RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 ZNF746Q6NUN9 644 aaPredicted RBP13.79□□□□□ -0.2
XRN1-204ENST00000465074 TAF2Q6P1X5 1199 aa13.79□□□□□ -0.2
XRN1-204ENST00000465074 PIK3AP1Q6ZUJ8 805 aa13.79□□□□□ -0.2
XRN1-204ENST00000465074 CCDC83Q8IWF9 413 aa13.79□□□□□ -0.2
XRN1-204ENST00000465074 DAGLBQ8NCG7 672 aa13.79□□□□□ -0.2
XRN1-204ENST00000465074 SLC17A8Q8NDX2 589 aa13.79□□□□□ -0.2
XRN1-204ENST00000465074 OXER1Q8TDS5 423 aa13.79□□□□□ -0.2
XRN1-204ENST00000465074 PPM1EQ8WY54 764 aa13.79□□□□□ -0.2
XRN1-204ENST00000465074 SEPT8Q92599 483 aa13.79□□□□□ -0.2
XRN1-204ENST00000465074 LENG9Q96B70 501 aa13.79□□□□□ -0.2
XRN1-204ENST00000465074 TEKT3Q9BXF9 490 aa13.79□□□□□ -0.2
XRN1-204ENST00000465074 DDX25Q9UHL0 483 aaKnown RBP13.79□□□□□ -0.2
XRN1-204ENST00000465074 LIMCH1Q9UPQ0 1083 aa13.79□□□□□ -0.2
XRN1-204ENST00000465074 PCDHA10Q9Y5I2 948 aa13.79□□□□□ -0.2
XRN1-204ENST00000465074 WDR81Q562E7 1941 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 LOXHD1Q8IVV2 1947 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 WDR64B1ANS9 1081 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 M0QZ92 97 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 EDIL3O43854 480 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 HBP1O60381 514 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 CAND2O75155 1236 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 UPP2O95045 317 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 CHRNA1P02708 482 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 GHRP10912 638 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 FDPSP14324 419 aaKnown RBP13.78□□□□□ -0.2
XRN1-204ENST00000465074 KLRC1P26715 233 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 KRT2P35908 639 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 GUCY1B3Q02153 619 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 NPY5RQ15761 445 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 PLEKHG4Q58EX7 1191 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.78□□□□□ -0.2
XRN1-204ENST00000465074 MYOCDQ8IZQ8 938 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 NSUN7Q8NE18 718 aaKnown RBP13.78□□□□□ -0.2
XRN1-204ENST00000465074 MAFAQ8NHW3 353 aaPredicted RBP13.78□□□□□ -0.2
XRN1-204ENST00000465074 PHOSPHO2Q8TCD6 241 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 IL17RAQ96F46 866 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 GAS2L1Q99501 681 aaPredicted RBP13.78□□□□□ -0.2
XRN1-204ENST00000465074 UNC45AQ9H3U1 944 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 UPF2Q9HAU5 1272 aaKnown RBP13.78□□□□□ -0.2
XRN1-204ENST00000465074 BRMS1Q9HCU9 246 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 DISC1Q9NRI5 854 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 GINS2Q9Y248 185 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 CDY2AQ9Y6F7 541 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 EVPLQ92817 2033 aa13.78□□□□□ -0.2
XRN1-204ENST00000465074 COL6A3P12111 3177 aa13.77□□□□□ -0.2
XRN1-204ENST00000465074 IGKV6D-21A0A0A0MT36 114 aa13.77□□□□□ -0.21
XRN1-204ENST00000465074 M0R2N6 131 aa13.77□□□□□ -0.21
XRN1-204ENST00000465074 CCNT1O60563 726 aaKnown RBP13.77□□□□□ -0.21
XRN1-204ENST00000465074 EFCAB14O75071 495 aa13.77□□□□□ -0.21
XRN1-204ENST00000465074 AMHP03971 560 aa13.77□□□□□ -0.21
XRN1-204ENST00000465074 IBSPP21815 317 aaPredicted RBP13.77□□□□□ -0.21
XRN1-204ENST00000465074 SLC26A2P50443 739 aa13.77□□□□□ -0.21
XRN1-204ENST00000465074 MRPS6P82932 125 aaKnown RBP13.77□□□□□ -0.21
XRN1-204ENST00000465074 NR5A1Q13285 461 aa13.77□□□□□ -0.21
XRN1-204ENST00000465074 IER5Q5VY09 327 aa13.77□□□□□ -0.21
XRN1-204ENST00000465074 MTHFD1LQ6UB35 978 aa13.77□□□□□ -0.21
XRN1-204ENST00000465074 MIER3Q7Z3K6 550 aa13.77□□□□□ -0.21
XRN1-204ENST00000465074 SMAP1Q8IYB5 467 aaPredicted RBP13.77□□□□□ -0.21
XRN1-204ENST00000465074 FAM177A1Q8N128 213 aaPredicted RBP13.77□□□□□ -0.21
XRN1-204ENST00000465074 METTL13Q8N6R0 699 aa13.77□□□□□ -0.21
XRN1-204ENST00000465074 ATP8B4Q8TF62 1192 aa13.77□□□□□ -0.21
XRN1-204ENST00000465074 SLC5A5Q92911 643 aa13.77□□□□□ -0.21
XRN1-204ENST00000465074 PPP1R16BQ96T49 567 aa13.77□□□□□ -0.21
XRN1-204ENST00000465074 IFIH1Q9BYX4 1025 aaKnown RBP13.77□□□□□ -0.21
XRN1-204ENST00000465074 CHD9Q3L8U1 2897 aa13.77□□□□□ -0.21
XRN1-204ENST00000465074 SIP14410 1827 aa13.76□□□□□ -0.21
XRN1-204ENST00000465074 MBLAC1A4D2B0 266 aaPredicted RBP13.76□□□□□ -0.21
XRN1-204ENST00000465074 FAM205CA6NFA0 338 aa13.76□□□□□ -0.21
XRN1-204ENST00000465074 SLC37A4O43826 429 aa13.76□□□□□ -0.21
XRN1-204ENST00000465074 ATP4AP20648 1035 aa13.76□□□□□ -0.21
XRN1-204ENST00000465074 CCDC85BQ15834 202 aaPredicted RBP13.76□□□□□ -0.21
XRN1-204ENST00000465074 Q4G0T1 1027 aa13.76□□□□□ -0.21
XRN1-204ENST00000465074 ZNF484Q5JVG2 852 aa13.76□□□□□ -0.21
XRN1-204ENST00000465074 FAM26DQ5JW98 314 aa13.76□□□□□ -0.21
XRN1-204ENST00000465074 NEK8Q86SG6 692 aa13.76□□□□□ -0.21
XRN1-204ENST00000465074 MICALL1Q8N3F8 863 aa13.76□□□□□ -0.21
XRN1-204ENST00000465074 ARNTL2Q8WYA1 636 aa13.76□□□□□ -0.21
XRN1-204ENST00000465074 RIT2Q99578 217 aa13.76□□□□□ -0.21
XRN1-204ENST00000465074 MTUS1Q9ULD2 1270 aa13.76□□□□□ -0.21
XRN1-204ENST00000465074 PCDHA2Q9Y5H9 948 aa13.76□□□□□ -0.21
XRN1-204ENST00000465074 MYO9BQ13459 2157 aa13.76□□□□□ -0.21
XRN1-204ENST00000465074 MICAL3Q7RTP6 2002 aa13.76□□□□□ -0.21
XRN1-204ENST00000465074 CYP3A7-CYP3A51PA0A087WV96 503 aa13.75□□□□□ -0.21
XRN1-204ENST00000465074 LCHNA4D1U4 455 aa13.75□□□□□ -0.21
XRN1-204ENST00000465074 RFXAPO00287 272 aa13.75□□□□□ -0.21
XRN1-204ENST00000465074 ATP2B1P20020 1258 aa13.75□□□□□ -0.21
XRN1-204ENST00000465074 CYP3A7P24462 503 aa13.75□□□□□ -0.21
XRN1-204ENST00000465074 JAK3P52333 1124 aa13.75□□□□□ -0.21
XRN1-204ENST00000465074 LPIN1Q14693 890 aa13.75□□□□□ -0.21
XRN1-204ENST00000465074 EARS2Q5JPH6 523 aaKnown RBP13.75□□□□□ -0.21
XRN1-204ENST00000465074 BBXQ8WY36 941 aaPredicted RBP13.75□□□□□ -0.21
XRN1-204ENST00000465074 KIF2CQ99661 725 aa13.75□□□□□ -0.21
XRN1-204ENST00000465074 NRBP2Q9NSY0 501 aa13.75□□□□□ -0.21
XRN1-204ENST00000465074 MAFBQ9Y5Q3 323 aaPredicted RBP13.75□□□□□ -0.21
XRN1-204ENST00000465074 TRPV2Q9Y5S1 764 aa13.75□□□□□ -0.21
XRN1-204ENST00000465074 COL1A2P08123 1366 aa13.74□□□□□ -0.21
XRN1-204ENST00000465074 BTBD18B2RXH4 712 aa13.74□□□□□ -0.21
XRN1-204ENST00000465074 PSMD10O75832 226 aa13.74□□□□□ -0.21
XRN1-204ENST00000465074 MMP1P03956 469 aa13.74□□□□□ -0.21
XRN1-204ENST00000465074 CD52P31358 61 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms