RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 OSBPL7Q9BZF2 842 aa19.89■□□□□ 0.77
COL7A1-206ENST00000466591 ZMYND12Q9H0C1 365 aa19.89■□□□□ 0.77
COL7A1-206ENST00000466591 TBC1D22BQ9NU19 505 aa19.89■□□□□ 0.77
COL7A1-206ENST00000466591 LRFN2Q9ULH4 789 aa19.89■□□□□ 0.77
COL7A1-206ENST00000466591 RWDD3Q9Y3V2 267 aa19.89■□□□□ 0.77
COL7A1-206ENST00000466591 PCDHA2Q9Y5H9 948 aa19.89■□□□□ 0.77
COL7A1-206ENST00000466591 CYP46A1Q9Y6A2 500 aa19.89■□□□□ 0.77
COL7A1-206ENST00000466591 SIP14410 1827 aa19.88■□□□□ 0.77
COL7A1-206ENST00000466591 FAM86B1E9PN63 330 aa19.88■□□□□ 0.77
COL7A1-206ENST00000466591 HBP1O60381 514 aa19.88■□□□□ 0.77
COL7A1-206ENST00000466591 FAM86B2P0C5J1 330 aa19.88■□□□□ 0.77
COL7A1-206ENST00000466591 CD52P31358 61 aa19.88■□□□□ 0.77
COL7A1-206ENST00000466591 KRT76Q01546 638 aa19.88■□□□□ 0.77
COL7A1-206ENST00000466591 MGAT3Q09327 533 aa19.88■□□□□ 0.77
COL7A1-206ENST00000466591 BTG3Q14201 252 aaPredicted RBP19.88■□□□□ 0.77
COL7A1-206ENST00000466591 MARCH8Q5T0T0 291 aa19.88■□□□□ 0.77
COL7A1-206ENST00000466591 SWSAP1Q6NVH7 229 aa19.88■□□□□ 0.77
COL7A1-206ENST00000466591 SP7Q8TDD2 431 aaPredicted RBP19.88■□□□□ 0.77
COL7A1-206ENST00000466591 PRRC2BQ5JSZ5 2229 aaKnown RBP19.88■□□□□ 0.77
COL7A1-206ENST00000466591 ADGRA3Q8IWK6 1321 aa19.87■□□□□ 0.77
COL7A1-206ENST00000466591 PSAPP07602 524 aa19.87■□□□□ 0.77
COL7A1-206ENST00000466591 SSRP1Q08945 709 aaKnown RBP19.87■□□□□ 0.77
COL7A1-206ENST00000466591 NFX1Q12986 1120 aaKnown RBP19.87■□□□□ 0.77
COL7A1-206ENST00000466591 ODR4Q5SWX8 454 aa19.87■□□□□ 0.77
COL7A1-206ENST00000466591 RUFY3Q7L099 469 aa19.87■□□□□ 0.77
COL7A1-206ENST00000466591 NME8Q8N427 588 aa19.87■□□□□ 0.77
COL7A1-206ENST00000466591 ATP8B4Q8TF62 1192 aa19.87■□□□□ 0.77
COL7A1-206ENST00000466591 KCNB2Q92953 911 aa19.87■□□□□ 0.77
COL7A1-206ENST00000466591 MRPL38Q96DV4 380 aaKnown RBP19.87■□□□□ 0.77
COL7A1-206ENST00000466591 NECAB3Q96P71 396 aaPredicted RBP19.87■□□□□ 0.77
COL7A1-206ENST00000466591 VPS54Q9P1Q0 977 aa19.87■□□□□ 0.77
COL7A1-206ENST00000466591 SMIM35A0A1B0GVV1 85 aa19.86■□□□□ 0.77
COL7A1-206ENST00000466591 CCNE2O96020 404 aa19.86■□□□□ 0.77
COL7A1-206ENST00000466591 CYP3A4P08684 503 aa19.86■□□□□ 0.77
COL7A1-206ENST00000466591 STAG3L1P0CL83 205 aa19.86■□□□□ 0.77
COL7A1-206ENST00000466591 BMP1P13497 986 aa19.86■□□□□ 0.77
COL7A1-206ENST00000466591 KLRC1P26715 233 aa19.86■□□□□ 0.77
COL7A1-206ENST00000466591 MKRN4PQ13434 485 aaPredicted RBP19.86■□□□□ 0.77
COL7A1-206ENST00000466591 MTHFD1LQ6UB35 978 aa19.86■□□□□ 0.77
COL7A1-206ENST00000466591 SMAP1Q8IYB5 467 aaPredicted RBP19.86■□□□□ 0.77
COL7A1-206ENST00000466591 METTL13Q8N6R0 699 aa19.86■□□□□ 0.77
COL7A1-206ENST00000466591 RASGRP4Q8TDF6 673 aa19.86■□□□□ 0.77
COL7A1-206ENST00000466591 C11orf84Q9BUA3 381 aaPredicted RBP19.86■□□□□ 0.77
COL7A1-206ENST00000466591 CELF4Q9BZC1 486 aaKnown RBP19.86■□□□□ 0.77
COL7A1-206ENST00000466591 NCOA5Q9HCD5 579 aaKnown RBP19.86■□□□□ 0.77
COL7A1-206ENST00000466591 CEP131Q9UPN4 1083 aa19.86■□□□□ 0.77
COL7A1-206ENST00000466591 COL1A2P08123 1366 aa19.85■□□□□ 0.77
COL7A1-206ENST00000466591 H3BNC9 293 aa19.85■□□□□ 0.77
COL7A1-206ENST00000466591 ENPP3O14638 875 aa19.85■□□□□ 0.77
COL7A1-206ENST00000466591 CSPG5O95196 566 aa19.85■□□□□ 0.77
COL7A1-206ENST00000466591 KCNA5P22460 613 aa19.85■□□□□ 0.77
COL7A1-206ENST00000466591 ZNF484Q5JVG2 852 aa19.85■□□□□ 0.77
COL7A1-206ENST00000466591 ZNF746Q6NUN9 644 aaPredicted RBP19.85■□□□□ 0.77
COL7A1-206ENST00000466591 ABHD15Q6UXT9 468 aa19.85■□□□□ 0.77
COL7A1-206ENST00000466591 CCDC60Q8IWA6 550 aaPredicted RBP19.85■□□□□ 0.77
COL7A1-206ENST00000466591 BANK1Q8NDB2 785 aa19.85■□□□□ 0.77
COL7A1-206ENST00000466591 UBE2ZQ9H832 354 aaPredicted RBP19.85■□□□□ 0.77
COL7A1-206ENST00000466591 RNF216Q9NWF9 866 aaPredicted RBP19.85■□□□□ 0.77
COL7A1-206ENST00000466591 SQORQ9Y6N5 450 aa19.85■□□□□ 0.77
COL7A1-206ENST00000466591 NID2Q14112 1375 aa19.84■□□□□ 0.77
COL7A1-206ENST00000466591 VCANP13611 3396 aa19.84■□□□□ 0.77
COL7A1-206ENST00000466591 DENND3A2RUS2 1198 aa19.84■□□□□ 0.77
COL7A1-206ENST00000466591 RPS6KA5O75582 802 aa19.84■□□□□ 0.77
COL7A1-206ENST00000466591 ATG7O95352 703 aa19.84■□□□□ 0.77
COL7A1-206ENST00000466591 IFNAR1P17181 557 aa19.84■□□□□ 0.77
COL7A1-206ENST00000466591 PDIA3P30101 505 aaKnown RBP19.84■□□□□ 0.77
COL7A1-206ENST00000466591 STK3Q13188 491 aa19.84■□□□□ 0.77
COL7A1-206ENST00000466591 SPOUT1Q5T280 376 aaKnown RBP19.84■□□□□ 0.77
COL7A1-206ENST00000466591 C22orf23Q9BZE7 217 aa19.84■□□□□ 0.77
COL7A1-206ENST00000466591 AGO3Q9H9G7 860 aaKnown RBP19.84■□□□□ 0.77
COL7A1-206ENST00000466591 PADI3Q9ULW8 664 aa19.84■□□□□ 0.77
COL7A1-206ENST00000466591 PCDHA10Q9Y5I2 948 aa19.84■□□□□ 0.77
COL7A1-206ENST00000466591 CHD7Q9P2D1 2997 aa19.83■□□□□ 0.77
COL7A1-206ENST00000466591 IGSF9BQ9UPX0 1349 aa19.83■□□□□ 0.77
COL7A1-206ENST00000466591 IGLV3-22A0A075B6J6 115 aa19.83■□□□□ 0.77
COL7A1-206ENST00000466591 WDR64B1ANS9 1081 aa19.83■□□□□ 0.77
COL7A1-206ENST00000466591 CHMP2AO43633 222 aa19.83■□□□□ 0.77
COL7A1-206ENST00000466591 GAS7O60861 476 aa19.83■□□□□ 0.77
COL7A1-206ENST00000466591 PKN1Q16512 942 aa19.83■□□□□ 0.77
COL7A1-206ENST00000466591 TMEM266Q2M3C6 531 aa19.83■□□□□ 0.77
COL7A1-206ENST00000466591 PAN2Q504Q3 1202 aaKnown RBP19.83■□□□□ 0.77
COL7A1-206ENST00000466591 NPAS4Q8IUM7 802 aa19.83■□□□□ 0.77
COL7A1-206ENST00000466591 FBXL16Q8N461 479 aa19.83■□□□□ 0.77
COL7A1-206ENST00000466591 BBXQ8WY36 941 aaPredicted RBP19.83■□□□□ 0.77
COL7A1-206ENST00000466591 FAM167AQ96KS9 214 aa19.83■□□□□ 0.77
COL7A1-206ENST00000466591 SCLT1Q96NL6 688 aa19.83■□□□□ 0.77
COL7A1-206ENST00000466591 MAP7D2Q96T17 732 aa19.83■□□□□ 0.77
COL7A1-206ENST00000466591 PPP1R16BQ96T49 567 aa19.83■□□□□ 0.77
COL7A1-206ENST00000466591 NSUN3Q9H649 340 aaKnown RBP19.83■□□□□ 0.77
COL7A1-206ENST00000466591 GABBR1Q9UBS5 961 aa19.83■□□□□ 0.77
COL7A1-206ENST00000466591 TCF20Q9UGU0 1960 aaKnown RBP19.83■□□□□ 0.76
COL7A1-206ENST00000466591 EPB41L2O43491 1005 aaKnown RBP19.82■□□□□ 0.76
COL7A1-206ENST00000466591 DEXIO95424 95 aa19.82■□□□□ 0.76
COL7A1-206ENST00000466591 RB1P06400 928 aa19.82■□□□□ 0.76
COL7A1-206ENST00000466591 TMOD1P28289 359 aa19.82■□□□□ 0.76
COL7A1-206ENST00000466591 AGXT2Q9BYV1 514 aa19.82■□□□□ 0.76
COL7A1-206ENST00000466591 UPF3BQ9BZI7 483 aaKnown RBP19.82■□□□□ 0.76
COL7A1-206ENST00000466591 ZSWIM6Q9HCJ5 1215 aa19.82■□□□□ 0.76
COL7A1-206ENST00000466591 SH3GLB2Q9NR46 395 aa19.82■□□□□ 0.76
COL7A1-206ENST00000466591 PDRG1Q9NUG6 133 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms