RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 PRAMEF25A6NGN4 478 aa6.41□□□□□ -1.38
ITGB1-208ENST00000464001 MUSKO15146 869 aa6.41□□□□□ -1.38
ITGB1-208ENST00000464001 RAC3P60763 192 aa6.41□□□□□ -1.38
ITGB1-208ENST00000464001 RBL2Q08999 1139 aa6.41□□□□□ -1.38
ITGB1-208ENST00000464001 SERINC3Q13530 473 aa6.41□□□□□ -1.38
ITGB1-208ENST00000464001 ZMAT1Q5H9K5 638 aa6.41□□□□□ -1.38
ITGB1-208ENST00000464001 PALM2Q8IXS6 379 aa6.41□□□□□ -1.38
ITGB1-208ENST00000464001 WDR48Q8TAF3 677 aa6.41□□□□□ -1.38
ITGB1-208ENST00000464001 NEIL1Q96FI4 390 aaPredicted RBP6.41□□□□□ -1.38
ITGB1-208ENST00000464001 DEPDC7Q96QD5 511 aa6.41□□□□□ -1.38
ITGB1-208ENST00000464001 SRRDQ9UH36 339 aa6.41□□□□□ -1.38
ITGB1-208ENST00000464001 FBXO10Q9UK96 956 aa6.41□□□□□ -1.38
ITGB1-208ENST00000464001 TESMINQ9Y4I5 508 aa6.41□□□□□ -1.38
ITGB1-208ENST00000464001 FSHBP01225 129 aa6.4□□□□□ -1.38
ITGB1-208ENST00000464001 C4BPAP04003 597 aaKnown RBP6.4□□□□□ -1.38
ITGB1-208ENST00000464001 AOAHP28039 575 aa6.4□□□□□ -1.38
ITGB1-208ENST00000464001 RASA3Q14644 834 aa6.4□□□□□ -1.38
ITGB1-208ENST00000464001 SOGA3Q5TF21 947 aa6.4□□□□□ -1.38
ITGB1-208ENST00000464001 TCTN3Q6NUS6 607 aa6.4□□□□□ -1.38
ITGB1-208ENST00000464001 TAX1BP1Q86VP1 789 aa6.4□□□□□ -1.38
ITGB1-208ENST00000464001 MAGEB10Q96LZ2 347 aaPredicted RBP6.4□□□□□ -1.38
ITGB1-208ENST00000464001 WWC2-AS2Q96NR7 200 aa6.4□□□□□ -1.38
ITGB1-208ENST00000464001 SMURF1Q9HCE7 757 aa6.4□□□□□ -1.38
ITGB1-208ENST00000464001 NDOR1Q9UHB4 597 aa6.4□□□□□ -1.38
ITGB1-208ENST00000464001 PTPN22Q9Y2R2 807 aa6.4□□□□□ -1.38
ITGB1-208ENST00000464001 CCDC163A0A0D9SF12 145 aa6.39□□□□□ -1.39
ITGB1-208ENST00000464001 FOXS1O43638 330 aa6.39□□□□□ -1.39
ITGB1-208ENST00000464001 AKAP8O43823 692 aaKnown RBP6.39□□□□□ -1.39
ITGB1-208ENST00000464001 C6P13671 934 aa6.39□□□□□ -1.39
ITGB1-208ENST00000464001 ETV4P43268 484 aa6.39□□□□□ -1.39
ITGB1-208ENST00000464001 R3HDM1Q15032 1099 aaKnown RBP6.39□□□□□ -1.39
ITGB1-208ENST00000464001 WNK4Q96J92 1243 aa6.39□□□□□ -1.39
ITGB1-208ENST00000464001 BTBD2Q9BX70 525 aa6.39□□□□□ -1.39
ITGB1-208ENST00000464001 SLC52A2Q9HAB3 445 aa6.39□□□□□ -1.39
ITGB1-208ENST00000464001 SNTG2Q9NY99 539 aa6.39□□□□□ -1.39
ITGB1-208ENST00000464001 ZFR2Q9UPR6 939 aaKnown RBP6.39□□□□□ -1.39
ITGB1-208ENST00000464001 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.38□□□□□ -1.39
ITGB1-208ENST00000464001 FAM221BA6H8Z2 402 aa6.38□□□□□ -1.39
ITGB1-208ENST00000464001 KCNK3O14649 394 aa6.38□□□□□ -1.39
ITGB1-208ENST00000464001 TACR2P21452 398 aa6.38□□□□□ -1.39
ITGB1-208ENST00000464001 GDF5P43026 501 aa6.38□□□□□ -1.39
ITGB1-208ENST00000464001 IL13RA1P78552 427 aa6.38□□□□□ -1.39
ITGB1-208ENST00000464001 SLC16A11Q8NCK7 471 aa6.38□□□□□ -1.39
ITGB1-208ENST00000464001 MKL1Q969V6 931 aa6.38□□□□□ -1.39
ITGB1-208ENST00000464001 SRPK1Q96SB4 655 aaKnown RBP6.38□□□□□ -1.39
ITGB1-208ENST00000464001 ZDHHC5Q9C0B5 715 aa6.38□□□□□ -1.39
ITGB1-208ENST00000464001 VPS11Q9H270 941 aa6.38□□□□□ -1.39
ITGB1-208ENST00000464001 BTBD7Q9P203 1132 aa6.38□□□□□ -1.39
ITGB1-208ENST00000464001 ECE1P42892 770 aa6.37□□□□□ -1.39
ITGB1-208ENST00000464001 RRADP55042 308 aa6.37□□□□□ -1.39
ITGB1-208ENST00000464001 PRKD1Q15139 912 aaPredicted RBP6.37□□□□□ -1.39
ITGB1-208ENST00000464001 STILQ15468 1287 aa6.37□□□□□ -1.39
ITGB1-208ENST00000464001 CISD2Q8N5K1 135 aaKnown RBP6.37□□□□□ -1.39
ITGB1-208ENST00000464001 GSTCDQ8NEC7 633 aa6.37□□□□□ -1.39
ITGB1-208ENST00000464001 ZSWIM2Q8NEG5 633 aa6.37□□□□□ -1.39
ITGB1-208ENST00000464001 DNAJC7Q99615 494 aa6.37□□□□□ -1.39
ITGB1-208ENST00000464001 CELF4Q9BZC1 486 aaKnown RBP6.37□□□□□ -1.39
ITGB1-208ENST00000464001 KCNH7Q9NS40 1196 aa6.37□□□□□ -1.39
ITGB1-208ENST00000464001 NR2E1Q9Y466 385 aa6.37□□□□□ -1.39
ITGB1-208ENST00000464001 SCDO00767 359 aa6.36□□□□□ -1.39
ITGB1-208ENST00000464001 AMHP03971 560 aa6.36□□□□□ -1.39
ITGB1-208ENST00000464001 HMGCRP04035 888 aa6.36□□□□□ -1.39
ITGB1-208ENST00000464001 CR2P20023 1033 aa6.36□□□□□ -1.39
ITGB1-208ENST00000464001 MC4RP32245 332 aa6.36□□□□□ -1.39
ITGB1-208ENST00000464001 KCNQ1P51787 676 aa6.36□□□□□ -1.39
ITGB1-208ENST00000464001 RNF151Q2KHN1 245 aa6.36□□□□□ -1.39
ITGB1-208ENST00000464001 TRIM61Q5EBN2 209 aa6.36□□□□□ -1.39
ITGB1-208ENST00000464001 SPDYAQ5MJ70 313 aa6.36□□□□□ -1.39
ITGB1-208ENST00000464001 CRIP3Q6Q6R5 217 aa6.36□□□□□ -1.39
ITGB1-208ENST00000464001 USP51Q70EK9 711 aa6.36□□□□□ -1.39
ITGB1-208ENST00000464001 SLC7A14Q8TBB6 771 aa6.36□□□□□ -1.39
ITGB1-208ENST00000464001 ZNF747Q9BV97 191 aa6.36□□□□□ -1.39
ITGB1-208ENST00000464001 SFMBT1Q9UHJ3 866 aa6.36□□□□□ -1.39
ITGB1-208ENST00000464001 OAZ3Q9UMX2 235 aa6.36□□□□□ -1.39
ITGB1-208ENST00000464001 ARHGAP6O43182 974 aa6.35□□□□□ -1.39
ITGB1-208ENST00000464001 FZD7O75084 574 aa6.35□□□□□ -1.39
ITGB1-208ENST00000464001 RASGRP1O95267 797 aa6.35□□□□□ -1.39
ITGB1-208ENST00000464001 NPTXRO95502 500 aa6.35□□□□□ -1.39
ITGB1-208ENST00000464001 MMEP08473 750 aa6.35□□□□□ -1.39
ITGB1-208ENST00000464001 COMTP21964 271 aa6.35□□□□□ -1.39
ITGB1-208ENST00000464001 ADCY8P40145 1251 aa6.35□□□□□ -1.39
ITGB1-208ENST00000464001 EIF4HQ15056 248 aaKnown RBP6.35□□□□□ -1.39
ITGB1-208ENST00000464001 OTOP2Q7RTS6 562 aa6.35□□□□□ -1.39
ITGB1-208ENST00000464001 NOSTRINQ8IVI9 506 aa6.35□□□□□ -1.39
ITGB1-208ENST00000464001 FUKQ8N0W3 1084 aa6.35□□□□□ -1.39
ITGB1-208ENST00000464001 THAP3Q8WTV1 239 aaPredicted RBP6.35□□□□□ -1.39
ITGB1-208ENST00000464001 ADOQ96SZ5 270 aa6.35□□□□□ -1.39
ITGB1-208ENST00000464001 AMNQ9BXJ7 453 aa6.35□□□□□ -1.39
ITGB1-208ENST00000464001 MRPL4Q9BYD3 311 aaKnown RBP6.35□□□□□ -1.39
ITGB1-208ENST00000464001 C12orf65Q9H3J6 166 aaKnown RBP6.35□□□□□ -1.39
ITGB1-208ENST00000464001 MSL2Q9HCI7 577 aa6.35□□□□□ -1.39
ITGB1-208ENST00000464001 UCKL1Q9NWZ5 548 aa6.35□□□□□ -1.39
ITGB1-208ENST00000464001 COQ6Q9Y2Z9 468 aa6.35□□□□□ -1.39
ITGB1-208ENST00000464001 A0A0G2JNJ9 132 aa6.34□□□□□ -1.39
ITGB1-208ENST00000464001 SLC12A8A0AV02 714 aa6.34□□□□□ -1.39
ITGB1-208ENST00000464001 FOXP2O15409 715 aa6.34□□□□□ -1.39
ITGB1-208ENST00000464001 CDC14BO60729 498 aa6.34□□□□□ -1.39
ITGB1-208ENST00000464001 RAD17O75943 681 aa6.34□□□□□ -1.39
ITGB1-208ENST00000464001 MPIG6BO95866 241 aa6.34□□□□□ -1.39
ITGB1-208ENST00000464001 CD83Q01151 205 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms