RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 CASC1Q6TDU7 716 aa12.53□□□□□ -0.4
COL11A1-207ENST00000465209 EP400NLQ6ZTU2 488 aa12.53□□□□□ -0.4
COL11A1-207ENST00000465209 HFE2Q6ZVN8 426 aa12.53□□□□□ -0.4
COL11A1-207ENST00000465209 NPAS4Q8IUM7 802 aa12.53□□□□□ -0.4
COL11A1-207ENST00000465209 TMTC2Q8N394 836 aa12.53□□□□□ -0.4
COL11A1-207ENST00000465209 SPPL3Q8TCT6 385 aa12.53□□□□□ -0.4
COL11A1-207ENST00000465209 TRAPPC12Q8WVT3 735 aa12.53□□□□□ -0.4
COL11A1-207ENST00000465209 MXRA8Q9BRK3 442 aa12.53□□□□□ -0.4
COL11A1-207ENST00000465209 FTHL17Q9BXU8 183 aa12.53□□□□□ -0.4
COL11A1-207ENST00000465209 FAM49AQ9H0Q0 323 aaPredicted RBP12.53□□□□□ -0.4
COL11A1-207ENST00000465209 CLEC1BQ9P126 229 aa12.53□□□□□ -0.4
COL11A1-207ENST00000465209 PADI3Q9ULW8 664 aa12.53□□□□□ -0.4
COL11A1-207ENST00000465209 PCDHA2Q9Y5H9 948 aa12.53□□□□□ -0.4
COL11A1-207ENST00000465209 TRPV2Q9Y5S1 764 aa12.53□□□□□ -0.4
COL11A1-207ENST00000465209 MYH9P35579 1960 aaKnown RBP12.52□□□□□ -0.4
COL11A1-207ENST00000465209 CCDC69A6NI79 296 aa12.52□□□□□ -0.41
COL11A1-207ENST00000465209 SPDYE3A6NKU9 549 aa12.52□□□□□ -0.41
COL11A1-207ENST00000465209 MGEA5O60502 916 aa12.52□□□□□ -0.41
COL11A1-207ENST00000465209 CALM1P0DP23 149 aa12.52□□□□□ -0.41
COL11A1-207ENST00000465209 CALM2P0DP24 149 aa12.52□□□□□ -0.41
COL11A1-207ENST00000465209 CALM3P0DP25 149 aa12.52□□□□□ -0.41
COL11A1-207ENST00000465209 GATMP50440 423 aa12.52□□□□□ -0.41
COL11A1-207ENST00000465209 ACTR2P61160 394 aa12.52□□□□□ -0.41
COL11A1-207ENST00000465209 TMEM62Q0P6H9 643 aa12.52□□□□□ -0.41
COL11A1-207ENST00000465209 NAALADL2Q58DX5 795 aa12.52□□□□□ -0.41
COL11A1-207ENST00000465209 PLPPR4Q7Z2D5 763 aa12.52□□□□□ -0.41
COL11A1-207ENST00000465209 FANCBQ8NB91 859 aa12.52□□□□□ -0.41
COL11A1-207ENST00000465209 SMRP1Q8NCR6 262 aa12.52□□□□□ -0.41
COL11A1-207ENST00000465209 FBXL18Q96ME1 805 aa12.52□□□□□ -0.41
COL11A1-207ENST00000465209 LRRC2Q9BYS8 371 aa12.52□□□□□ -0.41
COL11A1-207ENST00000465209 KCNH6Q9H252 994 aa12.52□□□□□ -0.41
COL11A1-207ENST00000465209 MUTYHQ9UIF7 546 aa12.52□□□□□ -0.41
COL11A1-207ENST00000465209 CD207Q9UJ71 328 aa12.52□□□□□ -0.41
COL11A1-207ENST00000465209 SMIM35A0A1B0GVV1 85 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 ZBTB42B2RXF5 422 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 CSPG5O95196 566 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 CCNE2O96020 404 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 ARP10275 920 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 CLK2P49760 499 aaKnown RBP12.51□□□□□ -0.41
COL11A1-207ENST00000465209 NHLH1Q02575 133 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 IER5Q5VY09 327 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 CREB3L3Q68CJ9 461 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 MTHFD1LQ6UB35 978 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 NFXL1Q6ZNB6 911 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 HEATR3Q7Z4Q2 680 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 ALYREFQ86V81 257 aaKnown RBP12.51□□□□□ -0.41
COL11A1-207ENST00000465209 MICU3Q86XE3 530 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 TEX2Q8IWB9 1127 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 CCDC82Q8N4S0 544 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 EFHBQ8N7U6 833 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 KLHL23Q8NBE8 558 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 TMEM40Q8WWA1 233 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 PGBD1Q96JS3 809 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 YTHDC1Q96MU7 727 aaKnown RBP12.51□□□□□ -0.41
COL11A1-207ENST00000465209 POP1Q99575 1024 aaKnown RBP12.51□□□□□ -0.41
COL11A1-207ENST00000465209 CELF4Q9BZC1 486 aaKnown RBP12.51□□□□□ -0.41
COL11A1-207ENST00000465209 AGO4Q9HCK5 861 aaKnown RBP12.51□□□□□ -0.41
COL11A1-207ENST00000465209 ERVK-5Q9HDB9 667 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 RIC8AQ9NPQ8 531 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 TRPC6Q9Y210 931 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 PCDHGC5Q9Y5F6 944 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 SLC12A7Q9Y666 1083 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 CFAP54Q96N23 3096 aa12.51□□□□□ -0.41
COL11A1-207ENST00000465209 MEIS1O00470 390 aa12.5□□□□□ -0.41
COL11A1-207ENST00000465209 SCG2P13521 617 aa12.5□□□□□ -0.41
COL11A1-207ENST00000465209 SREBF1P36956 1147 aa12.5□□□□□ -0.41
COL11A1-207ENST00000465209 COASYQ13057 564 aa12.5□□□□□ -0.41
COL11A1-207ENST00000465209 PAK2Q13177 524 aa12.5□□□□□ -0.41
COL11A1-207ENST00000465209 CBX2Q14781 532 aaPredicted RBP12.5□□□□□ -0.41
COL11A1-207ENST00000465209 CSPP1Q1MSJ5 1256 aa12.5□□□□□ -0.41
COL11A1-207ENST00000465209 PAN2Q504Q3 1202 aaKnown RBP12.5□□□□□ -0.41
COL11A1-207ENST00000465209 CEP55Q53EZ4 464 aa12.5□□□□□ -0.41
COL11A1-207ENST00000465209 PPP1R18Q6NYC8 613 aa12.5□□□□□ -0.41
COL11A1-207ENST00000465209 APOA5Q6Q788 366 aa12.5□□□□□ -0.41
COL11A1-207ENST00000465209 RNF135Q8IUD6 432 aa12.5□□□□□ -0.41
COL11A1-207ENST00000465209 CCDC60Q8IWA6 550 aaPredicted RBP12.5□□□□□ -0.41
COL11A1-207ENST00000465209 POF1BQ8WVV4 589 aa12.5□□□□□ -0.41
COL11A1-207ENST00000465209 CRYGNQ8WXF5 182 aa12.5□□□□□ -0.41
COL11A1-207ENST00000465209 UIMC1Q96RL1 719 aa12.5□□□□□ -0.41
COL11A1-207ENST00000465209 ESYT1Q9BSJ8 1104 aa12.5□□□□□ -0.41
COL11A1-207ENST00000465209 ANO3Q9BYT9 981 aa12.5□□□□□ -0.41
COL11A1-207ENST00000465209 IGFLR1Q9H665 355 aa12.5□□□□□ -0.41
COL11A1-207ENST00000465209 CDHR5Q9HBB8 845 aa12.5□□□□□ -0.41
COL11A1-207ENST00000465209 ZDBF2Q9HCK1 2354 aa12.5□□□□□ -0.41
COL11A1-207ENST00000465209 IGLV3-22A0A075B6J6 115 aa12.49□□□□□ -0.41
COL11A1-207ENST00000465209 LOC730098B7Z3J9 87 aa12.49□□□□□ -0.41
COL11A1-207ENST00000465209 STXBP3O00186 592 aa12.49□□□□□ -0.41
COL11A1-207ENST00000465209 DHX15O43143 795 aaKnown RBP12.49□□□□□ -0.41
COL11A1-207ENST00000465209 ATP4AP20648 1035 aa12.49□□□□□ -0.41
COL11A1-207ENST00000465209 SARSP49591 514 aaKnown RBP12.49□□□□□ -0.41
COL11A1-207ENST00000465209 NDUFV1P49821 464 aa12.49□□□□□ -0.41
COL11A1-207ENST00000465209 SLC26A2P50443 739 aa12.49□□□□□ -0.41
COL11A1-207ENST00000465209 STAT5BP51692 787 aa12.49□□□□□ -0.41
COL11A1-207ENST00000465209 TMEM266Q2M3C6 531 aa12.49□□□□□ -0.41
COL11A1-207ENST00000465209 ABHD15Q6UXT9 468 aa12.49□□□□□ -0.41
COL11A1-207ENST00000465209 NME8Q8N427 588 aa12.49□□□□□ -0.41
COL11A1-207ENST00000465209 VN1R2Q8NFZ6 395 aa12.49□□□□□ -0.41
COL11A1-207ENST00000465209 UPF3BQ9BZI7 483 aaKnown RBP12.49□□□□□ -0.41
COL11A1-207ENST00000465209 AZI2Q9H6S1 392 aa12.49□□□□□ -0.41
COL11A1-207ENST00000465209 FAM217BQ9NTX9 383 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms