RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 FAM184BQ9ULE4 1060 aa11.02□□□□□ -0.64
PTPRD-207ENST00000463477 A0A1W2PQC6 194 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 CCDC175P0C221 793 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 AKR1A1P14550 325 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 PRCPP42785 496 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 FXR2P51116 673 aaKnown RBP eCLIP11.01□□□□□ -0.65
PTPRD-207ENST00000463477 AMPD3Q01432 767 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 NECAB2Q7Z6G3 386 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 CABP7Q86V35 215 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 UBE2Q2Q8WVN8 375 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 STAMQ92783 540 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 PAWRQ96IZ0 340 aaKnown RBP11.01□□□□□ -0.65
PTPRD-207ENST00000463477 PURBQ96QR8 312 aaKnown RBP11.01□□□□□ -0.65
PTPRD-207ENST00000463477 KATNBL1Q9H079 304 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 PLXNA1Q9UIW2 1896 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 B4DLN1 442 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 KCNJ18B7U540 433 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 PSMA7O14818 248 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 OPLAHO14841 1288 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 SLC26A4O43511 780 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 RARBP10826 455 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 ALDH5A1P51649 535 aaPredicted RBP11.01□□□□□ -0.65
PTPRD-207ENST00000463477 MRPL12P52815 198 aaKnown RBP11.01□□□□□ -0.65
PTPRD-207ENST00000463477 RBL2Q08999 1139 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 KCNJ12Q14500 433 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 KMT5BQ4FZB7 885 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 CNNM4Q6P4Q7 775 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 FOXR2Q6PJQ5 311 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 SLC30A10Q6XR72 485 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 ARRDC4Q8NCT1 418 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 SYTL5Q8TDW5 730 aaPredicted RBP11.01□□□□□ -0.65
PTPRD-207ENST00000463477 MTMR9Q96QG7 549 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 GLT8D2Q9H1C3 349 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 STK17AQ9UEE5 414 aa11.01□□□□□ -0.65
PTPRD-207ENST00000463477 TNRC18O15417 2968 aaPredicted RBP11□□□□□ -0.65
PTPRD-207ENST00000463477 BICDL2A1A5D9 508 aa11□□□□□ -0.65
PTPRD-207ENST00000463477 N4BP3O15049 544 aa11□□□□□ -0.65
PTPRD-207ENST00000463477 CCNT1O60563 726 aaKnown RBP11□□□□□ -0.65
PTPRD-207ENST00000463477 GYPCP04921 128 aa11□□□□□ -0.65
PTPRD-207ENST00000463477 COL6A1P12109 1028 aa11□□□□□ -0.65
PTPRD-207ENST00000463477 PLCG1P19174 1290 aa11□□□□□ -0.65
PTPRD-207ENST00000463477 EDNRBP24530 442 aa11□□□□□ -0.65
PTPRD-207ENST00000463477 HSD17B4P51659 736 aa11□□□□□ -0.65
PTPRD-207ENST00000463477 ADCY7P51828 1080 aa11□□□□□ -0.65
PTPRD-207ENST00000463477 GOLGA8FQ08AF8 430 aa11□□□□□ -0.65
PTPRD-207ENST00000463477 GOLGA8DPQ0D2H9 430 aa11□□□□□ -0.65
PTPRD-207ENST00000463477 PDIA5Q14554 519 aa11□□□□□ -0.65
PTPRD-207ENST00000463477 IRF2BP1Q8IU81 584 aa11□□□□□ -0.65
PTPRD-207ENST00000463477 TMTC1Q8IUR5 882 aa11□□□□□ -0.65
PTPRD-207ENST00000463477 TBCKQ8TEA7 893 aa11□□□□□ -0.65
PTPRD-207ENST00000463477 MPHOSPH6Q99547 160 aaKnown RBP11□□□□□ -0.65
PTPRD-207ENST00000463477 NAP1L4Q99733 375 aaKnown RBP11□□□□□ -0.65
PTPRD-207ENST00000463477 HTATIP2Q9BUP3 242 aa11□□□□□ -0.65
PTPRD-207ENST00000463477 RAB34Q9BZG1 259 aa11□□□□□ -0.65
PTPRD-207ENST00000463477 TRIM9Q9C026 710 aa11□□□□□ -0.65
PTPRD-207ENST00000463477 RIC8AQ9NPQ8 531 aa11□□□□□ -0.65
PTPRD-207ENST00000463477 ZHX1Q9UKY1 873 aaPredicted RBP11□□□□□ -0.65
PTPRD-207ENST00000463477 GDAQ9Y2T3 454 aa11□□□□□ -0.65
PTPRD-207ENST00000463477 LGALS16A8MUM7 142 aa10.99□□□□□ -0.65
PTPRD-207ENST00000463477 DNM1LO00429 736 aa10.99□□□□□ -0.65
PTPRD-207ENST00000463477 DUSP11O75319 330 aaKnown RBP10.99□□□□□ -0.65
PTPRD-207ENST00000463477 CFBP00751 764 aa10.99□□□□□ -0.65
PTPRD-207ENST00000463477 CCNE1P24864 410 aa10.99□□□□□ -0.65
PTPRD-207ENST00000463477 CDC25AP30304 524 aa10.99□□□□□ -0.65
PTPRD-207ENST00000463477 CLK2P49760 499 aaKnown RBP10.99□□□□□ -0.65
PTPRD-207ENST00000463477 TUBB2AQ13885 445 aa10.99□□□□□ -0.65
PTPRD-207ENST00000463477 LETM2Q2VYF4 491 aa10.99□□□□□ -0.65
PTPRD-207ENST00000463477 IQSEC1Q6DN90 963 aa10.99□□□□□ -0.65
PTPRD-207ENST00000463477 PPP4R3AQ6IN85 833 aa10.99□□□□□ -0.65
PTPRD-207ENST00000463477 TTI2Q6NXR4 508 aa10.99□□□□□ -0.65
PTPRD-207ENST00000463477 TAPT1Q6NXT6 567 aa10.99□□□□□ -0.65
PTPRD-207ENST00000463477 TOGARAM2Q6ZUX3 1019 aa10.99□□□□□ -0.65
PTPRD-207ENST00000463477 RASSF8Q8NHQ8 419 aa10.99□□□□□ -0.65
PTPRD-207ENST00000463477 NSUN6Q8TEA1 469 aaKnown RBP10.99□□□□□ -0.65
PTPRD-207ENST00000463477 DIS3LQ8TF46 1054 aaKnown RBP10.99□□□□□ -0.65
PTPRD-207ENST00000463477 IQCDQ96DY2 449 aa10.99□□□□□ -0.65
PTPRD-207ENST00000463477 CALML4Q96GE6 196 aa10.99□□□□□ -0.65
PTPRD-207ENST00000463477 TAAR1Q96RJ0 339 aa10.99□□□□□ -0.65
PTPRD-207ENST00000463477 IWS1Q96ST2 819 aa10.99□□□□□ -0.65
PTPRD-207ENST00000463477 TUBB2BQ9BVA1 445 aa10.99□□□□□ -0.65
PTPRD-207ENST00000463477 VTA1Q9NP79 307 aa10.99□□□□□ -0.65
PTPRD-207ENST00000463477 ADGRG1Q9Y653 693 aa10.99□□□□□ -0.65
PTPRD-207ENST00000463477 PVALEFA0A1B0GWK0 134 aa10.98□□□□□ -0.65
PTPRD-207ENST00000463477 PP2D1A8MPX8 630 aa10.98□□□□□ -0.65
PTPRD-207ENST00000463477 EFCAB8A8MWE9 144 aa10.98□□□□□ -0.65
PTPRD-207ENST00000463477 H2AFXP16104 143 aaPredicted RBP10.98□□□□□ -0.65
PTPRD-207ENST00000463477 GCFC2P16383 781 aaKnown RBP10.98□□□□□ -0.65
PTPRD-207ENST00000463477 CASQ1P31415 396 aa10.98□□□□□ -0.65
PTPRD-207ENST00000463477 CASP14P31944 242 aa10.98□□□□□ -0.65
PTPRD-207ENST00000463477 NKX3-2P78367 333 aa10.98□□□□□ -0.65
PTPRD-207ENST00000463477 PTPN21Q16825 1174 aa10.98□□□□□ -0.65
PTPRD-207ENST00000463477 TMEM266Q2M3C6 531 aa10.98□□□□□ -0.65
PTPRD-207ENST00000463477 FAM114A1Q8IWE2 563 aa10.98□□□□□ -0.65
PTPRD-207ENST00000463477 ZNF507Q8TCN5 953 aa10.98□□□□□ -0.65
PTPRD-207ENST00000463477 RMDN3Q96TC7 470 aa10.98□□□□□ -0.65
PTPRD-207ENST00000463477 MMTAG2Q9BU76 263 aaKnown RBP10.98□□□□□ -0.65
PTPRD-207ENST00000463477 LRRC27Q9C0I9 530 aa10.98□□□□□ -0.65
PTPRD-207ENST00000463477 C11orf49Q9H6J7 331 aa10.98□□□□□ -0.65
PTPRD-207ENST00000463477 XPNPEP3Q9NQH7 507 aa10.98□□□□□ -0.65
PTPRD-207ENST00000463477 OGFRQ9NZT2 677 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms