN7-207ENST00000468385 LSG1Q9H089 658 aaKnown RBP14.94□□□□□ -0.02
PTPN7-207ENST00000468385 AGO4Q9HCK5 861 aaKnown RBP14.94□□□□□ -0.02
PTPN7-207ENST00000468385 ERVK-5Q9HDB9 667 aa14.94□□□□□ -0.02
PTPN7-207ENST00000468385 LRFN2Q9ULH4 789 aa14.94□□□□□ -0.02
PTPN7-207ENST00000468385 USP15Q9Y4E8 981 aaPredicted RBP14.94□□□□□ -0.02
PTPN7-207ENST00000468385 SLC12A7Q9Y666 1083 aa14.94□□□□□ -0.02
PTPN7-207ENST00000468385 PLXNA4Q9HCM2 1894 aa14.94□□□□□ -0.02
PTPN7-207ENST00000468385 CNTNAP5Q8WYK1 1306 aa14.93□□□□□ -0.02
PTPN7-207ENST00000468385 TMEM221A6NGB7 291 aa14.93□□□□□ -0.02
PTPN7-207ENST00000468385 M0R296 226 aa14.93□□□□□ -0.02
PTPN7-207ENST00000468385 SLC27A2O14975 620 aa14.93□□□□□ -0.02
PTPN7-207ENST00000468385 PPFIA3O75145 1194 aa14.93□□□□□ -0.02
PTPN7-207ENST00000468385 IBSPP21815 317 aaPredicted RBP14.93□□□□□ -0.02
PTPN7-207ENST00000468385 NFX1Q12986 1120 aaKnown RBP14.93□□□□□ -0.02
PTPN7-207ENST00000468385 CEP55Q53EZ4 464 aa14.93□□□□□ -0.02
PTPN7-207ENST00000468385 TRIM67Q6ZTA4 783 aa14.93□□□□□ -0.02
PTPN7-207ENST00000468385 MICU3Q86XE3 530 aa14.93□□□□□ -0.02
PTPN7-207ENST00000468385 PRSS33Q8NF86 280 aa14.93□□□□□ -0.02
PTPN7-207ENST00000468385 TMEM40Q8WWA1 233 aa14.93□□□□□ -0.02
PTPN7-207ENST00000468385 CDHR5Q9HBB8 845 aa14.93□□□□□ -0.02
PTPN7-207ENST00000468385 RIC8AQ9NPQ8 531 aa14.93□□□□□ -0.02
PTPN7-207ENST00000468385 NOC2LQ9Y3T9 749 aaKnown RBP14.93□□□□□ -0.02
PTPN7-207ENST00000468385 PCDHB7Q9Y5E2 793 aa14.93□□□□□ -0.02
PTPN7-207ENST00000468385 PER2O15055 1255 aa14.92□□□□□ -0.02
PTPN7-207ENST00000468385 RPS6KA5O75582 802 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms