RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 KCNJ14Q9UNX9 436 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 AKT3Q9Y243 479 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 TRPV2Q9Y5S1 764 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 KIAA1217Q5T5P2 1943 aa10.09□□□□□ -0.79
DDX39B-216ENST00000462421 STAG3L1P0CL83 205 aa10.08□□□□□ -0.8
DDX39B-216ENST00000462421 MRPS6P82932 125 aaKnown RBP10.08□□□□□ -0.8
DDX39B-216ENST00000462421 CDC42EP1Q00587 391 aa10.08□□□□□ -0.8
DDX39B-216ENST00000462421 TBC1D8BQ0IIM8 1120 aa10.08□□□□□ -0.8
DDX39B-216ENST00000462421 ITGB3BPQ13352 177 aaPredicted RBP10.08□□□□□ -0.8
DDX39B-216ENST00000462421 PLCB4Q15147 1175 aa10.08□□□□□ -0.8
DDX39B-216ENST00000462421 SKIV2LQ15477 1246 aaKnown RBP10.08□□□□□ -0.8
DDX39B-216ENST00000462421 HERC6Q8IVU3 1022 aa10.08□□□□□ -0.8
DDX39B-216ENST00000462421 CCDC83Q8IWF9 413 aa10.08□□□□□ -0.8
DDX39B-216ENST00000462421 MICALL1Q8N3F8 863 aa10.08□□□□□ -0.8
DDX39B-216ENST00000462421 MAFAQ8NHW3 353 aaPredicted RBP10.08□□□□□ -0.8
DDX39B-216ENST00000462421 DNAJB3Q8WWF6 145 aa10.08□□□□□ -0.8
DDX39B-216ENST00000462421 FAM20AQ96MK3 541 aa10.08□□□□□ -0.8
DDX39B-216ENST00000462421 UIMC1Q96RL1 719 aa10.08□□□□□ -0.8
DDX39B-216ENST00000462421 LLPHQ9BRT6 129 aaKnown RBP10.08□□□□□ -0.8
DDX39B-216ENST00000462421 PHF20Q9BVI0 1012 aa10.08□□□□□ -0.8
DDX39B-216ENST00000462421 CXXC1Q9P0U4 656 aaPredicted RBP10.08□□□□□ -0.8
DDX39B-216ENST00000462421 SEPT9Q9UHD8 586 aaPredicted RBP10.08□□□□□ -0.8
DDX39B-216ENST00000462421 INSL6Q9Y581 213 aa10.08□□□□□ -0.8
DDX39B-216ENST00000462421 PCDHA2Q9Y5H9 948 aa10.08□□□□□ -0.8
DDX39B-216ENST00000462421 SMIM35A0A1B0GVV1 85 aa10.07□□□□□ -0.8
DDX39B-216ENST00000462421 DENND3A2RUS2 1198 aa10.07□□□□□ -0.8
DDX39B-216ENST00000462421 GRXCR1A8MXD5 290 aa10.07□□□□□ -0.8
DDX39B-216ENST00000462421 H3BQV1 296 aa10.07□□□□□ -0.8
DDX39B-216ENST00000462421 MSH4O15457 936 aa10.07□□□□□ -0.8
DDX39B-216ENST00000462421 CXCL10P02778 98 aa10.07□□□□□ -0.8
DDX39B-216ENST00000462421 OATP04181 439 aa10.07□□□□□ -0.8
DDX39B-216ENST00000462421 GHRP10912 638 aa10.07□□□□□ -0.8
DDX39B-216ENST00000462421 IBSPP21815 317 aaPredicted RBP10.07□□□□□ -0.8
DDX39B-216ENST00000462421 RABGGTBP53611 331 aa10.07□□□□□ -0.8
DDX39B-216ENST00000462421 WDR5P61964 334 aaKnown RBP10.07□□□□□ -0.8
DDX39B-216ENST00000462421 ME3Q16798 604 aa10.07□□□□□ -0.8
DDX39B-216ENST00000462421 TMEM266Q2M3C6 531 aa10.07□□□□□ -0.8
DDX39B-216ENST00000462421 PPP4R3AQ6IN85 833 aa10.07□□□□□ -0.8
DDX39B-216ENST00000462421 FAM117BQ6P1L5 589 aa10.07□□□□□ -0.8
DDX39B-216ENST00000462421 MTHFD1LQ6UB35 978 aa10.07□□□□□ -0.8
DDX39B-216ENST00000462421 TSHZ1Q6ZSZ6 1077 aa10.07□□□□□ -0.8
DDX39B-216ENST00000462421 C16orf59Q7L2K0 433 aa10.07□□□□□ -0.8
DDX39B-216ENST00000462421 OTUD6AQ7L8S5 288 aa10.07□□□□□ -0.8
DDX39B-216ENST00000462421 DBF4BQ8NFT6 615 aa10.07□□□□□ -0.8
DDX39B-216ENST00000462421 MYLIPQ8WY64 445 aa10.07□□□□□ -0.8
DDX39B-216ENST00000462421 DHX38Q92620 1227 aaKnown RBP10.07□□□□□ -0.8
DDX39B-216ENST00000462421 CDX2Q99626 313 aaPredicted RBP10.07□□□□□ -0.8
DDX39B-216ENST00000462421 RAD9AQ99638 391 aa10.07□□□□□ -0.8
DDX39B-216ENST00000462421 CDY2AQ9Y6F7 541 aa10.07□□□□□ -0.8
DDX39B-216ENST00000462421 SCN10AQ9Y5Y9 1956 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 IGLV3-22A0A075B6J6 115 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 TBX3O15119 743 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 GPR182O15218 404 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 NEMFO60524 1076 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 NBNO60934 754 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 UPP2O95045 317 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 TDP2O95551 362 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 MMP1P03956 469 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 CA3P07451 260 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 ZSCAN20P17040 1043 aaPredicted RBP10.06□□□□□ -0.8
DDX39B-216ENST00000462421 KLRC1P26715 233 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 RBM25P49756 843 aaKnown RBP10.06□□□□□ -0.8
DDX39B-216ENST00000462421 PSMC5P62195 406 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 PRKCEQ02156 737 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 CALCRLQ16602 461 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 RASIP1Q5U651 963 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 NCAPH2Q6IBW4 605 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 ABHD15Q6UXT9 468 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 RPAINQ86UA6 219 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 CCDC60Q8IWA6 550 aaPredicted RBP10.06□□□□□ -0.8
DDX39B-216ENST00000462421 DIS3L2Q8IYB7 885 aaKnown RBP10.06□□□□□ -0.8
DDX39B-216ENST00000462421 ERMNQ8TAM6 284 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 NLRP7Q8WX94 980 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 SLC7A3Q8WY07 619 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 ARNTL2Q8WYA1 636 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 SLC5A5Q92911 643 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 SAMD11Q96NU1 681 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 RAB34Q9BZG1 259 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 BCAS3Q9H6U6 928 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 RWDD3Q9Y3V2 267 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.06□□□□□ -0.8
DDX39B-216ENST00000462421 SQORQ9Y6N5 450 aa10.06□□□□□ -0.8
DDX39B-216ENST00000462421 CYP3A7-CYP3A51PA0A087WV96 503 aa10.05□□□□□ -0.8
DDX39B-216ENST00000462421 DDX11L8A8MPP1 907 aa10.05□□□□□ -0.8
DDX39B-216ENST00000462421 RPS6KA5O75582 802 aa10.05□□□□□ -0.8
DDX39B-216ENST00000462421 ATG7O95352 703 aa10.05□□□□□ -0.8
DDX39B-216ENST00000462421 ATP2B1P20020 1258 aa10.05□□□□□ -0.8
DDX39B-216ENST00000462421 CYP3A7P24462 503 aa10.05□□□□□ -0.8
DDX39B-216ENST00000462421 HOXC8P31273 242 aa10.05□□□□□ -0.8
DDX39B-216ENST00000462421 PBX2P40425 430 aa10.05□□□□□ -0.8
DDX39B-216ENST00000462421 NCBP1Q09161 790 aaKnown RBP10.05□□□□□ -0.8
DDX39B-216ENST00000462421 TMEM62Q0P6H9 643 aa10.05□□□□□ -0.8
DDX39B-216ENST00000462421 NFX1Q12986 1120 aaKnown RBP10.05□□□□□ -0.8
DDX39B-216ENST00000462421 PTPROQ16827 1216 aa10.05□□□□□ -0.8
DDX39B-216ENST00000462421 TRIM71Q2Q1W2 868 aaKnown RBP10.05□□□□□ -0.8
DDX39B-216ENST00000462421 MTERF2Q49AM1 385 aa10.05□□□□□ -0.8
DDX39B-216ENST00000462421 PLEKHG4Q58EX7 1191 aa10.05□□□□□ -0.8
DDX39B-216ENST00000462421 XKR3Q5GH77 459 aa10.05□□□□□ -0.8
DDX39B-216ENST00000462421 FAM26DQ5JW98 314 aa10.05□□□□□ -0.8
DDX39B-216ENST00000462421 SPOUT1Q5T280 376 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms