RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 CKAP2LQ8IYA6 745 aa22.53■■□□□ 1.2
NPHP4-206ENST00000468253 CEP131Q9UPN4 1083 aa22.53■■□□□ 1.2
NPHP4-206ENST00000468253 IGSF9BQ9UPX0 1349 aa22.53■■□□□ 1.2
NPHP4-206ENST00000468253 EML1O00423 815 aa22.52■■□□□ 1.2
NPHP4-206ENST00000468253 ZNF862O60290 1169 aa22.52■■□□□ 1.2
NPHP4-206ENST00000468253 P4HBP07237 508 aaKnown RBP22.52■■□□□ 1.2
NPHP4-206ENST00000468253 PSMC5P62195 406 aa22.52■■□□□ 1.2
NPHP4-206ENST00000468253 SPIRE1Q08AE8 756 aa22.52■■□□□ 1.2
NPHP4-206ENST00000468253 TMEM240Q5SV17 173 aa22.52■■□□□ 1.2
NPHP4-206ENST00000468253 PSRC1Q6PGN9 363 aaPredicted RBP22.52■■□□□ 1.2
NPHP4-206ENST00000468253 LRRC8DQ7L1W4 858 aa22.52■■□□□ 1.2
NPHP4-206ENST00000468253 RSPH3Q86UC2 560 aa22.52■■□□□ 1.2
NPHP4-206ENST00000468253 NME8Q8N427 588 aa22.52■■□□□ 1.2
NPHP4-206ENST00000468253 C4orf32Q8N8J7 132 aa22.52■■□□□ 1.2
NPHP4-206ENST00000468253 TMEM60Q9H2L4 133 aa22.52■■□□□ 1.2
NPHP4-206ENST00000468253 TTC12Q9H892 705 aaPredicted RBP22.52■■□□□ 1.2
NPHP4-206ENST00000468253 TUBE1Q9UJT0 475 aa22.52■■□□□ 1.2
NPHP4-206ENST00000468253 TRIOBPQ9H2D6 2365 aa22.52■■□□□ 1.19
NPHP4-206ENST00000468253 THPOP40225 353 aa22.51■■□□□ 1.19
NPHP4-206ENST00000468253 QARSP47897 775 aaKnown RBP22.51■■□□□ 1.19
NPHP4-206ENST00000468253 SHHQ15465 462 aa22.51■■□□□ 1.19
NPHP4-206ENST00000468253 LRIT3Q3SXY7 679 aa22.51■■□□□ 1.19
NPHP4-206ENST00000468253 XKR3Q5GH77 459 aa22.51■■□□□ 1.19
NPHP4-206ENST00000468253 FAM26DQ5JW98 314 aa22.51■■□□□ 1.19
NPHP4-206ENST00000468253 TRAF7Q6Q0C0 670 aa22.51■■□□□ 1.19
NPHP4-206ENST00000468253 WNT8BQ93098 351 aa22.51■■□□□ 1.19
NPHP4-206ENST00000468253 VWCEQ96DN2 955 aa22.51■■□□□ 1.19
NPHP4-206ENST00000468253 SCLYQ96I15 445 aa22.51■■□□□ 1.19
NPHP4-206ENST00000468253 NIFKQ9BYG3 293 aaKnown RBP22.51■■□□□ 1.19
NPHP4-206ENST00000468253 PCDH10Q9P2E7 1040 aa22.51■■□□□ 1.19
NPHP4-206ENST00000468253 DOCK5Q9H7D0 1870 aa22.5■■□□□ 1.19
NPHP4-206ENST00000468253 SMIM35A0A1B0GVV1 85 aa22.5■■□□□ 1.19
NPHP4-206ENST00000468253 RSPH10B2B2RC85 870 aa22.5■■□□□ 1.19
NPHP4-206ENST00000468253 ZBTB42B2RXF5 422 aa22.5■■□□□ 1.19
NPHP4-206ENST00000468253 LAD1O00515 517 aa22.5■■□□□ 1.19
NPHP4-206ENST00000468253 MAGEB2O15479 319 aa22.5■■□□□ 1.19
NPHP4-206ENST00000468253 FGBP02675 491 aa22.5■■□□□ 1.19
NPHP4-206ENST00000468253 CXCL10P02778 98 aa22.5■■□□□ 1.19
NPHP4-206ENST00000468253 OATP04181 439 aa22.5■■□□□ 1.19
NPHP4-206ENST00000468253 RSPH10BP0C881 870 aa22.5■■□□□ 1.19
NPHP4-206ENST00000468253 SYT1P21579 422 aa22.5■■□□□ 1.19
NPHP4-206ENST00000468253 KLRC1P26715 233 aa22.5■■□□□ 1.19
NPHP4-206ENST00000468253 TXKP42681 527 aa22.5■■□□□ 1.19
NPHP4-206ENST00000468253 ZNF618Q5T7W0 954 aa22.5■■□□□ 1.19
NPHP4-206ENST00000468253 MTHFD1LQ6UB35 978 aa22.5■■□□□ 1.19
NPHP4-206ENST00000468253 BRAPQ7Z569 592 aa22.5■■□□□ 1.19
NPHP4-206ENST00000468253 HSD17B14Q9BPX1 270 aa22.5■■□□□ 1.19
NPHP4-206ENST00000468253 STBD1O95210 358 aa22.49■■□□□ 1.19
NPHP4-206ENST00000468253 IGBP1P78318 339 aa22.49■■□□□ 1.19
NPHP4-206ENST00000468253 PDIA5Q14554 519 aa22.49■■□□□ 1.19
NPHP4-206ENST00000468253 GPNMBQ14956 572 aa22.49■■□□□ 1.19
NPHP4-206ENST00000468253 ZNF365Q70YC5 407 aa22.49■■□□□ 1.19
NPHP4-206ENST00000468253 HERVK_113Q902F9 699 aa22.49■■□□□ 1.19
NPHP4-206ENST00000468253 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.49■■□□□ 1.194e-7■■■■□ 21.2
NPHP4-206ENST00000468253 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.49■■□□□ 1.19
NPHP4-206ENST00000468253 SLITRK3O94933 977 aa22.48■■□□□ 1.19
NPHP4-206ENST00000468253 OR52Z1P0C646 297 aa22.48■■□□□ 1.19
NPHP4-206ENST00000468253 PRKCEQ02156 737 aa22.48■■□□□ 1.19
NPHP4-206ENST00000468253 TARBP2Q15633 366 aaKnown RBP22.48■■□□□ 1.19
NPHP4-206ENST00000468253 UGCGQ16739 394 aa22.48■■□□□ 1.19
NPHP4-206ENST00000468253 C9orf50Q5SZB4 431 aa22.48■■□□□ 1.19
NPHP4-206ENST00000468253 RASIP1Q5U651 963 aa22.48■■□□□ 1.19
NPHP4-206ENST00000468253 RUFY4Q6ZNE9 571 aa22.48■■□□□ 1.19
NPHP4-206ENST00000468253 C4orf19Q8IY42 314 aa22.48■■□□□ 1.19
NPHP4-206ENST00000468253 ZNF710Q8N1W2 664 aa22.48■■□□□ 1.19
NPHP4-206ENST00000468253 NEK9Q8TD19 979 aa22.48■■□□□ 1.19
NPHP4-206ENST00000468253 ZSWIM4Q9H7M6 989 aa22.48■■□□□ 1.19
NPHP4-206ENST00000468253 PPME1Q9Y570 386 aa22.48■■□□□ 1.19
NPHP4-206ENST00000468253 PCDHB6Q9Y5E3 794 aa22.48■■□□□ 1.19
NPHP4-206ENST00000468253 LYPLA2O95372 231 aa22.47■■□□□ 1.19
NPHP4-206ENST00000468253 ACRP10323 421 aa22.47■■□□□ 1.19
NPHP4-206ENST00000468253 PTGDRQ13258 359 aa22.47■■□□□ 1.19
NPHP4-206ENST00000468253 IER5Q5VY09 327 aa22.47■■□□□ 1.19
NPHP4-206ENST00000468253 NCAPH2Q6IBW4 605 aa22.47■■□□□ 1.19
NPHP4-206ENST00000468253 FAM43BQ6ZT52 329 aaPredicted RBP22.47■■□□□ 1.19
NPHP4-206ENST00000468253 MTIF3Q9H2K0 278 aaKnown RBP22.47■■□□□ 1.19
NPHP4-206ENST00000468253 DDX11L8A8MPP1 907 aa22.46■■□□□ 1.19
NPHP4-206ENST00000468253 NBNO60934 754 aa22.46■■□□□ 1.19
NPHP4-206ENST00000468253 ACTN1P12814 892 aa22.46■■□□□ 1.19
NPHP4-206ENST00000468253 XRCC6P12956 609 aaKnown RBP eCLIP22.46■■□□□ 1.19
NPHP4-206ENST00000468253 PRPHP41219 470 aa22.46■■□□□ 1.19
NPHP4-206ENST00000468253 FXR2P51116 673 aaKnown RBP eCLIP22.46■■□□□ 1.19
NPHP4-206ENST00000468253 KIAA0319LQ8IZA0 1049 aa22.46■■□□□ 1.19
NPHP4-206ENST00000468253 TRAPPC12Q8WVT3 735 aa22.46■■□□□ 1.19
NPHP4-206ENST00000468253 DNAJB3Q8WWF6 145 aa22.46■■□□□ 1.19
NPHP4-206ENST00000468253 EIF2AK1Q9BQI3 630 aaKnown RBP22.46■■□□□ 1.19
NPHP4-206ENST00000468253 STK24Q9Y6E0 443 aa22.46■■□□□ 1.19
NPHP4-206ENST00000468253 SQORQ9Y6N5 450 aa22.46■■□□□ 1.19
NPHP4-206ENST00000468253 C22orf31O95567 290 aa22.45■■□□□ 1.18
NPHP4-206ENST00000468253 TECP42680 631 aa22.45■■□□□ 1.18
NPHP4-206ENST00000468253 OTUD6AQ7L8S5 288 aa22.45■■□□□ 1.18
NPHP4-206ENST00000468253 DEFB128Q7Z7B8 93 aa22.45■■□□□ 1.18
NPHP4-206ENST00000468253 EXOC8Q8IYI6 725 aa22.45■■□□□ 1.18
NPHP4-206ENST00000468253 BANK1Q8NDB2 785 aa22.45■■□□□ 1.18
NPHP4-206ENST00000468253 FTOQ9C0B1 505 aaKnown RBP eCLIP22.45■■□□□ 1.18
NPHP4-206ENST00000468253 RGL1Q9NZL6 768 aa22.45■■□□□ 1.18
NPHP4-206ENST00000468253 VPS37CA5D8V6 355 aaPredicted RBP22.44■■□□□ 1.18
NPHP4-206ENST00000468253 CHRNA1P02708 482 aa22.44■■□□□ 1.18
NPHP4-206ENST00000468253 HSP90AA1P07900 732 aaKnown RBP22.44■■□□□ 1.18
NPHP4-206ENST00000468253 TMOD1P28289 359 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms