RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 CCDC155Q8N6L0 562 aa22.86■■□□□ 1.25
SKA3-205ENST00000465471 FAM167AQ96KS9 214 aa22.86■■□□□ 1.25
SKA3-205ENST00000465471 TUBE1Q9UJT0 475 aa22.86■■□□□ 1.25
SKA3-205ENST00000465471 OATP04181 439 aa22.85■■□□□ 1.25
SKA3-205ENST00000465471 NCAPH2Q6IBW4 605 aa22.85■■□□□ 1.25
SKA3-205ENST00000465471 TRAF7Q6Q0C0 670 aa22.85■■□□□ 1.25
SKA3-205ENST00000465471 FERMT3Q86UX7 667 aa22.85■■□□□ 1.25
SKA3-205ENST00000465471 SCN5AQ14524 2016 aa22.84■■□□□ 1.25
SKA3-205ENST00000465471 LAD1O00515 517 aa22.84■■□□□ 1.25
SKA3-205ENST00000465471 HSP90AA1P07900 732 aaKnown RBP22.84■■□□□ 1.25
SKA3-205ENST00000465471 CKBP12277 381 aa22.84■■□□□ 1.25
SKA3-205ENST00000465471 PSMC5P62195 406 aa22.84■■□□□ 1.25
SKA3-205ENST00000465471 FPGSQ05932 587 aa22.84■■□□□ 1.25
SKA3-205ENST00000465471 PTGDRQ13258 359 aa22.84■■□□□ 1.25
SKA3-205ENST00000465471 ZNF484Q5JVG2 852 aa22.84■■□□□ 1.25
SKA3-205ENST00000465471 RPAINQ86UA6 219 aa22.84■■□□□ 1.25
SKA3-205ENST00000465471 TMEM199Q8N511 208 aa22.84■■□□□ 1.25
SKA3-205ENST00000465471 BANK1Q8NDB2 785 aa22.84■■□□□ 1.25
SKA3-205ENST00000465471 TRAPPC12Q8WVT3 735 aa22.84■■□□□ 1.25
SKA3-205ENST00000465471 VWCEQ96DN2 955 aa22.84■■□□□ 1.25
SKA3-205ENST00000465471 MYH15Q9Y2K3 1946 aa22.83■■□□□ 1.25
SKA3-205ENST00000465471 CAND2O75155 1236 aa22.83■■□□□ 1.25
SKA3-205ENST00000465471 P4HBP07237 508 aaKnown RBP22.83■■□□□ 1.25
SKA3-205ENST00000465471 IQCF3P0C7M6 154 aa22.83■■□□□ 1.25
SKA3-205ENST00000465471 CSF2RAP15509 400 aa22.83■■□□□ 1.25
SKA3-205ENST00000465471 SELPP16109 830 aa22.83■■□□□ 1.25
SKA3-205ENST00000465471 PRPHP41219 470 aa22.83■■□□□ 1.25
SKA3-205ENST00000465471 QARSP47897 775 aaKnown RBP22.83■■□□□ 1.25
SKA3-205ENST00000465471 FXR2P51116 673 aaKnown RBP eCLIP22.83■■□□□ 1.25
SKA3-205ENST00000465471 EPHB4P54760 987 aa22.83■■□□□ 1.25
SKA3-205ENST00000465471 CCL23P55773 120 aa22.83■■□□□ 1.25
SKA3-205ENST00000465471 ATP2C1P98194 919 aaPredicted RBP22.83■■□□□ 1.25
SKA3-205ENST00000465471 TAF2Q6P1X5 1199 aa22.83■■□□□ 1.25
SKA3-205ENST00000465471 RUFY4Q6ZNE9 571 aa22.83■■□□□ 1.25
SKA3-205ENST00000465471 CKAP2LQ8IYA6 745 aa22.83■■□□□ 1.25
SKA3-205ENST00000465471 HSD17B14Q9BPX1 270 aa22.83■■□□□ 1.25
SKA3-205ENST00000465471 WRAP73Q9P2S5 460 aaPredicted RBP22.83■■□□□ 1.25
SKA3-205ENST00000465471 COLQQ9Y215 455 aaPredicted RBP22.83■■□□□ 1.25
SKA3-205ENST00000465471 SIP14410 1827 aa22.82■■□□□ 1.24
SKA3-205ENST00000465471 POTEMA6NI47 508 aa22.82■■□□□ 1.24
SKA3-205ENST00000465471 PDIA4P13667 645 aaKnown RBP22.82■■□□□ 1.24
SKA3-205ENST00000465471 IGBP1P78318 339 aa22.82■■□□□ 1.24
SKA3-205ENST00000465471 PPIGQ13427 754 aaKnown RBP eCLIP22.82■■□□□ 1.24
SKA3-205ENST00000465471 TARBP2Q15633 366 aaKnown RBP22.82■■□□□ 1.24
SKA3-205ENST00000465471 XKR3Q5GH77 459 aa22.82■■□□□ 1.24
SKA3-205ENST00000465471 MTHFD1LQ6UB35 978 aa22.82■■□□□ 1.24
SKA3-205ENST00000465471 NEK9Q8TD19 979 aa22.82■■□□□ 1.24
SKA3-205ENST00000465471 SCLYQ96I15 445 aa22.82■■□□□ 1.24
SKA3-205ENST00000465471 CEP89Q96ST8 783 aa22.82■■□□□ 1.24
SKA3-205ENST00000465471 LXNQ9BS40 222 aa22.82■■□□□ 1.24
SKA3-205ENST00000465471 NIFKQ9BYG3 293 aaKnown RBP22.82■■□□□ 1.24
SKA3-205ENST00000465471 UBE2OQ9C0C9 1292 aaKnown RBP22.82■■□□□ 1.24
SKA3-205ENST00000465471 PCDHA2Q9Y5H9 948 aa22.82■■□□□ 1.24
SKA3-205ENST00000465471 C22orf31O95567 290 aa22.81■■□□□ 1.24
SKA3-205ENST00000465471 GPNMBQ14956 572 aa22.81■■□□□ 1.24
SKA3-205ENST00000465471 ZNF618Q5T7W0 954 aa22.81■■□□□ 1.24
SKA3-205ENST00000465471 LRRC8DQ7L1W4 858 aa22.81■■□□□ 1.24
SKA3-205ENST00000465471 C16orf59Q7L2K0 433 aa22.81■■□□□ 1.24
SKA3-205ENST00000465471 C4orf19Q8IY42 314 aa22.81■■□□□ 1.24
SKA3-205ENST00000465471 RETREG2Q8NC44 543 aa22.81■■□□□ 1.24
SKA3-205ENST00000465471 ZBTB10Q96DT7 871 aa22.81■■□□□ 1.24
SKA3-205ENST00000465471 DYDC2Q96IM9 177 aa22.81■■□□□ 1.24
SKA3-205ENST00000465471 EIF2AK1Q9BQI3 630 aaKnown RBP22.81■■□□□ 1.24
SKA3-205ENST00000465471 NRBP2Q9NSY0 501 aa22.81■■□□□ 1.24
SKA3-205ENST00000465471 RGL1Q9NZL6 768 aa22.81■■□□□ 1.24
SKA3-205ENST00000465471 CEP131Q9UPN4 1083 aa22.81■■□□□ 1.24
SKA3-205ENST00000465471 ARID2Q68CP9 1835 aa22.8■■□□□ 1.24
SKA3-205ENST00000465471 A0A1W2PPC1 479 aa22.8■■□□□ 1.24
SKA3-205ENST00000465471 DKC1O60832 514 aaKnown RBP eCLIP22.8■■□□□ 1.24
SKA3-205ENST00000465471 SLITRK3O94933 977 aa22.8■■□□□ 1.24
SKA3-205ENST00000465471 LYPLA2O95372 231 aa22.8■■□□□ 1.24
SKA3-205ENST00000465471 RFC2P35250 354 aa22.8■■□□□ 1.24
SKA3-205ENST00000465471 THPOP40225 353 aa22.8■■□□□ 1.24
SKA3-205ENST00000465471 TECP42680 631 aa22.8■■□□□ 1.24
SKA3-205ENST00000465471 ANO5Q75V66 913 aa22.8■■□□□ 1.24
SKA3-205ENST00000465471 IGSF22Q8N9C0 903 aa22.8■■□□□ 1.24
SKA3-205ENST00000465471 ZSCAN16Q9H4T2 348 aaPredicted RBP22.8■■□□□ 1.24
SKA3-205ENST00000465471 IL23AQ9NPF7 189 aa22.8■■□□□ 1.24
SKA3-205ENST00000465471 SMIM35A0A1B0GVV1 85 aa22.79■■□□□ 1.24
SKA3-205ENST00000465471 PARNO95453 639 aaKnown RBP22.79■■□□□ 1.24
SKA3-205ENST00000465471 RPLP2P05387 115 aaKnown RBP22.79■■□□□ 1.24
SKA3-205ENST00000465471 KLRC1P26715 233 aa22.79■■□□□ 1.24
SKA3-205ENST00000465471 CYP4A11Q02928 519 aa22.79■■□□□ 1.24
SKA3-205ENST00000465471 MBTPS1Q14703 1052 aa22.79■■□□□ 1.24
SKA3-205ENST00000465471 IL17AQ16552 155 aa22.79■■□□□ 1.24
SKA3-205ENST00000465471 TMEM266Q2M3C6 531 aa22.79■■□□□ 1.24
SKA3-205ENST00000465471 FAM26DQ5JW98 314 aa22.79■■□□□ 1.24
SKA3-205ENST00000465471 LINC01465Q8N7H1 131 aa22.79■■□□□ 1.24
SKA3-205ENST00000465471 SPRYD3Q8NCJ5 442 aa22.79■■□□□ 1.24
SKA3-205ENST00000465471 ZSWIM4Q9H7M6 989 aa22.79■■□□□ 1.24
SKA3-205ENST00000465471 TRIOBPQ9H2D6 2365 aa22.79■■□□□ 1.24
SKA3-205ENST00000465471 TET1Q8NFU7 2136 aa22.79■■□□□ 1.24
SKA3-205ENST00000465471 EVPLQ92817 2033 aa22.79■■□□□ 1.24
SKA3-205ENST00000465471 TMEM150BA6NC51 233 aa22.78■■□□□ 1.24
SKA3-205ENST00000465471 SPATA31C1P0DKV0 1188 aa22.78■■□□□ 1.24
SKA3-205ENST00000465471 CTTNQ14247 550 aaKnown RBP22.78■■□□□ 1.24
SKA3-205ENST00000465471 BECN1Q14457 450 aa22.78■■□□□ 1.24
SKA3-205ENST00000465471 PDIA5Q14554 519 aa22.78■■□□□ 1.24
SKA3-205ENST00000465471 ARL6IP4Q66PJ3 421 aaKnown RBP22.78■■□□□ 1.24
SKA3-205ENST00000465471 TRMT1LQ7Z2T5 733 aaKnown RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms