RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 MAN2B1O00754 1011 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 ABLIM1O14639 778 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 TADA3O75528 432 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 PRKD3O94806 890 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 PARNO95453 639 aaKnown RBP4.07□□□□□ -1.76
HDAC6-212ENST00000461608 NTRK1P04629 796 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 AMY2AP04746 511 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 DBHP09172 617 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 INSRRP14616 1297 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 AMY2BP19961 511 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 PDE6BP35913 854 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 EVA1CP58658 441 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 ERVFRD-1P60508 538 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 ADCY1Q08828 1119 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 PIN1Q13526 163 aaPredicted RBP4.07□□□□□ -1.76
HDAC6-212ENST00000461608 EPHA7Q15375 998 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 TERF2Q15554 542 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 NOL8Q76FK4 1167 aaKnown RBP4.07□□□□□ -1.76
HDAC6-212ENST00000461608 RASSF3Q86WH2 238 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 PTRH1Q86Y79 214 aaKnown RBP4.07□□□□□ -1.76
HDAC6-212ENST00000461608 ZNF610Q8N9Z0 462 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 DLG3Q92796 817 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 TSPAN17Q96FV3 270 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 AHCYL2Q96HN2 611 aaKnown RBP4.07□□□□□ -1.76
HDAC6-212ENST00000461608 ACAP3Q96P50 834 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 PLCD4Q9BRC7 762 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 WNT8AQ9H1J5 351 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 NGRNQ9NPE2 291 aaKnown RBP4.07□□□□□ -1.76
HDAC6-212ENST00000461608 ASH2LQ9UBL3 628 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 TRHDEQ9UKU6 1024 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 NKRFO15226 690 aaKnown RBP eCLIP4.06□□□□□ -1.76
HDAC6-212ENST00000461608 KRT37O76014 449 aa4.06□□□□□ -1.76
HDAC6-212ENST00000461608 MPOP05164 745 aa4.06□□□□□ -1.76
HDAC6-212ENST00000461608 ZBTB48P10074 688 aaPredicted RBP4.06□□□□□ -1.76
HDAC6-212ENST00000461608 PTPN1P18031 435 aaKnown RBP4.06□□□□□ -1.76
HDAC6-212ENST00000461608 VCAM1P19320 739 aa4.06□□□□□ -1.76
HDAC6-212ENST00000461608 TACR1P25103 407 aa4.06□□□□□ -1.76
HDAC6-212ENST00000461608 ID4P47928 161 aa4.06□□□□□ -1.76
HDAC6-212ENST00000461608 ERVK-21P61565 698 aa4.06□□□□□ -1.76
HDAC6-212ENST00000461608 SMAD3P84022 425 aaKnown RBP4.06□□□□□ -1.76
HDAC6-212ENST00000461608 MCL1Q07820 350 aa4.06□□□□□ -1.76
HDAC6-212ENST00000461608 KLF1Q13351 362 aaPredicted RBP4.06□□□□□ -1.76
HDAC6-212ENST00000461608 PPP2R5AQ15172 486 aa4.06□□□□□ -1.76
HDAC6-212ENST00000461608 SMAD2Q15796 467 aaKnown RBP4.06□□□□□ -1.76
HDAC6-212ENST00000461608 NFE2Q16621 373 aaPredicted RBP4.06□□□□□ -1.76
HDAC6-212ENST00000461608 FRMD7Q6ZUT3 714 aa4.06□□□□□ -1.76
HDAC6-212ENST00000461608 LHFPL2Q6ZUX7 228 aa4.06□□□□□ -1.76
HDAC6-212ENST00000461608 OSTM1Q86WC4 334 aa4.06□□□□□ -1.76
HDAC6-212ENST00000461608 CLRN3Q8NCR9 226 aa4.06□□□□□ -1.76
HDAC6-212ENST00000461608 SHISA4Q96DD7 197 aa4.06□□□□□ -1.76
HDAC6-212ENST00000461608 MAML3Q96JK9 1138 aa4.06□□□□□ -1.76
HDAC6-212ENST00000461608 C8orf48Q96LL4 319 aa4.06□□□□□ -1.76
HDAC6-212ENST00000461608 SMAD5Q99717 465 aaKnown RBP4.06□□□□□ -1.76
HDAC6-212ENST00000461608 SGPP1Q9BX95 441 aa4.06□□□□□ -1.76
HDAC6-212ENST00000461608 GCM1Q9NP62 436 aa4.06□□□□□ -1.76
HDAC6-212ENST00000461608 TOMM22Q9NS69 142 aa4.06□□□□□ -1.76
HDAC6-212ENST00000461608 HSPBP1Q9NZL4 362 aa4.06□□□□□ -1.76
HDAC6-212ENST00000461608 DBR1Q9UK59 544 aaKnown RBP4.06□□□□□ -1.76
HDAC6-212ENST00000461608 G3BP2Q9UN86 482 aaKnown RBP4.06□□□□□ -1.76
HDAC6-212ENST00000461608 MYRFQ9Y2G1 1151 aa4.06□□□□□ -1.76
HDAC6-212ENST00000461608 YBX2Q9Y2T7 364 aaKnown RBP4.06□□□□□ -1.76
HDAC6-212ENST00000461608 ASB1Q9Y576 335 aa4.06□□□□□ -1.76
HDAC6-212ENST00000461608 IRAK3Q9Y616 596 aa4.06□□□□□ -1.76
HDAC6-212ENST00000461608 EID1Q9Y6B2 187 aa4.06□□□□□ -1.76
HDAC6-212ENST00000461608 TEX51A0A1B0GUA7 166 aa4.05□□□□□ -1.76
HDAC6-212ENST00000461608 TCRBV5S4A2TA0A5A2 114 aa4.05□□□□□ -1.76
HDAC6-212ENST00000461608 TRIM75PA6NK02 468 aa4.05□□□□□ -1.76
HDAC6-212ENST00000461608 SCDO00767 359 aa4.05□□□□□ -1.76
HDAC6-212ENST00000461608 GABRDO14764 452 aa4.05□□□□□ -1.76
HDAC6-212ENST00000461608 MAFGO15525 162 aa4.05□□□□□ -1.76
HDAC6-212ENST00000461608 PPP1R11O60927 126 aaPredicted RBP4.05□□□□□ -1.76
HDAC6-212ENST00000461608 MSL3P1P0C860 447 aa4.05□□□□□ -1.76
HDAC6-212ENST00000461608 COL6A2P12110 1019 aa4.05□□□□□ -1.76
HDAC6-212ENST00000461608 MAPKAPK2P49137 400 aa4.05□□□□□ -1.76
HDAC6-212ENST00000461608 HLTFQ14527 1009 aaKnown RBP eCLIP4.05□□□□□ -1.76
HDAC6-212ENST00000461608 TMEM240Q5SV17 173 aa4.05□□□□□ -1.76
HDAC6-212ENST00000461608 BROXQ5VW32 411 aa4.05□□□□□ -1.76
HDAC6-212ENST00000461608 PHYKPLQ8IUZ5 450 aa4.05□□□□□ -1.76
HDAC6-212ENST00000461608 AMOTL1Q8IY63 956 aa4.05□□□□□ -1.76
HDAC6-212ENST00000461608 C7orf31Q8N865 590 aa4.05□□□□□ -1.76
HDAC6-212ENST00000461608 SH3RF2Q8TEC5 729 aa4.05□□□□□ -1.76
HDAC6-212ENST00000461608 COG1Q8WTW3 980 aa4.05□□□□□ -1.76
HDAC6-212ENST00000461608 ZDHHC5Q9C0B5 715 aa4.05□□□□□ -1.76
HDAC6-212ENST00000461608 CDH19Q9H159 772 aa4.05□□□□□ -1.76
HDAC6-212ENST00000461608 DTLQ9NZJ0 730 aa4.05□□□□□ -1.76
HDAC6-212ENST00000461608 THRAP3Q9Y2W1 955 aaKnown RBP4.05□□□□□ -1.76
HDAC6-212ENST00000461608 NOC2LQ9Y3T9 749 aaKnown RBP4.05□□□□□ -1.76
HDAC6-212ENST00000461608 MRFAP1Q9Y605 127 aa4.05□□□□□ -1.76
HDAC6-212ENST00000461608 TCRBV5S2A0A599 114 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 OR14I1A6ND48 311 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 PRAMEF25A6NGN4 478 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 OTOL1A6NHN0 477 aaPredicted RBP4.04□□□□□ -1.76
HDAC6-212ENST00000461608 SLC27A2O14975 620 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 FOXP2O15409 715 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 TGM5O43548 720 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 KDM1AO60341 852 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 BUB1BO60566 1050 aaPredicted RBP4.04□□□□□ -1.76
HDAC6-212ENST00000461608 TRIM13O60858 407 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 RFPL1O75677 317 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 AFF3P51826 1226 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms