RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 ARMCX3Q9UH62 379 aaPredicted RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 ADAMTS1Q9UHI8 967 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 NARFQ9UHQ1 456 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 RASAL2Q9UJF2 1139 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 TMEM59LQ9UK28 342 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 FBXL5Q9UKA1 691 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 HDAC9Q9UKV0 1011 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 PACSIN2Q9UNF0 486 aaPredicted RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 KIAA1024Q9UPX6 916 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 DAAM1Q9Y4D1 1078 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 SPATA31A1Q5TZJ5 1347 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 PITPNM2Q9BZ72 1349 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 IRS2Q9Y4H2 1338 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 SCN7AQ01118 1682 aa3.84□□□□□ -1.8
COL8A1-204ENST00000462604 COL14A1Q05707 1796 aaKnown RBP3.84□□□□□ -1.8
COL8A1-204ENST00000462604 ANKRD36CQ5JPF3 1778 aa3.84□□□□□ -1.8
COL8A1-204ENST00000462604 MYO5AQ9Y4I1 1855 aaKnown RBP3.84□□□□□ -1.8
COL8A1-204ENST00000462604 AKAP11Q9UKA4 1901 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 NPHP3-ACAD11A0A0J9YXS1 232 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 POTEB3A0JP26 581 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 FRMD3A2A2Y4 597 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 C5orf60A6NFR6 353 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 CCDC169A6NNP5 214 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 POTECB2RU33 542 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 BHMG1C9JSJ3 638 aaPredicted RBP3.83□□□□□ -1.8
COL8A1-204ENST00000462604 E9PMD0 336 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 F8VZ95 297 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 H0YGN5 161 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 MYO1FO00160 1098 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 ZBTB5O15062 677 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 SART1O43290 800 aaKnown RBP3.83□□□□□ -1.8
COL8A1-204ENST00000462604 TRAPPC3O43617 180 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 UFL1O94874 794 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 TTLL1O95922 423 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 HLA-DOAP06340 250 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 TMEM253P0C7T8 217 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 SNHG28P0DPA3 235 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 GHRP10912 638 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 ACTN1P12814 892 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 EZRP15311 586 aaKnown RBP3.83□□□□□ -1.8
COL8A1-204ENST00000462604 UCHL3P15374 230 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 HSPA6P17066 643 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 GAP43P17677 238 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 CYP11B2P19099 503 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 ERCC3P19447 782 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 LMNB1P20700 586 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 ATP2B4P23634 1241 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 NF2P35240 595 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 PRKCIP41743 596 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 STAT1P42224 750 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 CLK2P49760 499 aaKnown RBP3.83□□□□□ -1.8
COL8A1-204ENST00000462604 RNASE9P60153 205 aaKnown RBP3.83□□□□□ -1.8
COL8A1-204ENST00000462604 DR1Q01658 176 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 CACNB1Q02641 598 aaPredicted RBP3.83□□□□□ -1.8
COL8A1-204ENST00000462604 DHX9Q08211 1270 aaKnown RBP3.83□□□□□ -1.8
COL8A1-204ENST00000462604 ZNF543Q08ER8 600 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 AP3B2Q13367 1082 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 NEDD9Q14511 834 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 SNCBQ16143 134 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 UAP1Q16222 522 aaPredicted RBP3.83□□□□□ -1.8
COL8A1-204ENST00000462604 KNOP1Q1ED39 458 aaKnown RBP3.83□□□□□ -1.8
COL8A1-204ENST00000462604 ANKRD20A8PQ5CZ79 823 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 RC3H1Q5TC82 1133 aaKnown RBP3.83□□□□□ -1.8
COL8A1-204ENST00000462604 GKAP1Q5VSY0 366 aaPredicted RBP3.83□□□□□ -1.8
COL8A1-204ENST00000462604 TCERG1LQ5VWI1 586 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 DENND2CQ68D51 928 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 MSL1Q68DK7 614 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 ALKBH5Q6P6C2 394 aaKnown RBP3.83□□□□□ -1.8
COL8A1-204ENST00000462604 KCNV1Q6PIU1 500 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 POTEBQ6S5H4 581 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 MOXD1Q6UVY6 613 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 STXBP4Q6ZWJ1 553 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 ZNF571Q7Z3V5 609 aaPredicted RBP3.83□□□□□ -1.8
COL8A1-204ENST00000462604 TMC3Q7Z5M5 1100 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 CPLX4Q7Z7G2 160 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 DAAM2Q86T65 1068 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 PARP9Q8IXQ6 854 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 ADGRF4Q8IZF3 695 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 RASGEF1CQ8N431 466 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 GPATCH11Q8N954 259 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 GLIS3Q8NEA6 775 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 TPCN2Q8NHX9 752 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 NEK9Q8TD19 979 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 U2AF1L4Q8WU68 220 aaKnown RBP3.83□□□□□ -1.8
COL8A1-204ENST00000462604 SCFD2Q8WU76 684 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 TBC1D22AQ8WUA7 517 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 SCFD1Q8WVM8 642 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 CTNNBL1Q8WYA6 563 aaPredicted RBP3.83□□□□□ -1.8
COL8A1-204ENST00000462604 RFFLQ8WZ73 363 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 HAS1Q92839 578 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 FAM163AQ96GL9 167 aaPredicted RBP3.83□□□□□ -1.8
COL8A1-204ENST00000462604 PSMD1Q99460 953 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 FMO2Q99518 471 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 NUDT12Q9BQG2 462 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 AP1M1Q9BXS5 423 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 KCTD10Q9H3F6 313 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 PSTPIP2Q9H939 334 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 SLC40A1Q9NP59 571 aa3.83□□□□□ -1.8
COL8A1-204ENST00000462604 TYW1Q9NV66 732 aaKnown RBP3.83□□□□□ -1.8
COL8A1-204ENST00000462604 GCNT4Q9P109 453 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms