RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 BEX3Q00994 111 aa11.17□□□□□ -0.62
PMF1-204ENST00000466489 SP4Q02446 784 aa11.17□□□□□ -0.62
PMF1-204ENST00000466489 LRCH2Q5VUJ6 765 aa11.17□□□□□ -0.62
PMF1-204ENST00000466489 CYP2W1Q8TAV3 490 aa11.17□□□□□ -0.62
PMF1-204ENST00000466489 TNFRSF25Q93038 417 aa11.17□□□□□ -0.62
PMF1-204ENST00000466489 FAM20AQ96MK3 541 aa11.17□□□□□ -0.62
PMF1-204ENST00000466489 CTAGE1Q96RT6 745 aa11.17□□□□□ -0.62
PMF1-204ENST00000466489 RIT2Q99578 217 aa11.17□□□□□ -0.62
PMF1-204ENST00000466489 TEKT3Q9BXF9 490 aa11.17□□□□□ -0.62
PMF1-204ENST00000466489 AZI2Q9H6S1 392 aa11.17□□□□□ -0.62
PMF1-204ENST00000466489 SAMM50Q9Y512 469 aa11.17□□□□□ -0.62
PMF1-204ENST00000466489 A0A0U1RQG5 324 aaPredicted RBP11.16□□□□□ -0.62
PMF1-204ENST00000466489 MYADML2A6NDP7 307 aa11.16□□□□□ -0.62
PMF1-204ENST00000466489 ADAMTS3O15072 1205 aa11.16□□□□□ -0.62
PMF1-204ENST00000466489 SORBS3O60504 671 aa11.16□□□□□ -0.62
PMF1-204ENST00000466489 ARP10275 920 aa11.16□□□□□ -0.62
PMF1-204ENST00000466489 SFNP31947 248 aa11.16□□□□□ -0.62
PMF1-204ENST00000466489 SYKP43405 635 aa11.16□□□□□ -0.62
PMF1-204ENST00000466489 JAK3P52333 1124 aa11.16□□□□□ -0.62
PMF1-204ENST00000466489 RBM10P98175 930 aaKnown RBP11.16□□□□□ -0.62
PMF1-204ENST00000466489 SP2Q02086 613 aa11.16□□□□□ -0.62
PMF1-204ENST00000466489 CALCRLQ16602 461 aa11.16□□□□□ -0.62
PMF1-204ENST00000466489 TTC38Q5R3I4 469 aa11.16□□□□□ -0.62
PMF1-204ENST00000466489 FAM160B1Q5W0V3 765 aa11.16□□□□□ -0.62
PMF1-204ENST00000466489 ZNF746Q6NUN9 644 aaPredicted RBP11.16□□□□□ -0.62
PMF1-204ENST00000466489 MIS18BP1Q6P0N0 1132 aa11.16□□□□□ -0.62
PMF1-204ENST00000466489 CXCL17Q6UXB2 119 aa11.16□□□□□ -0.62
PMF1-204ENST00000466489 FILIP1Q7Z7B0 1213 aa11.16□□□□□ -0.62
PMF1-204ENST00000466489 SEPT1Q8WYJ6 367 aa11.16□□□□□ -0.62
PMF1-204ENST00000466489 FERMT2Q96AC1 680 aa11.16□□□□□ -0.62
PMF1-204ENST00000466489 PCDHA7Q9UN72 937 aa11.16□□□□□ -0.62
PMF1-204ENST00000466489 SCN10AQ9Y5Y9 1956 aa11.16□□□□□ -0.62
PMF1-204ENST00000466489 WDR81Q562E7 1941 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 WDR64B1ANS9 1081 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 DDX39AO00148 427 aaKnown RBP11.15□□□□□ -0.62
PMF1-204ENST00000466489 LAD1O00515 517 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 RIOK3O14730 519 aaKnown RBP11.15□□□□□ -0.62
PMF1-204ENST00000466489 BACH1O14867 736 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 TLR3O15455 904 aaKnown RBP11.15□□□□□ -0.62
PMF1-204ENST00000466489 MSH4O15457 936 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 ATP9AO75110 1047 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 ZNF202O95125 648 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 SLU7O95391 586 aaKnown RBP11.15□□□□□ -0.62
PMF1-204ENST00000466489 PSAPP07602 524 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 COL6A1P12109 1028 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 MCM7P33993 719 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 TCF7P36402 384 aaPredicted RBP11.15□□□□□ -0.62
PMF1-204ENST00000466489 CHMP4BP1P59074 171 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 ACTR2P61160 394 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 PURAQ00577 322 aaKnown RBP11.15□□□□□ -0.62
PMF1-204ENST00000466489 MYL5Q02045 173 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 TMEM266Q2M3C6 531 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 HSDL1Q3SXM5 330 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 ZNF397Q8NF99 534 aaPredicted RBP11.15□□□□□ -0.62
PMF1-204ENST00000466489 RDM1Q8NG50 284 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 DIS3LQ8TF46 1054 aaKnown RBP11.15□□□□□ -0.62
PMF1-204ENST00000466489 GLG1Q92896 1179 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 SLC5A5Q92911 643 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 LENG9Q96B70 501 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 MBOAT7Q96N66 472 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 ZNF830Q96NB3 372 aaPredicted RBP11.15□□□□□ -0.62
PMF1-204ENST00000466489 USP28Q96RU2 1077 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 GPR20Q99678 358 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 NAA15Q9BXJ9 866 aaKnown RBP11.15□□□□□ -0.62
PMF1-204ENST00000466489 RAB34Q9BZG1 259 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 ZMYND15Q9H091 742 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 SMARCAD1Q9H4L7 1026 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 PRKAG2Q9UGJ0 569 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 MYH15Q9Y2K3 1946 aa11.15□□□□□ -0.62
PMF1-204ENST00000466489 FAM205CA6NFA0 338 aa11.14□□□□□ -0.63
PMF1-204ENST00000466489 DCDC2CA8MYV0 355 aa11.14□□□□□ -0.63
PMF1-204ENST00000466489 H3BRB1 525 aa11.14□□□□□ -0.63
PMF1-204ENST00000466489 SLC37A4O43826 429 aa11.14□□□□□ -0.63
PMF1-204ENST00000466489 EVI5O60447 810 aa11.14□□□□□ -0.63
PMF1-204ENST00000466489 DKC1O60832 514 aaKnown RBP eCLIP11.14□□□□□ -0.636e-15■■■■■ 44.9
PMF1-204ENST00000466489 LGALS2P05162 132 aa11.14□□□□□ -0.63
PMF1-204ENST00000466489 ZNF286BP0CG31 522 aa11.14□□□□□ -0.63
PMF1-204ENST00000466489 HOXD8P13378 290 aaPredicted RBP11.14□□□□□ -0.63
PMF1-204ENST00000466489 ERCC5P28715 1186 aaPredicted RBP11.14□□□□□ -0.63
PMF1-204ENST00000466489 SLC26A2P50443 739 aa11.14□□□□□ -0.63
PMF1-204ENST00000466489 ATN1P54259 1190 aaPredicted RBP11.14□□□□□ -0.63
PMF1-204ENST00000466489 MLLT1Q03111 559 aaPredicted RBP11.14□□□□□ -0.63
PMF1-204ENST00000466489 ITGB3BPQ13352 177 aaPredicted RBP11.14□□□□□ -0.63
PMF1-204ENST00000466489 BMS1Q14692 1282 aaKnown RBP11.14□□□□□ -0.63
PMF1-204ENST00000466489 FAM47CQ5HY64 1035 aa11.14□□□□□ -0.63
PMF1-204ENST00000466489 TMEM63BQ5T3F8 832 aa11.14□□□□□ -0.63
PMF1-204ENST00000466489 CCSAPQ6IQ19 270 aaPredicted RBP11.14□□□□□ -0.63
PMF1-204ENST00000466489 NFRKBQ6P4R8 1299 aa11.14□□□□□ -0.63
PMF1-204ENST00000466489 NYAP1Q6ZVC0 841 aa11.14□□□□□ -0.63
PMF1-204ENST00000466489 POTEDQ86YR6 584 aa11.14□□□□□ -0.63
PMF1-204ENST00000466489 CCAR2Q8N163 923 aaKnown RBP11.14□□□□□ -0.63
PMF1-204ENST00000466489 C7orf31Q8N865 590 aa11.14□□□□□ -0.63
PMF1-204ENST00000466489 KRI1Q8N9T8 703 aaKnown RBP11.14□□□□□ -0.63
PMF1-204ENST00000466489 ANKRD20A12PQ8NF67 263 aa11.14□□□□□ -0.63
PMF1-204ENST00000466489 DPF3Q92784 378 aa11.14□□□□□ -0.63
PMF1-204ENST00000466489 CHAMP1Q96JM3 812 aa11.14□□□□□ -0.63
PMF1-204ENST00000466489 KCNF1Q9H3M0 494 aa11.14□□□□□ -0.63
PMF1-204ENST00000466489 TUT1Q9H6E5 874 aaKnown RBP11.14□□□□□ -0.63
PMF1-204ENST00000466489 ERAP1Q9NZ08 941 aa11.14□□□□□ -0.63
PMF1-204ENST00000466489 PCDHA12Q9UN75 941 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms