RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 MAPKAPK2P49137 400 aa5.55□□□□□ -1.52
SSR3-204ENST00000467733 FXR1P51114 621 aaKnown RBP eCLIP5.55□□□□□ -1.52
SSR3-204ENST00000467733 SNW1Q13573 536 aaKnown RBP5.55□□□□□ -1.52
SSR3-204ENST00000467733 RTP5Q14D33 572 aa5.55□□□□□ -1.52
SSR3-204ENST00000467733 TARBP2Q15633 366 aaKnown RBP5.55□□□□□ -1.52
SSR3-204ENST00000467733 PKN2Q16513 984 aaKnown RBP5.55□□□□□ -1.52
SSR3-204ENST00000467733 CWF19L2Q2TBE0 894 aaKnown RBP5.55□□□□□ -1.52
SSR3-204ENST00000467733 PLEKHN1Q494U1 663 aaPredicted RBP5.55□□□□□ -1.52
SSR3-204ENST00000467733 CRY2Q49AN0 593 aa5.55□□□□□ -1.52
SSR3-204ENST00000467733 CLEC4GQ6UXB4 293 aa5.55□□□□□ -1.52
SSR3-204ENST00000467733 RPTNQ6XPR3 784 aa5.55□□□□□ -1.52
SSR3-204ENST00000467733 NPM2Q86SE8 214 aaKnown RBP5.55□□□□□ -1.52
SSR3-204ENST00000467733 NIM1KQ8IY84 436 aa5.55□□□□□ -1.52
SSR3-204ENST00000467733 GOLM1Q8NBJ4 401 aa5.55□□□□□ -1.52
SSR3-204ENST00000467733 ZNF496Q96IT1 587 aaPredicted RBP5.55□□□□□ -1.52
SSR3-204ENST00000467733 CDADC1Q9BWV3 514 aa5.55□□□□□ -1.52
SSR3-204ENST00000467733 ZNF408Q9H9D4 720 aa5.55□□□□□ -1.52
SSR3-204ENST00000467733 CHST7Q9NS84 486 aa5.55□□□□□ -1.52
SSR3-204ENST00000467733 RNF186Q9NXI6 227 aa5.55□□□□□ -1.52
SSR3-204ENST00000467733 ZNF652Q9Y2D9 606 aa5.55□□□□□ -1.52
SSR3-204ENST00000467733 LRRC37AA6NMS7 1700 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 KIF7Q2M1P5 1343 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 IRS2Q9Y4H2 1338 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 MINDY4BA8MYZ0 360 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 F6X3S4 739 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 K7ESM1 405 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 FFAR3O14843 346 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 CLEC3AO75596 197 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 ZNF205O95201 554 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 A1BGP04217 495 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 IGFBP6P24592 240 aaPredicted RBP5.54□□□□□ -1.52
SSR3-204ENST00000467733 BMP8BP34820 402 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 IL13P35225 146 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 CCNFP41002 786 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 GMPSP49915 693 aaPredicted RBP5.54□□□□□ -1.52
SSR3-204ENST00000467733 SLURP1P55000 103 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 FAM160A1Q05DH4 1040 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 RGMBQ6NW40 437 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 ZNF790Q6PG37 636 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 ERMP1Q7Z2K6 904 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 GPR20Q99678 358 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 BACH2Q9BYV9 841 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 PRDM14Q9GZV8 571 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 METTL5Q9NRN9 209 aaKnown RBP5.54□□□□□ -1.52
SSR3-204ENST00000467733 USP40Q9NVE5 1235 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 KBTBD4Q9NVX7 518 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 LAMB1P07942 1786 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 ANKRD36CQ5JPF3 1778 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 IBTKQ9P2D0 1353 aaPredicted RBP5.54□□□□□ -1.52
SSR3-204ENST00000467733 TAF1P21675 1872 aa5.54□□□□□ -1.52
SSR3-204ENST00000467733 PSME4Q14997 1843 aa5.53□□□□□ -1.52
SSR3-204ENST00000467733 PPIP5K2O43314 1243 aa5.53□□□□□ -1.52
SSR3-204ENST00000467733 INSRRP14616 1297 aa5.53□□□□□ -1.52
SSR3-204ENST00000467733 NCKAP1LP55160 1127 aa5.53□□□□□ -1.52
SSR3-204ENST00000467733 KIF23Q02241 960 aaPredicted RBP5.53□□□□□ -1.52
SSR3-204ENST00000467733 KIR3DS1Q14943 382 aa5.53□□□□□ -1.52
SSR3-204ENST00000467733 UBXN11Q5T124 520 aa5.53□□□□□ -1.52
SSR3-204ENST00000467733 CDCP2Q5VXM1 449 aa5.53□□□□□ -1.52
SSR3-204ENST00000467733 HHIPL2Q6UWX4 724 aa5.53□□□□□ -1.52
SSR3-204ENST00000467733 LRRC3Q9BY71 257 aa5.53□□□□□ -1.52
SSR3-204ENST00000467733 VPS33BQ9H267 617 aa5.53□□□□□ -1.52
SSR3-204ENST00000467733 GBA2Q9HCG7 927 aaPredicted RBP5.53□□□□□ -1.52
SSR3-204ENST00000467733 PODXL2Q9NZ53 605 aa5.53□□□□□ -1.52
SSR3-204ENST00000467733 PRR13Q9NZ81 148 aa5.53□□□□□ -1.52
SSR3-204ENST00000467733 IMPACTQ9P2X3 320 aa5.53□□□□□ -1.52
SSR3-204ENST00000467733 NIP7Q9Y221 180 aaKnown RBP eCLIP5.53□□□□□ -1.52
SSR3-204ENST00000467733 SUPT16HQ9Y5B9 1047 aaKnown RBP5.53□□□□□ -1.52
SSR3-204ENST00000467733 UNC80Q8N2C7 3258 aa5.53□□□□□ -1.52
SSR3-204ENST00000467733 LAMA3Q16787 3333 aa5.53□□□□□ -1.52
SSR3-204ENST00000467733 KDM3BQ7LBC6 1761 aa5.52□□□□□ -1.53
SSR3-204ENST00000467733 DUOX1Q9NRD9 1551 aa5.52□□□□□ -1.53
SSR3-204ENST00000467733 SCAMP3O14828 347 aaKnown RBP5.52□□□□□ -1.53
SSR3-204ENST00000467733 PRICKLE3O43900 615 aaPredicted RBP5.52□□□□□ -1.53
SSR3-204ENST00000467733 MSL3P1P0C860 447 aa5.52□□□□□ -1.53
SSR3-204ENST00000467733 EIF4A3P38919 411 aaKnown RBP5.52□□□□□ -1.53
SSR3-204ENST00000467733 LIMS1P48059 325 aa5.52□□□□□ -1.53
SSR3-204ENST00000467733 ZNF200P98182 395 aaPredicted RBP5.52□□□□□ -1.53
SSR3-204ENST00000467733 CXCL9Q07325 125 aa5.52□□□□□ -1.53
SSR3-204ENST00000467733 TEFQ10587 303 aa5.52□□□□□ -1.53
SSR3-204ENST00000467733 PUM1Q14671 1186 aaKnown RBP eCLIP5.52□□□□□ -1.538e-9■□□□□ 10.1
SSR3-204ENST00000467733 MTHFSDQ2M296 383 aaKnown RBP5.52□□□□□ -1.53
SSR3-204ENST00000467733 OVOS1Q6IE37 1185 aa5.52□□□□□ -1.53
SSR3-204ENST00000467733 C2orf69Q8N8R5 385 aa5.52□□□□□ -1.53
SSR3-204ENST00000467733 RPGRQ92834 1020 aaKnown RBP5.52□□□□□ -1.53
SSR3-204ENST00000467733 RNF34Q969K3 372 aa5.52□□□□□ -1.53
SSR3-204ENST00000467733 MRRFQ96E11 262 aaKnown RBP5.52□□□□□ -1.53
SSR3-204ENST00000467733 COPRSQ9NQ92 184 aa5.52□□□□□ -1.53
SSR3-204ENST00000467733 ZNRF3Q9ULT6 936 aa5.52□□□□□ -1.53
SSR3-204ENST00000467733 PCDHB12Q9Y5F1 795 aa5.52□□□□□ -1.53
SSR3-204ENST00000467733 CEMIPQ8WUJ3 1361 aa5.52□□□□□ -1.53
SSR3-204ENST00000467733 SCN9AQ15858 1988 aa5.51□□□□□ -1.53
SSR3-204ENST00000467733 A0A1W2PQ27 194 aa5.51□□□□□ -1.53
SSR3-204ENST00000467733 A0A1W2PQ64 194 aa5.51□□□□□ -1.53
SSR3-204ENST00000467733 A0A1W2PQC6 194 aa5.51□□□□□ -1.53
SSR3-204ENST00000467733 A0A1W2PQD8 194 aa5.51□□□□□ -1.53
SSR3-204ENST00000467733 SRGAP3O43295 1099 aa5.51□□□□□ -1.53
SSR3-204ENST00000467733 ATE1O95260 518 aa5.51□□□□□ -1.53
SSR3-204ENST00000467733 HMOX1P09601 288 aa5.51□□□□□ -1.53
SSR3-204ENST00000467733 PIP4K2AP48426 406 aaPredicted RBP5.51□□□□□ -1.53
SSR3-204ENST00000467733 VWA3BQ502W6 1294 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms