RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 CHST14Q8NCH0 376 aa5.48□□□□□ -1.53
VPS50-209ENST00000467326 DDX1Q92499 740 aaKnown RBP5.48□□□□□ -1.53
VPS50-209ENST00000467326 INTS7Q9NVH2 962 aaKnown RBP5.48□□□□□ -1.53
VPS50-209ENST00000467326 MAGEC2Q9UBF1 373 aaPredicted RBP5.48□□□□□ -1.53
VPS50-209ENST00000467326 B3GALT1Q9Y5Z6 326 aa5.48□□□□□ -1.53
VPS50-209ENST00000467326 KRT37O76014 449 aa5.47□□□□□ -1.53
VPS50-209ENST00000467326 SDSP20132 328 aa5.47□□□□□ -1.53
VPS50-209ENST00000467326 MC4RP32245 332 aa5.47□□□□□ -1.53
VPS50-209ENST00000467326 FLT3P36888 993 aa5.47□□□□□ -1.53
VPS50-209ENST00000467326 MECP2P51608 486 aaKnown RBP5.47□□□□□ -1.53
VPS50-209ENST00000467326 NFKB2Q00653 900 aa5.47□□□□□ -1.53
VPS50-209ENST00000467326 UBXN11Q5T124 520 aa5.47□□□□□ -1.53
VPS50-209ENST00000467326 PIK3R6Q5UE93 754 aa5.47□□□□□ -1.53
VPS50-209ENST00000467326 PKN3Q6P5Z2 889 aa5.47□□□□□ -1.53
VPS50-209ENST00000467326 OTOP1Q7RTM1 612 aa5.47□□□□□ -1.53
VPS50-209ENST00000467326 FERMT3Q86UX7 667 aa5.47□□□□□ -1.53
VPS50-209ENST00000467326 LGI4Q8N135 537 aa5.47□□□□□ -1.53
VPS50-209ENST00000467326 NUDT10Q8NFP7 164 aa5.47□□□□□ -1.53
VPS50-209ENST00000467326 NUDT11Q96G61 164 aa5.47□□□□□ -1.53
VPS50-209ENST00000467326 FEZ1Q99689 392 aa5.47□□□□□ -1.53
VPS50-209ENST00000467326 BDH2Q9BUT1 245 aa5.47□□□□□ -1.53
VPS50-209ENST00000467326 BARX1Q9HBU1 254 aaPredicted RBP5.47□□□□□ -1.53
VPS50-209ENST00000467326 CABP5Q9NP86 173 aa5.47□□□□□ -1.53
VPS50-209ENST00000467326 INCENPQ9NQS7 918 aa5.47□□□□□ -1.53
VPS50-209ENST00000467326 BTBD7Q9P203 1132 aa5.47□□□□□ -1.53
VPS50-209ENST00000467326 DUSP10Q9Y6W6 482 aa5.47□□□□□ -1.53
VPS50-209ENST00000467326 H0Y858 1186 aa5.46□□□□□ -1.54
VPS50-209ENST00000467326 FOXP2O15409 715 aa5.46□□□□□ -1.54
VPS50-209ENST00000467326 PRICKLE3O43900 615 aaPredicted RBP5.46□□□□□ -1.54
VPS50-209ENST00000467326 KLHL18O94889 574 aa5.46□□□□□ -1.54
VPS50-209ENST00000467326 IL18BPO95998 194 aa5.46□□□□□ -1.54
VPS50-209ENST00000467326 JMJD7P0C870 316 aa5.46□□□□□ -1.54
VPS50-209ENST00000467326 TMEM132BQ14DG7 1078 aa5.46□□□□□ -1.54
VPS50-209ENST00000467326 ZFYVE27Q5T4F4 411 aa5.46□□□□□ -1.54
VPS50-209ENST00000467326 PLEKHH3Q7Z736 793 aa5.46□□□□□ -1.54
VPS50-209ENST00000467326 NOP9Q86U38 636 aaKnown RBP5.46□□□□□ -1.54
VPS50-209ENST00000467326 KLHL36Q8N4N3 616 aa5.46□□□□□ -1.54
VPS50-209ENST00000467326 ASB15Q8WXK1 588 aa5.46□□□□□ -1.54
VPS50-209ENST00000467326 MBD6Q96DN6 1003 aa5.46□□□□□ -1.54
VPS50-209ENST00000467326 B4GALT3O60512 393 aa5.45□□□□□ -1.54
VPS50-209ENST00000467326 SDHAP31040 664 aa5.45□□□□□ -1.54
VPS50-209ENST00000467326 IL13RA1P78552 427 aa5.45□□□□□ -1.54
VPS50-209ENST00000467326 NFATC3Q12968 1075 aa5.45□□□□□ -1.54
VPS50-209ENST00000467326 ARHGAP44Q17R89 818 aa5.45□□□□□ -1.54
VPS50-209ENST00000467326 C21orf62-AS1Q17RA5 79 aa5.45□□□□□ -1.54
VPS50-209ENST00000467326 DPP8Q6V1X1 898 aaPredicted RBP5.45□□□□□ -1.54
VPS50-209ENST00000467326 UBE2R2Q712K3 238 aaPredicted RBP5.45□□□□□ -1.54
VPS50-209ENST00000467326 RALYLQ86SE5 291 aaKnown RBP5.45□□□□□ -1.54
VPS50-209ENST00000467326 REXO1L1PQ8IX06 675 aa5.45□□□□□ -1.54
VPS50-209ENST00000467326 HIPK4Q8NE63 616 aa5.45□□□□□ -1.54
VPS50-209ENST00000467326 DLG3Q92796 817 aa5.45□□□□□ -1.54
VPS50-209ENST00000467326 NINJ1Q92982 152 aa5.45□□□□□ -1.54
VPS50-209ENST00000467326 GBP4Q96PP9 640 aa5.45□□□□□ -1.54
VPS50-209ENST00000467326 PCIF1Q9H4Z3 704 aa5.45□□□□□ -1.54
VPS50-209ENST00000467326 PLAAQ9Y263 795 aa5.45□□□□□ -1.54
VPS50-209ENST00000467326 INVSQ9Y283 1065 aa5.45□□□□□ -1.54
VPS50-209ENST00000467326 MYRFQ9Y2G1 1151 aa5.45□□□□□ -1.54
VPS50-209ENST00000467326 TBX22Q9Y458 520 aa5.45□□□□□ -1.54
VPS50-209ENST00000467326 PTPDC1A2A3K4 754 aa5.44□□□□□ -1.54
VPS50-209ENST00000467326 RASSF10A6NK89 507 aa5.44□□□□□ -1.54
VPS50-209ENST00000467326 CBX4O00257 560 aa5.44□□□□□ -1.54
VPS50-209ENST00000467326 ENPP3O14638 875 aa5.44□□□□□ -1.54
VPS50-209ENST00000467326 KPNA6O60684 536 aa5.44□□□□□ -1.54
VPS50-209ENST00000467326 MPIG6BO95866 241 aa5.44□□□□□ -1.54
VPS50-209ENST00000467326 ZBTB48P10074 688 aaPredicted RBP5.44□□□□□ -1.54
VPS50-209ENST00000467326 WDR72Q3MJ13 1102 aa5.44□□□□□ -1.54
VPS50-209ENST00000467326 CFAP100Q494V2 611 aa5.44□□□□□ -1.54
VPS50-209ENST00000467326 CATSPEREQ5SY80 951 aa5.44□□□□□ -1.54
VPS50-209ENST00000467326 CDCA2Q69YH5 1023 aaPredicted RBP5.44□□□□□ -1.54
VPS50-209ENST00000467326 Q6ZUG5 572 aa5.44□□□□□ -1.54
VPS50-209ENST00000467326 KBTBD2Q8IY47 623 aa5.44□□□□□ -1.54
VPS50-209ENST00000467326 NIM1KQ8IY84 436 aa5.44□□□□□ -1.54
VPS50-209ENST00000467326 WNK4Q96J92 1243 aa5.44□□□□□ -1.54
VPS50-209ENST00000467326 UCKL1Q9NWZ5 548 aa5.44□□□□□ -1.54
VPS50-209ENST00000467326 GALNT8Q9NY28 637 aa5.44□□□□□ -1.54
VPS50-209ENST00000467326 ADAM29Q9UKF5 820 aa5.44□□□□□ -1.54
VPS50-209ENST00000467326 ASB1Q9Y576 335 aa5.44□□□□□ -1.54
VPS50-209ENST00000467326 H7C1D1 291 aa5.43□□□□□ -1.54
VPS50-209ENST00000467326 CUTAO60888 179 aa5.43□□□□□ -1.54
VPS50-209ENST00000467326 IGSF3O75054 1194 aa5.43□□□□□ -1.54
VPS50-209ENST00000467326 PLATP00750 562 aa5.43□□□□□ -1.54
VPS50-209ENST00000467326 FNTBP49356 437 aa5.43□□□□□ -1.54
VPS50-209ENST00000467326 KIF11P52732 1056 aa5.43□□□□□ -1.54
VPS50-209ENST00000467326 PLP2Q04941 152 aa5.43□□□□□ -1.54
VPS50-209ENST00000467326 CC2D1AQ6P1N0 951 aaPredicted RBP5.43□□□□□ -1.54
VPS50-209ENST00000467326 LRSAM1Q6UWE0 723 aa5.43□□□□□ -1.54
VPS50-209ENST00000467326 GPR155Q7Z3F1 870 aa5.43□□□□□ -1.54
VPS50-209ENST00000467326 LRRTM3Q86VH5 581 aa5.43□□□□□ -1.54
VPS50-209ENST00000467326 IFNL2Q8IZJ0 200 aa5.43□□□□□ -1.54
VPS50-209ENST00000467326 MFSD3Q96ES6 412 aa5.43□□□□□ -1.54
VPS50-209ENST00000467326 BTBD2Q9BX70 525 aa5.43□□□□□ -1.54
VPS50-209ENST00000467326 OR10A5Q9H207 317 aa5.43□□□□□ -1.54
VPS50-209ENST00000467326 CNOT11Q9UKZ1 510 aaKnown RBP5.43□□□□□ -1.54
VPS50-209ENST00000467326 PRAMEF22A3QJZ6 481 aa5.42□□□□□ -1.54
VPS50-209ENST00000467326 TRAF5O00463 557 aa5.42□□□□□ -1.54
VPS50-209ENST00000467326 LAMTOR5O43504 91 aa5.42□□□□□ -1.54
VPS50-209ENST00000467326 POLD1P28340 1107 aa5.42□□□□□ -1.54
VPS50-209ENST00000467326 CSF2RBP32927 897 aa5.42□□□□□ -1.54
VPS50-209ENST00000467326 ADCY8P40145 1251 aa5.42□□□□□ -1.54
VPS50-209ENST00000467326 ECE1P42892 770 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms