RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 ZSWIM6Q9HCJ5 1215 aa16.81■□□□□ 0.28
ATPAF2-204ENST00000467560 LMCD1Q9NZU5 365 aa16.81■□□□□ 0.28
ATPAF2-204ENST00000467560 VPS54Q9P1Q0 977 aa16.81■□□□□ 0.28
ATPAF2-204ENST00000467560 PCDHA2Q9Y5H9 948 aa16.81■□□□□ 0.28
ATPAF2-204ENST00000467560 POTEB3A0JP26 581 aa16.8■□□□□ 0.28
ATPAF2-204ENST00000467560 ZBTB42B2RXF5 422 aa16.8■□□□□ 0.28
ATPAF2-204ENST00000467560 IPO5O00410 1097 aaKnown RBP16.8■□□□□ 0.28
ATPAF2-204ENST00000467560 REC8O95072 547 aa16.8■□□□□ 0.28
ATPAF2-204ENST00000467560 POTEBQ6S5H4 581 aa16.8■□□□□ 0.28
ATPAF2-204ENST00000467560 MTHFD1LQ6UB35 978 aa16.8■□□□□ 0.28
ATPAF2-204ENST00000467560 RUFY3Q7L099 469 aa16.8■□□□□ 0.28
ATPAF2-204ENST00000467560 RSPH3Q86UC2 560 aa16.8■□□□□ 0.28
ATPAF2-204ENST00000467560 LENG9Q96B70 501 aa16.8■□□□□ 0.28
ATPAF2-204ENST00000467560 C6orf50Q9HD87 102 aa16.8■□□□□ 0.28
ATPAF2-204ENST00000467560 COL4A6Q14031 1691 aa16.8■□□□□ 0.28
ATPAF2-204ENST00000467560 IFNAR1P17181 557 aa16.79■□□□□ 0.28
ATPAF2-204ENST00000467560 PSMA5P28066 241 aa16.79■□□□□ 0.28
ATPAF2-204ENST00000467560 SWSAP1Q6NVH7 229 aa16.79■□□□□ 0.28
ATPAF2-204ENST00000467560 TSHZ1Q6ZSZ6 1077 aa16.79■□□□□ 0.28
ATPAF2-204ENST00000467560 TMEM192Q8IY95 271 aa16.79■□□□□ 0.28
ATPAF2-204ENST00000467560 ATP8B4Q8TF62 1192 aa16.79■□□□□ 0.28
ATPAF2-204ENST00000467560 HLA-CQ95604 372 aa16.79■□□□□ 0.28
ATPAF2-204ENST00000467560 ZNF577Q9BSK1 485 aa16.79■□□□□ 0.28
ATPAF2-204ENST00000467560 RNF26Q9BY78 433 aaPredicted RBP16.79■□□□□ 0.28
ATPAF2-204ENST00000467560 UPF3BQ9BZI7 483 aaKnown RBP16.79■□□□□ 0.28
ATPAF2-204ENST00000467560 CDHR5Q9HBB8 845 aa16.79■□□□□ 0.28
ATPAF2-204ENST00000467560 COG5Q9UP83 839 aa16.79■□□□□ 0.28
ATPAF2-204ENST00000467560 MYO7AQ13402 2215 aa16.79■□□□□ 0.28
ATPAF2-204ENST00000467560 BACH1O14867 736 aa16.78■□□□□ 0.28
ATPAF2-204ENST00000467560 DTNBO60941 627 aa16.78■□□□□ 0.28
ATPAF2-204ENST00000467560 KLRC1P26715 233 aa16.78■□□□□ 0.28
ATPAF2-204ENST00000467560 PRR16Q569H4 304 aa16.78■□□□□ 0.28
ATPAF2-204ENST00000467560 CRIPAKQ8N1N5 446 aa16.78■□□□□ 0.28
ATPAF2-204ENST00000467560 GJA10Q969M2 543 aa16.78■□□□□ 0.28
ATPAF2-204ENST00000467560 IL17RAQ96F46 866 aa16.78■□□□□ 0.28
ATPAF2-204ENST00000467560 TMX1Q9H3N1 280 aa16.78■□□□□ 0.28
ATPAF2-204ENST00000467560 ZNF302Q9NR11 478 aa16.78■□□□□ 0.28
ATPAF2-204ENST00000467560 PADI3Q9ULW8 664 aa16.78■□□□□ 0.28
ATPAF2-204ENST00000467560 TRPV2Q9Y5S1 764 aa16.78■□□□□ 0.28
ATPAF2-204ENST00000467560 SMIM35A0A1B0GVV1 85 aa16.77■□□□□ 0.28
ATPAF2-204ENST00000467560 H3BNC9 293 aa16.77■□□□□ 0.28
ATPAF2-204ENST00000467560 CIITAP33076 1130 aa16.77■□□□□ 0.28
ATPAF2-204ENST00000467560 SLC26A2P50443 739 aa16.77■□□□□ 0.28
ATPAF2-204ENST00000467560 TMEM266Q2M3C6 531 aa16.77■□□□□ 0.28
ATPAF2-204ENST00000467560 IER5Q5VY09 327 aa16.77■□□□□ 0.28
ATPAF2-204ENST00000467560 ERICH6BQ5W0A0 696 aa16.77■□□□□ 0.28
ATPAF2-204ENST00000467560 KIAA0319LQ8IZA0 1049 aa16.77■□□□□ 0.28
ATPAF2-204ENST00000467560 CCDC12Q8WUD4 166 aaPredicted RBP16.77■□□□□ 0.28
ATPAF2-204ENST00000467560 TMEM40Q8WWA1 233 aa16.77■□□□□ 0.28
ATPAF2-204ENST00000467560 ZNF689Q96CS4 500 aaPredicted RBP16.77■□□□□ 0.28
ATPAF2-204ENST00000467560 AIFM3Q96NN9 605 aa16.77■□□□□ 0.28
ATPAF2-204ENST00000467560 CELF4Q9BZC1 486 aaKnown RBP16.77■□□□□ 0.28
ATPAF2-204ENST00000467560 IGSF9BQ9UPX0 1349 aa16.76■□□□□ 0.27
ATPAF2-204ENST00000467560 TTC3P53804 2025 aa16.76■□□□□ 0.27
ATPAF2-204ENST00000467560 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.76■□□□□ 0.27
ATPAF2-204ENST00000467560 NEFLP07196 543 aa16.76■□□□□ 0.27
ATPAF2-204ENST00000467560 GNA11P29992 359 aa16.76■□□□□ 0.27
ATPAF2-204ENST00000467560 GPM6BQ13491 265 aa16.76■□□□□ 0.27
ATPAF2-204ENST00000467560 AAK1Q2M2I8 961 aa16.76■□□□□ 0.27
ATPAF2-204ENST00000467560 FAM160B1Q5W0V3 765 aa16.76■□□□□ 0.27
ATPAF2-204ENST00000467560 MIS18BP1Q6P0N0 1132 aa16.76■□□□□ 0.27
ATPAF2-204ENST00000467560 PDXDC2PQ6P474 469 aa16.76■□□□□ 0.27
ATPAF2-204ENST00000467560 TRMT1LQ7Z2T5 733 aaKnown RBP16.76■□□□□ 0.27
ATPAF2-204ENST00000467560 FIBCD1Q8N539 461 aa16.76■□□□□ 0.27
ATPAF2-204ENST00000467560 IL27Q8NEV9 243 aa16.76■□□□□ 0.27
ATPAF2-204ENST00000467560 MRPL38Q96DV4 380 aaKnown RBP16.76■□□□□ 0.27
ATPAF2-204ENST00000467560 MAFBQ9Y5Q3 323 aaPredicted RBP16.76■□□□□ 0.27
ATPAF2-204ENST00000467560 ADGRA3Q8IWK6 1321 aa16.75■□□□□ 0.27
ATPAF2-204ENST00000467560 MSH4O15457 936 aa16.75■□□□□ 0.27
ATPAF2-204ENST00000467560 HBP1O60381 514 aa16.75■□□□□ 0.27
ATPAF2-204ENST00000467560 MGEA5O60502 916 aa16.75■□□□□ 0.27
ATPAF2-204ENST00000467560 DGKIO75912 1065 aa16.75■□□□□ 0.27
ATPAF2-204ENST00000467560 C22orf31O95567 290 aa16.75■□□□□ 0.27
ATPAF2-204ENST00000467560 GATMP50440 423 aa16.75■□□□□ 0.27
ATPAF2-204ENST00000467560 SETQ01105 290 aaPredicted RBP16.75■□□□□ 0.27
ATPAF2-204ENST00000467560 KRT76Q01546 638 aa16.75■□□□□ 0.27
ATPAF2-204ENST00000467560 AKAP17AQ02040 695 aaKnown RBP16.75■□□□□ 0.27
ATPAF2-204ENST00000467560 STK3Q13188 491 aa16.75■□□□□ 0.27
ATPAF2-204ENST00000467560 NPY5RQ15761 445 aa16.75■□□□□ 0.27
ATPAF2-204ENST00000467560 ZNF746Q6NUN9 644 aaPredicted RBP16.75■□□□□ 0.27
ATPAF2-204ENST00000467560 SAMD11Q96NU1 681 aa16.75■□□□□ 0.27
ATPAF2-204ENST00000467560 PPP1R16BQ96T49 567 aa16.75■□□□□ 0.27
ATPAF2-204ENST00000467560 UBE2ZQ9H832 354 aaPredicted RBP16.75■□□□□ 0.27
ATPAF2-204ENST00000467560 TBC1D22BQ9NU19 505 aa16.75■□□□□ 0.27
ATPAF2-204ENST00000467560 GABBR1Q9UBS5 961 aa16.75■□□□□ 0.27
ATPAF2-204ENST00000467560 GINS2Q9Y248 185 aa16.75■□□□□ 0.27
ATPAF2-204ENST00000467560 NOC2LQ9Y3T9 749 aaKnown RBP16.75■□□□□ 0.27
ATPAF2-204ENST00000467560 CYP46A1Q9Y6A2 500 aa16.75■□□□□ 0.27
ATPAF2-204ENST00000467560 KDM3AQ9Y4C1 1321 aa16.74■□□□□ 0.27
ATPAF2-204ENST00000467560 M0R2N6 131 aa16.74■□□□□ 0.27
ATPAF2-204ENST00000467560 GRM6O15303 877 aa16.74■□□□□ 0.27
ATPAF2-204ENST00000467560 EPB41L2O43491 1005 aaKnown RBP16.74■□□□□ 0.27
ATPAF2-204ENST00000467560 CTNNB1P35222 781 aa16.74■□□□□ 0.27
ATPAF2-204ENST00000467560 PAK2Q13177 524 aa16.74■□□□□ 0.27
ATPAF2-204ENST00000467560 TCEAL5Q5H9L2 206 aa16.74■□□□□ 0.27
ATPAF2-204ENST00000467560 ZNF484Q5JVG2 852 aa16.74■□□□□ 0.27
ATPAF2-204ENST00000467560 MCTP2Q6DN12 878 aa16.74■□□□□ 0.27
ATPAF2-204ENST00000467560 NME8Q8N427 588 aa16.74■□□□□ 0.27
ATPAF2-204ENST00000467560 CCDC148Q8NFR7 591 aa16.74■□□□□ 0.27
ATPAF2-204ENST00000467560 TM6SF1Q9BZW5 370 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms