RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 COL5A3P25940 1745 aaPredicted RBP16.97■□□□□ 0.31
CHD1L-205ENST00000467213 NCANO14594 1321 aa16.97■□□□□ 0.31
CHD1L-205ENST00000467213 ATP6V1G2O95670 118 aa16.97■□□□□ 0.31
CHD1L-205ENST00000467213 ALADP13716 330 aa16.97■□□□□ 0.31
CHD1L-205ENST00000467213 HIBADHP31937 336 aaKnown RBP16.97■□□□□ 0.31
CHD1L-205ENST00000467213 PTENP60484 403 aa16.97■□□□□ 0.31
CHD1L-205ENST00000467213 ZNF571Q7Z3V5 609 aaPredicted RBP16.97■□□□□ 0.31
CHD1L-205ENST00000467213 FAM133AQ8N9E0 248 aa16.97■□□□□ 0.31
CHD1L-205ENST00000467213 NEDD1Q8NHV4 660 aa16.97■□□□□ 0.31
CHD1L-205ENST00000467213 SNX29Q8TEQ0 813 aa16.97■□□□□ 0.31
CHD1L-205ENST00000467213 TRAF3IP3Q9Y228 551 aa16.97■□□□□ 0.31
CHD1L-205ENST00000467213 CCDC169A6NNP5 214 aa16.96■□□□□ 0.31
CHD1L-205ENST00000467213 USP17L8P0C7I0 530 aa16.96■□□□□ 0.31
CHD1L-205ENST00000467213 TMOD1P28289 359 aa16.96■□□□□ 0.31
CHD1L-205ENST00000467213 ATP2B2Q01814 1243 aa16.96■□□□□ 0.31
CHD1L-205ENST00000467213 DHX34Q14147 1143 aaKnown RBP16.96■□□□□ 0.31
CHD1L-205ENST00000467213 SPRED3Q2MJR0 410 aa16.96■□□□□ 0.31
CHD1L-205ENST00000467213 NT5DC3Q86UY8 548 aa16.96■□□□□ 0.31
CHD1L-205ENST00000467213 COL23A1Q86Y22 540 aaPredicted RBP16.96■□□□□ 0.31
CHD1L-205ENST00000467213 CUL5Q93034 780 aa16.96■□□□□ 0.31
CHD1L-205ENST00000467213 PACSIN2Q9UNF0 486 aaPredicted RBP16.96■□□□□ 0.31
CHD1L-205ENST00000467213 CETN3O15182 167 aa16.96■□□□□ 0.31
CHD1L-205ENST00000467213 RASA1P20936 1047 aa16.96■□□□□ 0.31
CHD1L-205ENST00000467213 GSTO1P78417 241 aa16.96■□□□□ 0.31
CHD1L-205ENST00000467213 KRT71Q3SY84 523 aa16.96■□□□□ 0.31
CHD1L-205ENST00000467213 TNFAIP8L3Q5GJ75 292 aa16.96■□□□□ 0.31
CHD1L-205ENST00000467213 ALKBH5Q6P6C2 394 aaKnown RBP16.96■□□□□ 0.31
CHD1L-205ENST00000467213 PEX26Q7Z412 305 aa16.96■□□□□ 0.31
CHD1L-205ENST00000467213 STMN4Q9H169 189 aaPredicted RBP16.96■□□□□ 0.31
CHD1L-205ENST00000467213 IRS2Q9Y4H2 1338 aa16.96■□□□□ 0.3
CHD1L-205ENST00000467213 MYH14Q7Z406 1995 aaKnown RBP16.95■□□□□ 0.3
CHD1L-205ENST00000467213 EDIL3O43854 480 aa16.95■□□□□ 0.3
CHD1L-205ENST00000467213 RTN2O75298 545 aa16.95■□□□□ 0.3
CHD1L-205ENST00000467213 JAM2P57087 298 aa16.95■□□□□ 0.3
CHD1L-205ENST00000467213 DHX9Q08211 1270 aaKnown RBP16.95■□□□□ 0.3
CHD1L-205ENST00000467213 ZNF268Q14587 947 aaPredicted RBP16.95■□□□□ 0.3
CHD1L-205ENST00000467213 MSL1Q68DK7 614 aa16.95■□□□□ 0.3
CHD1L-205ENST00000467213 DUPD1Q68J44 220 aa16.95■□□□□ 0.3
CHD1L-205ENST00000467213 OR2W6PQ8NHA6 318 aa16.95■□□□□ 0.3
CHD1L-205ENST00000467213 FMO2Q99518 471 aa16.95■□□□□ 0.3
CHD1L-205ENST00000467213 PABPC3Q9H361 631 aaKnown RBP16.95■□□□□ 0.3
CHD1L-205ENST00000467213 ZDHHC18Q9NUE0 388 aa16.95■□□□□ 0.3
CHD1L-205ENST00000467213 SNED1Q8TER0 1413 aa16.95■□□□□ 0.3
CHD1L-205ENST00000467213 PLIN4Q96Q06 1357 aa16.95■□□□□ 0.3
CHD1L-205ENST00000467213 DAPK3O43293 454 aa16.95■□□□□ 0.3
CHD1L-205ENST00000467213 AGTP01019 485 aa16.95■□□□□ 0.3
CHD1L-205ENST00000467213 H2AFZP0C0S5 128 aa16.95■□□□□ 0.3
CHD1L-205ENST00000467213 PDHBP11177 359 aa16.95■□□□□ 0.3
CHD1L-205ENST00000467213 HSPA6P17066 643 aa16.95■□□□□ 0.3
CHD1L-205ENST00000467213 KCNH2Q12809 1159 aa16.95■□□□□ 0.3
CHD1L-205ENST00000467213 H2AFVQ71UI9 128 aa16.95■□□□□ 0.3
CHD1L-205ENST00000467213 ATP8B4Q8TF62 1192 aa16.95■□□□□ 0.3
CHD1L-205ENST00000467213 ATXN2LQ8WWM7 1075 aaKnown RBP16.95■□□□□ 0.3
CHD1L-205ENST00000467213 CARD9Q9H257 536 aa16.95■□□□□ 0.3
CHD1L-205ENST00000467213 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.95■□□□□ 0.3
CHD1L-205ENST00000467213 UCHL3P15374 230 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 CRKLP46109 303 aaKnown RBP16.94■□□□□ 0.3
CHD1L-205ENST00000467213 BANK1Q8NDB2 785 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 ANKRD27Q96NW4 1050 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 CENPHQ9H3R5 247 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 NOD2Q9HC29 1040 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 USP17L3A6NCW0 530 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 USP17L4A6NCW7 530 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 TCEAL1Q15170 157 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 C6orf118Q5T5N4 469 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 USP17L1Q7RTZ2 530 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 GBP7Q8N8V2 638 aaPredicted RBP16.94■□□□□ 0.3
CHD1L-205ENST00000467213 NSRP1Q9H0G5 558 aaKnown RBP16.94■□□□□ 0.3
CHD1L-205ENST00000467213 DDX47Q9H0S4 455 aaKnown RBP16.94■□□□□ 0.3
CHD1L-205ENST00000467213 METTL14Q9HCE5 456 aaKnown RBP16.94■□□□□ 0.3
CHD1L-205ENST00000467213 KCNMB3Q9NPA1 279 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 COL24A1Q17RW2 1714 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 AFF2P51816 1311 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 KIF3CO14782 793 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 SLC16A3O15427 465 aaKnown RBP16.94■□□□□ 0.3
CHD1L-205ENST00000467213 BAG3O95817 575 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 PRDX5P30044 214 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 FLT3P36888 993 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 EPS15P42566 896 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 ADCY7P51828 1080 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 HADHBP55084 474 aaKnown RBP16.94■□□□□ 0.3
CHD1L-205ENST00000467213 ADCY2Q08462 1091 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 C16orf86Q6ZW13 317 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 KCNK18Q7Z418 384 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 DDX42Q86XP3 938 aaKnown RBP eCLIP16.94■□□□□ 0.3
CHD1L-205ENST00000467213 SCFD1Q8WVM8 642 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 RSRC1Q96IZ7 334 aaKnown RBP16.94■□□□□ 0.3
CHD1L-205ENST00000467213 AMACRQ9UHK6 382 aa16.94■□□□□ 0.3
CHD1L-205ENST00000467213 TAF1P21675 1872 aa16.93■□□□□ 0.3
CHD1L-205ENST00000467213 CCDC189A1A4V9 331 aa16.93■□□□□ 0.3
CHD1L-205ENST00000467213 AFPP02771 609 aaKnown RBP16.93■□□□□ 0.3
CHD1L-205ENST00000467213 FERP16591 822 aa16.93■□□□□ 0.3
CHD1L-205ENST00000467213 CLK2P49760 499 aaKnown RBP16.93■□□□□ 0.3
CHD1L-205ENST00000467213 ZNF131P52739 623 aa16.93■□□□□ 0.3
CHD1L-205ENST00000467213 PLCD4Q9BRC7 762 aa16.93■□□□□ 0.3
CHD1L-205ENST00000467213 ERP44Q9BS26 406 aa16.93■□□□□ 0.3
CHD1L-205ENST00000467213 EPB41L4BQ9H329 900 aa16.93■□□□□ 0.3
CHD1L-205ENST00000467213 PARP2Q9UGN5 583 aa16.93■□□□□ 0.3
CHD1L-205ENST00000467213 AMFRQ9UKV5 643 aa16.93■□□□□ 0.3
CHD1L-205ENST00000467213 SLC37A4O43826 429 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms