RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 LARP4BQ92615 738 aaKnown RBP16.04■□□□□ 0.16
COL6A1-202ENST00000463060 ATP6V0A1Q93050 837 aa16.04■□□□□ 0.16
COL6A1-202ENST00000463060 PAGE5Q96GU1 130 aa16.04■□□□□ 0.16
COL6A1-202ENST00000463060 CDK5RAP3Q96JB5 506 aa16.04■□□□□ 0.16
COL6A1-202ENST00000463060 MAGEF1Q9HAY2 307 aa16.04■□□□□ 0.16
COL6A1-202ENST00000463060 ZNF302Q9NR11 478 aa16.04■□□□□ 0.16
COL6A1-202ENST00000463060 ANKEF1Q9NU02 776 aa16.04■□□□□ 0.16
COL6A1-202ENST00000463060 DBR1Q9UK59 544 aaKnown RBP16.04■□□□□ 0.16
COL6A1-202ENST00000463060 SYNRGQ9UMZ2 1314 aa16.03■□□□□ 0.16
COL6A1-202ENST00000463060 BACH1O14867 736 aa16.03■□□□□ 0.16
COL6A1-202ENST00000463060 DKC1O60832 514 aaKnown RBP eCLIP16.03■□□□□ 0.16
COL6A1-202ENST00000463060 LGALS2P05162 132 aa16.03■□□□□ 0.16
COL6A1-202ENST00000463060 CNGA1P29973 690 aa16.03■□□□□ 0.16
COL6A1-202ENST00000463060 PKN2Q16513 984 aaKnown RBP16.03■□□□□ 0.16
COL6A1-202ENST00000463060 ARSHQ5FYA8 562 aa16.03■□□□□ 0.16
COL6A1-202ENST00000463060 CCSAPQ6IQ19 270 aaPredicted RBP16.03■□□□□ 0.16
COL6A1-202ENST00000463060 CAVIN1Q6NZI2 390 aaKnown RBP16.03■□□□□ 0.16
COL6A1-202ENST00000463060 CNNM4Q6P4Q7 775 aa16.03■□□□□ 0.16
COL6A1-202ENST00000463060 FBXO46Q6PJ61 603 aaPredicted RBP16.03■□□□□ 0.16
COL6A1-202ENST00000463060 KLHDC9Q8NEP7 349 aa16.03■□□□□ 0.16
COL6A1-202ENST00000463060 SPATA20Q8TB22 786 aa16.03■□□□□ 0.16
COL6A1-202ENST00000463060 CEP89Q96ST8 783 aa16.03■□□□□ 0.16
COL6A1-202ENST00000463060 AP5M1Q9H0R1 490 aa16.03■□□□□ 0.16
COL6A1-202ENST00000463060 SMARCAD1Q9H4L7 1026 aa16.03■□□□□ 0.16
COL6A1-202ENST00000463060 HMX1Q9NP08 348 aaPredicted RBP16.03■□□□□ 0.16
COL6A1-202ENST00000463060 DDX20Q9UHI6 824 aaKnown RBP16.03■□□□□ 0.16
COL6A1-202ENST00000463060 MYH9P35579 1960 aaKnown RBP16.03■□□□□ 0.16
COL6A1-202ENST00000463060 PLA2G4BP0C869 781 aa16.02■□□□□ 0.16
COL6A1-202ENST00000463060 RARBP10826 455 aa16.02■□□□□ 0.16
COL6A1-202ENST00000463060 CST5P28325 142 aaPredicted RBP16.02■□□□□ 0.16
COL6A1-202ENST00000463060 SLC26A2P50443 739 aa16.02■□□□□ 0.16
COL6A1-202ENST00000463060 DGKDQ16760 1214 aa16.02■□□□□ 0.16
COL6A1-202ENST00000463060 XKR3Q5GH77 459 aa16.02■□□□□ 0.16
COL6A1-202ENST00000463060 CCDC183Q5T5S1 534 aa16.02■□□□□ 0.16
COL6A1-202ENST00000463060 UTP14CQ5TAP6 766 aaKnown RBP16.02■□□□□ 0.16
COL6A1-202ENST00000463060 FAM160B1Q5W0V3 765 aa16.02■□□□□ 0.16
COL6A1-202ENST00000463060 SV2BQ7L1I2 683 aa16.02■□□□□ 0.16
COL6A1-202ENST00000463060 TRIM50Q86XT4 487 aa16.02■□□□□ 0.16
COL6A1-202ENST00000463060 GRAMD1CQ8IYS0 662 aa16.02■□□□□ 0.16
COL6A1-202ENST00000463060 CEP57L1Q8IYX8 460 aa16.02■□□□□ 0.16
COL6A1-202ENST00000463060 RASSF8Q8NHQ8 419 aa16.02■□□□□ 0.16
COL6A1-202ENST00000463060 KAT2BQ92831 832 aa16.02■□□□□ 0.16
COL6A1-202ENST00000463060 C7orf25Q9BPX7 421 aa16.02■□□□□ 0.16
COL6A1-202ENST00000463060 NIFKQ9BYG3 293 aaKnown RBP16.02■□□□□ 0.16
COL6A1-202ENST00000463060 TNMDQ9H2S6 317 aa16.02■□□□□ 0.16
COL6A1-202ENST00000463060 MYADML2A6NDP7 307 aa16.01■□□□□ 0.15
COL6A1-202ENST00000463060 MYMKA6NI61 221 aa16.01■□□□□ 0.15
COL6A1-202ENST00000463060 MSCO60682 206 aa16.01■□□□□ 0.15
COL6A1-202ENST00000463060 CYP11B2P19099 503 aa16.01■□□□□ 0.15
COL6A1-202ENST00000463060 YWHABP31946 246 aaKnown RBP16.01■□□□□ 0.15
COL6A1-202ENST00000463060 SARSP49591 514 aaKnown RBP16.01■□□□□ 0.15
COL6A1-202ENST00000463060 RARRES1P49788 294 aa16.01■□□□□ 0.15
COL6A1-202ENST00000463060 CPT1AP50416 773 aa16.01■□□□□ 0.15
COL6A1-202ENST00000463060 BEX3Q00994 111 aa16.01■□□□□ 0.15
COL6A1-202ENST00000463060 PRKCEQ02156 737 aa16.01■□□□□ 0.15
COL6A1-202ENST00000463060 DPYDQ12882 1025 aa16.01■□□□□ 0.15
COL6A1-202ENST00000463060 PLCB4Q15147 1175 aa16.01■□□□□ 0.15
COL6A1-202ENST00000463060 TARBP2Q15633 366 aaKnown RBP16.01■□□□□ 0.15
COL6A1-202ENST00000463060 CAMK4Q16566 473 aa16.01■□□□□ 0.15
COL6A1-202ENST00000463060 FSCN1Q16658 493 aaKnown RBP16.01■□□□□ 0.15
COL6A1-202ENST00000463060 STAMQ92783 540 aa16.01■□□□□ 0.15
COL6A1-202ENST00000463060 DNAJC19Q96DA6 116 aa16.01■□□□□ 0.15
COL6A1-202ENST00000463060 NUP62CLQ9H1M0 184 aa16.01■□□□□ 0.15
COL6A1-202ENST00000463060 BHMT2Q9H2M3 363 aa16.01■□□□□ 0.15
COL6A1-202ENST00000463060 RNPEPQ9H4A4 650 aa16.01■□□□□ 0.15
COL6A1-202ENST00000463060 AZI2Q9H6S1 392 aa16.01■□□□□ 0.15
COL6A1-202ENST00000463060 PAK6Q9NQU5 681 aaPredicted RBP16.01■□□□□ 0.15
COL6A1-202ENST00000463060 PRDM10Q9NQV6 1147 aa16.01■□□□□ 0.15
COL6A1-202ENST00000463060 PDLIM7Q9NR12 457 aa16.01■□□□□ 0.15
COL6A1-202ENST00000463060 TMEM150BA6NC51 233 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 ZBTB42B2RXF5 422 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 H3BRB1 525 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 HAS3O00219 553 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 GTPBP6O43824 516 aaPredicted RBP16■□□□□ 0.15
COL6A1-202ENST00000463060 KPNA6O60684 536 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 PGK1P00558 417 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 OATP04181 439 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 MYL1P05976 194 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 PRR29P0C7W0 189 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 AFMP43652 599 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 POSTNQ15063 836 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 MTFR1Q15390 333 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 SLC9C1Q4G0N8 1177 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 NT5DC1Q5TFE4 455 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 RINT1Q6NUQ1 792 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 C1orf186Q6ZWK4 172 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 OTUD6AQ7L8S5 288 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 ATP8B4Q8TF62 1192 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 GLG1Q92896 1179 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 ARMC5Q96C12 935 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 TRIM9Q9C026 710 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 XRN2Q9H0D6 950 aaKnown RBP eCLIP16■□□□□ 0.15
COL6A1-202ENST00000463060 UNC93B1Q9H1C4 597 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 TUT1Q9H6E5 874 aaKnown RBP16■□□□□ 0.15
COL6A1-202ENST00000463060 XPNPEP3Q9NQH7 507 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 NRBP2Q9NSY0 501 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 ERAP1Q9NZ08 941 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 TUBE1Q9UJT0 475 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 CENPFP49454 3210 aa16■□□□□ 0.15
COL6A1-202ENST00000463060 F2P00734 622 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms