RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 RIC8AQ9NPQ8 531 aa13.64□□□□□ -0.23
GTF3A-205ENST00000466776 TCEAL9Q9UHQ7 104 aa13.64□□□□□ -0.23
GTF3A-205ENST00000466776 PRR33A8MZF0 331 aa13.63□□□□□ -0.23
GTF3A-205ENST00000466776 ZBTB43O43298 467 aa13.63□□□□□ -0.23
GTF3A-205ENST00000466776 DGKIO75912 1065 aa13.63□□□□□ -0.23
GTF3A-205ENST00000466776 MMP1P03956 469 aa13.63□□□□□ -0.23
GTF3A-205ENST00000466776 CD52P31358 61 aa13.63□□□□□ -0.23
GTF3A-205ENST00000466776 ACTR2P61160 394 aa13.63□□□□□ -0.23
GTF3A-205ENST00000466776 KRT32Q14532 448 aa13.63□□□□□ -0.23
GTF3A-205ENST00000466776 COL19A1Q14993 1142 aa13.63□□□□□ -0.23
GTF3A-205ENST00000466776 CEP55Q53EZ4 464 aa13.63□□□□□ -0.23
GTF3A-205ENST00000466776 MARCH8Q5T0T0 291 aa13.63□□□□□ -0.23
GTF3A-205ENST00000466776 FAM160B1Q5W0V3 765 aa13.63□□□□□ -0.23
GTF3A-205ENST00000466776 WWC2Q6AWC2 1192 aa13.63□□□□□ -0.23
GTF3A-205ENST00000466776 P2RX5Q93086 422 aa13.63□□□□□ -0.23
GTF3A-205ENST00000466776 ZNF689Q96CS4 500 aaPredicted RBP13.63□□□□□ -0.23
GTF3A-205ENST00000466776 RC3H2Q9HBD1 1191 aaKnown RBP13.63□□□□□ -0.23
GTF3A-205ENST00000466776 CD320Q9NPF0 282 aa13.63□□□□□ -0.23
GTF3A-205ENST00000466776 LRFN2Q9ULH4 789 aa13.63□□□□□ -0.23
GTF3A-205ENST00000466776 PCDHA2Q9Y5H9 948 aa13.63□□□□□ -0.23
GTF3A-205ENST00000466776 PLXNA4Q9HCM2 1894 aa13.63□□□□□ -0.23
GTF3A-205ENST00000466776 IGSF9BQ9UPX0 1349 aa13.63□□□□□ -0.23
GTF3A-205ENST00000466776 SMIM35A0A1B0GVV1 85 aa13.62□□□□□ -0.23
GTF3A-205ENST00000466776 POTEB3A0JP26 581 aa13.62□□□□□ -0.23
GTF3A-205ENST00000466776 FAM86C2PA6NEL3 165 aa13.62□□□□□ -0.23
GTF3A-205ENST00000466776 BACH1O14867 736 aa13.62□□□□□ -0.23
GTF3A-205ENST00000466776 FGD1P98174 961 aa13.62□□□□□ -0.23
GTF3A-205ENST00000466776 KRT76Q01546 638 aa13.62□□□□□ -0.23
GTF3A-205ENST00000466776 PLCB4Q15147 1175 aa13.62□□□□□ -0.23
GTF3A-205ENST00000466776 POTEBQ6S5H4 581 aa13.62□□□□□ -0.23
GTF3A-205ENST00000466776 DHX32Q7L7V1 743 aaKnown RBP13.62□□□□□ -0.23
GTF3A-205ENST00000466776 KHSRPQ92945 711 aaKnown RBP eCLIP13.62□□□□□ -0.239e-6■□□□□ 10.6
GTF3A-205ENST00000466776 CELF4Q9BZC1 486 aaKnown RBP13.62□□□□□ -0.23
GTF3A-205ENST00000466776 KDM3AQ9Y4C1 1321 aa13.62□□□□□ -0.23
GTF3A-205ENST00000466776 COL1A2P08123 1366 aa13.61□□□□□ -0.23
GTF3A-205ENST00000466776 CCDC196A0A1B0GTZ2 297 aa13.61□□□□□ -0.23
GTF3A-205ENST00000466776 SMCO2A6NFE2 343 aa13.61□□□□□ -0.23
GTF3A-205ENST00000466776 GOLGA8AA7E2F4 631 aa13.61□□□□□ -0.23
GTF3A-205ENST00000466776 GOLGA8BA8MQT2 603 aa13.61□□□□□ -0.23
GTF3A-205ENST00000466776 GRM6O15303 877 aa13.61□□□□□ -0.23
GTF3A-205ENST00000466776 DCXO43602 365 aa13.61□□□□□ -0.23
GTF3A-205ENST00000466776 HBP1O60381 514 aa13.61□□□□□ -0.23
GTF3A-205ENST00000466776 HMGB1P09429 215 aaKnown RBP13.61□□□□□ -0.23
GTF3A-205ENST00000466776 SCG2P13521 617 aa13.61□□□□□ -0.23
GTF3A-205ENST00000466776 SREBF1P36956 1147 aa13.61□□□□□ -0.23
GTF3A-205ENST00000466776 RCAN1P53805 252 aa13.61□□□□□ -0.23
GTF3A-205ENST00000466776 BMP2KLQ5H9B9 411 aa13.61□□□□□ -0.23
GTF3A-205ENST00000466776 MCTP2Q6DN12 878 aa13.61□□□□□ -0.23
GTF3A-205ENST00000466776 NIPA1Q7RTP0 329 aa13.61□□□□□ -0.23
GTF3A-205ENST00000466776 ADHFE1Q8IWW8 467 aa13.61□□□□□ -0.23
GTF3A-205ENST00000466776 CCDC12Q8WUD4 166 aaPredicted RBP13.61□□□□□ -0.23
GTF3A-205ENST00000466776 PCYT2Q99447 389 aa13.61□□□□□ -0.23
GTF3A-205ENST00000466776 AGO3Q9H9G7 860 aaKnown RBP13.61□□□□□ -0.23
GTF3A-205ENST00000466776 AGO4Q9HCK5 861 aaKnown RBP13.61□□□□□ -0.23
GTF3A-205ENST00000466776 C11orf16Q9NQ32 467 aa13.61□□□□□ -0.23
GTF3A-205ENST00000466776 BARHL2Q9NY43 387 aa13.61□□□□□ -0.23
GTF3A-205ENST00000466776 PADI3Q9ULW8 664 aa13.61□□□□□ -0.23
GTF3A-205ENST00000466776 RBAK-RBAKDNI3L0D1 243 aa13.6□□□□□ -0.23
GTF3A-205ENST00000466776 STXBP3O00186 592 aa13.6□□□□□ -0.23
GTF3A-205ENST00000466776 MEIS1O00470 390 aa13.6□□□□□ -0.23
GTF3A-205ENST00000466776 LINC00271P0C7V0 271 aa13.6□□□□□ -0.23
GTF3A-205ENST00000466776 ARP10275 920 aa13.6□□□□□ -0.23
GTF3A-205ENST00000466776 NDUFV1P49821 464 aa13.6□□□□□ -0.23
GTF3A-205ENST00000466776 SETQ01105 290 aaPredicted RBP13.6□□□□□ -0.23
GTF3A-205ENST00000466776 ZP2Q05996 745 aa13.6□□□□□ -0.23
GTF3A-205ENST00000466776 TMEM62Q0P6H9 643 aa13.6□□□□□ -0.23
GTF3A-205ENST00000466776 HYAL1Q12794 435 aa13.6□□□□□ -0.23
GTF3A-205ENST00000466776 MIS18BP1Q6P0N0 1132 aa13.6□□□□□ -0.23
GTF3A-205ENST00000466776 MTHFD1LQ6UB35 978 aa13.6□□□□□ -0.23
GTF3A-205ENST00000466776 CYP2W1Q8TAV3 490 aa13.6□□□□□ -0.23
GTF3A-205ENST00000466776 PGBD1Q96JS3 809 aa13.6□□□□□ -0.23
GTF3A-205ENST00000466776 UIMC1Q96RL1 719 aa13.6□□□□□ -0.23
GTF3A-205ENST00000466776 AAASQ9NRG9 546 aa13.6□□□□□ -0.23
GTF3A-205ENST00000466776 NAP1L2Q9ULW6 460 aaPredicted RBP13.6□□□□□ -0.23
GTF3A-205ENST00000466776 PLAGL2Q9UPG8 496 aa13.6□□□□□ -0.23
GTF3A-205ENST00000466776 V9GY48 417 aaPredicted RBP13.6□□□□□ -0.23
GTF3A-205ENST00000466776 KLF18A0A0U1RQI7 1052 aa13.59□□□□□ -0.23
GTF3A-205ENST00000466776 FSD2A1L4K1 749 aa13.59□□□□□ -0.23
GTF3A-205ENST00000466776 DENND3A2RUS2 1198 aa13.59□□□□□ -0.23
GTF3A-205ENST00000466776 DDX39AO00148 427 aaKnown RBP13.59□□□□□ -0.23
GTF3A-205ENST00000466776 CSPG5O95196 566 aa13.59□□□□□ -0.23
GTF3A-205ENST00000466776 ATG7O95352 703 aa13.59□□□□□ -0.23
GTF3A-205ENST00000466776 KLRC1P26715 233 aa13.59□□□□□ -0.23
GTF3A-205ENST00000466776 SARSP49591 514 aaKnown RBP13.59□□□□□ -0.23
GTF3A-205ENST00000466776 NFX1Q12986 1120 aaKnown RBP13.59□□□□□ -0.23
GTF3A-205ENST00000466776 ITGB3BPQ13352 177 aaPredicted RBP13.59□□□□□ -0.23
GTF3A-205ENST00000466776 SMAD4Q13485 552 aaKnown RBP13.59□□□□□ -0.23
GTF3A-205ENST00000466776 CTC1Q2NKJ3 1217 aa13.59□□□□□ -0.23
GTF3A-205ENST00000466776 PAN2Q504Q3 1202 aaKnown RBP13.59□□□□□ -0.23
GTF3A-205ENST00000466776 ZNF484Q5JVG2 852 aa13.59□□□□□ -0.23
GTF3A-205ENST00000466776 SPOUT1Q5T280 376 aaKnown RBP13.59□□□□□ -0.23
GTF3A-205ENST00000466776 PDXDC2PQ6P474 469 aa13.59□□□□□ -0.23
GTF3A-205ENST00000466776 PLA2G4DQ86XP0 818 aa13.59□□□□□ -0.23
GTF3A-205ENST00000466776 CKAP2LQ8IYA6 745 aa13.59□□□□□ -0.23
GTF3A-205ENST00000466776 ATP8B4Q8TF62 1192 aa13.59□□□□□ -0.23
GTF3A-205ENST00000466776 TRAPPC12Q8WVT3 735 aa13.59□□□□□ -0.23
GTF3A-205ENST00000466776 LINC01599Q8WXQ3 324 aa13.59□□□□□ -0.23
GTF3A-205ENST00000466776 IGFLR1Q9H665 355 aa13.59□□□□□ -0.23
GTF3A-205ENST00000466776 ALG13Q9NP73 1137 aaKnown RBP13.59□□□□□ -0.23
GTF3A-205ENST00000466776 ZNF302Q9NR11 478 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms