RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 RNF207Q6ZRF8 634 aa17.02■□□□□ 0.31
SMC4-204ENST00000462787 ADSSL1Q8N142 457 aa17.02■□□□□ 0.31
SMC4-204ENST00000462787 PIP4K2CQ8TBX8 421 aa17.02■□□□□ 0.31
SMC4-204ENST00000462787 MAML1Q92585 1016 aa17.02■□□□□ 0.31
SMC4-204ENST00000462787 PRMT1Q99873 361 aaKnown RBP17.02■□□□□ 0.31
SMC4-204ENST00000462787 SASH3O75995 380 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 TRIM65Q6PJ69 517 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 GFM2Q969S9 779 aaKnown RBP17.01■□□□□ 0.31
SMC4-204ENST00000462787 AMACRQ9UHK6 382 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 CFBP00751 764 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 STMN1P16949 149 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 ORC2Q13416 577 aaPredicted RBP17.01■□□□□ 0.31
SMC4-204ENST00000462787 KRT81Q14533 505 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 TBC1D22AQ8WUA7 517 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 ACSBG1Q96GR2 724 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 ISCUQ9H1K1 167 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 TMEM2Q9UHN6 1383 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 TCP11X1B4DZS4 312 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 GIPC1O14908 333 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 PRPF6O94906 941 aaKnown RBP17.01■□□□□ 0.31
SMC4-204ENST00000462787 SLC12A2P55011 1212 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 CHRNDQ07001 517 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 LRRC14Q15048 493 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 MORC4Q8TE76 937 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 TRAIPQ9BWF2 469 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 CCDC87Q9NVE4 849 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 CFAP65Q6ZU64 1925 aaKnown RBP17.01■□□□□ 0.31
SMC4-204ENST00000462787 A0A1W2PQJ5 194 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 CLIC2O15247 247 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 UFL1O94874 794 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 CARSP49589 748 aaKnown RBP17.01■□□□□ 0.31
SMC4-204ENST00000462787 SLC17A8Q8NDX2 589 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 NSMCE1Q8WV22 266 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 UBE2TQ9NPD8 197 aaPredicted RBP17.01■□□□□ 0.31
SMC4-204ENST00000462787 TRPC6Q9Y210 931 aa17.01■□□□□ 0.31
SMC4-204ENST00000462787 H0YCG3 227 aa17■□□□□ 0.31
SMC4-204ENST00000462787 CTDNEP1O95476 244 aa17■□□□□ 0.31
SMC4-204ENST00000462787 MDM2Q00987 491 aaPredicted RBP17■□□□□ 0.31
SMC4-204ENST00000462787 RBM26Q5T8P6 1007 aaKnown RBP17■□□□□ 0.31
SMC4-204ENST00000462787 CDAN1Q8IWY9 1227 aa17■□□□□ 0.31
SMC4-204ENST00000462787 ANXA13P27216 316 aa17■□□□□ 0.31
SMC4-204ENST00000462787 CACNB1Q02641 598 aaPredicted RBP17■□□□□ 0.31
SMC4-204ENST00000462787 ZNF354CQ86Y25 554 aa17■□□□□ 0.31
SMC4-204ENST00000462787 CCDC127Q96BQ5 260 aa17■□□□□ 0.31
SMC4-204ENST00000462787 PAPD7Q5XG87 772 aaKnown RBP17■□□□□ 0.31
SMC4-204ENST00000462787 CRLF3Q8IUI8 442 aa17■□□□□ 0.31
SMC4-204ENST00000462787 PYROXD1Q8WU10 500 aa17■□□□□ 0.31
SMC4-204ENST00000462787 SAYSD1Q9NPB0 183 aa17■□□□□ 0.31
SMC4-204ENST00000462787 DNAJC17Q9NVM6 304 aaKnown RBP17■□□□□ 0.31
SMC4-204ENST00000462787 PPARGC1AQ9UBK2 798 aaKnown RBP17■□□□□ 0.31
SMC4-204ENST00000462787 ARHGEF40Q8TER5 1519 aa17■□□□□ 0.31
SMC4-204ENST00000462787 FDPSP14324 419 aaKnown RBP16.99■□□□□ 0.31
SMC4-204ENST00000462787 MCAMP43121 646 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 MMEL1Q495T6 779 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 C1orf146Q5VVC0 180 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 MS4A14Q96JA4 679 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 MLXIPLQ9NP71 852 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 MAD1L1Q9Y6D9 718 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 NCAPD2Q15021 1401 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 EIF4E1BA6NMX2 242 aaKnown RBP16.99■□□□□ 0.31
SMC4-204ENST00000462787 PDE1BQ01064 536 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 CYP4A11Q02928 519 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 TTBK2Q6IQ55 1244 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 CCDC68Q9H2F9 335 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 ABCC3O15438 1527 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 TTC4O95801 387 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 PRLRP16471 622 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 KCNH2Q12809 1159 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 DDB1Q16531 1140 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 NBPF20Q3BBV1 942 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 DGKHQ86XP1 1220 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 LRRN4CLQ8ND94 238 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 ZMAT2Q96NC0 199 aaKnown RBP16.99■□□□□ 0.31
SMC4-204ENST00000462787 MAP2K7O14733 419 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 ACTN1P12814 892 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 TMOD1P28289 359 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 ARFIP2P53365 341 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 SLC18A3Q16572 532 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 ATP6V0A4Q9HBG4 840 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 ZNF609O15014 1411 aa16.99■□□□□ 0.31
SMC4-204ENST00000462787 RPS8P62241 208 aaKnown RBP16.98■□□□□ 0.31
SMC4-204ENST00000462787 GPC5P78333 572 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 SP4Q02446 784 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 RPS6KA2Q15349 733 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 GPATCH4Q5T3I0 446 aaKnown RBP16.98■□□□□ 0.31
SMC4-204ENST00000462787 RINT1Q6NUQ1 792 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 PDIK1LQ8N165 341 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 DNAJC9Q8WXX5 260 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 FAM96AQ9H5X1 160 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 TMEM206Q9H813 350 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 GGA1Q9UJY5 639 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 METP08581 1390 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 FOXP2O15409 715 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 KRT1P04264 644 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 TMEM154Q6P9G4 183 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 DNAJC12Q9UKB3 198 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 PNMA2Q9UL42 364 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 H7C0C1 242 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 ATP5OP48047 213 aa16.98■□□□□ 0.31
SMC4-204ENST00000462787 TMED8Q6PL24 325 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms