RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 SMAP1Q8IYB5 467 aaPredicted RBP13.52□□□□□ -0.25
RTCB-202ENST00000463455 USP38Q8NB14 1042 aa13.52□□□□□ -0.25
RTCB-202ENST00000463455 SP7Q8TDD2 431 aaPredicted RBP13.52□□□□□ -0.25
RTCB-202ENST00000463455 ATXN2LQ8WWM7 1075 aaKnown RBP13.52□□□□□ -0.25
RTCB-202ENST00000463455 SYMPKQ92797 1274 aaKnown RBP13.52□□□□□ -0.25
RTCB-202ENST00000463455 SLC26A6Q9BXS9 759 aa13.52□□□□□ -0.25
RTCB-202ENST00000463455 IFIH1Q9BYX4 1025 aaKnown RBP13.52□□□□□ -0.25
RTCB-202ENST00000463455 LMCD1Q9NZU5 365 aa13.52□□□□□ -0.25
RTCB-202ENST00000463455 TCEAL9Q9UHQ7 104 aa13.52□□□□□ -0.25
RTCB-202ENST00000463455 COL1A2P08123 1366 aa13.52□□□□□ -0.25
RTCB-202ENST00000463455 TTC28Q96AY4 2481 aa13.52□□□□□ -0.25
RTCB-202ENST00000463455 DHX15O43143 795 aaKnown RBP13.51□□□□□ -0.25
RTCB-202ENST00000463455 HBP1O60381 514 aa13.51□□□□□ -0.25
RTCB-202ENST00000463455 CDKL5O76039 1030 aa13.51□□□□□ -0.25
RTCB-202ENST00000463455 CTSHP09668 335 aa13.51□□□□□ -0.25
RTCB-202ENST00000463455 INSRRP14616 1297 aa13.51□□□□□ -0.25
RTCB-202ENST00000463455 IGFBP4P22692 258 aa13.51□□□□□ -0.25
RTCB-202ENST00000463455 USP11P51784 963 aa13.51□□□□□ -0.25
RTCB-202ENST00000463455 ERVK-21P61565 698 aa13.51□□□□□ -0.25
RTCB-202ENST00000463455 CCT2P78371 535 aaKnown RBP13.51□□□□□ -0.25
RTCB-202ENST00000463455 HTRA4P83105 476 aaPredicted RBP13.51□□□□□ -0.25
RTCB-202ENST00000463455 KRT76Q01546 638 aa13.51□□□□□ -0.25
RTCB-202ENST00000463455 SSRP1Q08945 709 aaKnown RBP13.51□□□□□ -0.25
RTCB-202ENST00000463455 MGAT3Q09327 533 aa13.51□□□□□ -0.25
RTCB-202ENST00000463455 PLCB4Q15147 1175 aa13.51□□□□□ -0.25
RTCB-202ENST00000463455 TCTN1Q2MV58 587 aa13.51□□□□□ -0.25
RTCB-202ENST00000463455 ABHD15Q6UXT9 468 aa13.51□□□□□ -0.25
RTCB-202ENST00000463455 NME8Q8N427 588 aa13.51□□□□□ -0.25
RTCB-202ENST00000463455 PDCD7Q8N8D1 485 aaKnown RBP13.51□□□□□ -0.25
RTCB-202ENST00000463455 IL17RAQ96F46 866 aa13.51□□□□□ -0.25
RTCB-202ENST00000463455 SAMD11Q96NU1 681 aa13.51□□□□□ -0.25
RTCB-202ENST00000463455 PDRG1Q9NUG6 133 aa13.51□□□□□ -0.25
RTCB-202ENST00000463455 PCDHA2Q9Y5H9 948 aa13.51□□□□□ -0.25
RTCB-202ENST00000463455 TRANK1O15050 2925 aa13.5□□□□□ -0.25
RTCB-202ENST00000463455 KDM3AQ9Y4C1 1321 aa13.5□□□□□ -0.25
RTCB-202ENST00000463455 SMIM35A0A1B0GVV1 85 aa13.5□□□□□ -0.25
RTCB-202ENST00000463455 POTEB3A0JP26 581 aa13.5□□□□□ -0.25
RTCB-202ENST00000463455 CHRNA1P02708 482 aa13.5□□□□□ -0.25
RTCB-202ENST00000463455 ANKRD1Q15327 319 aa13.5□□□□□ -0.25
RTCB-202ENST00000463455 IER5Q5VY09 327 aa13.5□□□□□ -0.25
RTCB-202ENST00000463455 MIS18BP1Q6P0N0 1132 aa13.5□□□□□ -0.25
RTCB-202ENST00000463455 POTEBQ6S5H4 581 aa13.5□□□□□ -0.25
RTCB-202ENST00000463455 RUFY4Q6ZNE9 571 aa13.5□□□□□ -0.25
RTCB-202ENST00000463455 TSHZ1Q6ZSZ6 1077 aa13.5□□□□□ -0.25
RTCB-202ENST00000463455 MYOCDQ8IZQ8 938 aa13.5□□□□□ -0.25
RTCB-202ENST00000463455 DAGLBQ8NCG7 672 aa13.5□□□□□ -0.25
RTCB-202ENST00000463455 ATP8B4Q8TF62 1192 aa13.5□□□□□ -0.25
RTCB-202ENST00000463455 TOP1MTQ969P6 601 aa13.5□□□□□ -0.25
RTCB-202ENST00000463455 TGS1Q96RS0 853 aaKnown RBP13.5□□□□□ -0.25
RTCB-202ENST00000463455 ZNF577Q9BSK1 485 aa13.5□□□□□ -0.25
RTCB-202ENST00000463455 NCOA5Q9HCD5 579 aaKnown RBP13.5□□□□□ -0.25
RTCB-202ENST00000463455 VPS54Q9P1Q0 977 aa13.5□□□□□ -0.25
RTCB-202ENST00000463455 THEGQ9P2T0 379 aa13.5□□□□□ -0.25
RTCB-202ENST00000463455 PRRC2BQ5JSZ5 2229 aaKnown RBP13.49□□□□□ -0.25
RTCB-202ENST00000463455 LINC01553A4QN01 128 aa13.49□□□□□ -0.25
RTCB-202ENST00000463455 M0QZ92 97 aa13.49□□□□□ -0.25
RTCB-202ENST00000463455 BACH1O14867 736 aa13.49□□□□□ -0.25
RTCB-202ENST00000463455 CCNE2O96020 404 aa13.49□□□□□ -0.25
RTCB-202ENST00000463455 NLRP5P59047 1200 aa13.49□□□□□ -0.25
RTCB-202ENST00000463455 MRPS6P82932 125 aaKnown RBP13.49□□□□□ -0.25
RTCB-202ENST00000463455 TJAP1Q5JTD0 557 aa13.49□□□□□ -0.25
RTCB-202ENST00000463455 FBXO47Q5MNV8 452 aa13.49□□□□□ -0.25
RTCB-202ENST00000463455 MOXD1Q6UVY6 613 aa13.49□□□□□ -0.25
RTCB-202ENST00000463455 DNAJB3Q8WWF6 145 aa13.49□□□□□ -0.25
RTCB-202ENST00000463455 ARNTL2Q8WYA1 636 aa13.49□□□□□ -0.25
RTCB-202ENST00000463455 COL25A1Q9BXS0 654 aaPredicted RBP13.49□□□□□ -0.25
RTCB-202ENST00000463455 FTHL17Q9BXU8 183 aa13.49□□□□□ -0.25
RTCB-202ENST00000463455 UPF3BQ9BZI7 483 aaKnown RBP13.49□□□□□ -0.25
RTCB-202ENST00000463455 ZNF302Q9NR11 478 aa13.49□□□□□ -0.25
RTCB-202ENST00000463455 PCDHA4Q9UN74 947 aa13.49□□□□□ -0.25
RTCB-202ENST00000463455 MTCH2Q9Y6C9 303 aa13.49□□□□□ -0.25
RTCB-202ENST00000463455 EYSQ5T1H1 3165 aa13.49□□□□□ -0.25
RTCB-202ENST00000463455 PRUNE2Q8WUY3 3088 aa13.48□□□□□ -0.25
RTCB-202ENST00000463455 SIP14410 1827 aa13.48□□□□□ -0.25
RTCB-202ENST00000463455 STK36Q9NRP7 1315 aa13.48□□□□□ -0.25
RTCB-202ENST00000463455 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.48□□□□□ -0.25
RTCB-202ENST00000463455 LCHNA4D1U4 455 aa13.48□□□□□ -0.25
RTCB-202ENST00000463455 ARHGEF15O94989 841 aa13.48□□□□□ -0.25
RTCB-202ENST00000463455 CENPBP07199 599 aaPredicted RBP13.48□□□□□ -0.25
RTCB-202ENST00000463455 PSAPP07602 524 aa13.48□□□□□ -0.25
RTCB-202ENST00000463455 LPIN1Q14693 890 aa13.48□□□□□ -0.25
RTCB-202ENST00000463455 PRR16Q569H4 304 aa13.48□□□□□ -0.25
RTCB-202ENST00000463455 ZNF484Q5JVG2 852 aa13.48□□□□□ -0.25
RTCB-202ENST00000463455 PDXDC2PQ6P474 469 aa13.48□□□□□ -0.25
RTCB-202ENST00000463455 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.48□□□□□ -0.25
RTCB-202ENST00000463455 CCDC60Q8IWA6 550 aaPredicted RBP13.48□□□□□ -0.25
RTCB-202ENST00000463455 ZNF710Q8N1W2 664 aa13.48□□□□□ -0.25
RTCB-202ENST00000463455 LENG9Q96B70 501 aa13.48□□□□□ -0.25
RTCB-202ENST00000463455 FAM167AQ96KS9 214 aa13.48□□□□□ -0.25
RTCB-202ENST00000463455 RIT2Q99578 217 aa13.48□□□□□ -0.25
RTCB-202ENST00000463455 PCDHA10Q9Y5I2 948 aa13.48□□□□□ -0.25
RTCB-202ENST00000463455 MAFBQ9Y5Q3 323 aaPredicted RBP13.48□□□□□ -0.25
RTCB-202ENST00000463455 TRPV2Q9Y5S1 764 aa13.48□□□□□ -0.25
RTCB-202ENST00000463455 CDY2AQ9Y6F7 541 aa13.48□□□□□ -0.25
RTCB-202ENST00000463455 NCOR1O75376 2440 aa13.48□□□□□ -0.25
RTCB-202ENST00000463455 MYH9P35579 1960 aaKnown RBP13.47□□□□□ -0.25
RTCB-202ENST00000463455 IGSF9BQ9UPX0 1349 aa13.47□□□□□ -0.25
RTCB-202ENST00000463455 CYP3A7-CYP3A51PA0A087WV96 503 aa13.47□□□□□ -0.25
RTCB-202ENST00000463455 EPOPA6NHQ4 379 aa13.47□□□□□ -0.25
RTCB-202ENST00000463455 WDR64B1ANS9 1081 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms