RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 KRIT1O00522 736 aa16.9■□□□□ 0.3
SSR4-206ENST00000460616 ASAP2O43150 1006 aa16.9■□□□□ 0.3
SSR4-206ENST00000460616 IGHMBP2P38935 993 aaKnown RBP16.9■□□□□ 0.3
SSR4-206ENST00000460616 USP11P51784 963 aa16.9■□□□□ 0.3
SSR4-206ENST00000460616 DYNLL1P63167 89 aaKnown RBP16.9■□□□□ 0.3
SSR4-206ENST00000460616 TLCD1Q96CP7 247 aa16.9■□□□□ 0.3
SSR4-206ENST00000460616 ZNF317Q96PQ6 595 aaPredicted RBP16.9■□□□□ 0.3
SSR4-206ENST00000460616 SPAG5Q96R06 1193 aa16.9■□□□□ 0.3
SSR4-206ENST00000460616 AMACRQ9UHK6 382 aa16.9■□□□□ 0.3
SSR4-206ENST00000460616 KIAA1551Q9HCM1 1747 aa16.9■□□□□ 0.3
SSR4-206ENST00000460616 F8VZ95 297 aa16.9■□□□□ 0.3
SSR4-206ENST00000460616 PGRMC1O00264 195 aaKnown RBP16.9■□□□□ 0.3
SSR4-206ENST00000460616 OR52Z1P0C646 297 aa16.9■□□□□ 0.3
SSR4-206ENST00000460616 TECP42680 631 aa16.9■□□□□ 0.3
SSR4-206ENST00000460616 KLHL30Q0D2K2 578 aa16.9■□□□□ 0.3
SSR4-206ENST00000460616 SF3A3Q12874 501 aaKnown RBP eCLIP16.9■□□□□ 0.31e-16■□□□□ 8.2
SSR4-206ENST00000460616 ITIH4Q14624 930 aa16.9■□□□□ 0.3
SSR4-206ENST00000460616 KCTD19Q17RG1 926 aaPredicted RBP16.9■□□□□ 0.3
SSR4-206ENST00000460616 LRRC55Q6ZSA7 311 aa16.9■□□□□ 0.3
SSR4-206ENST00000460616 LMBR1Q8WVP7 490 aa16.9■□□□□ 0.3
SSR4-206ENST00000460616 SGIP1Q9BQI5 828 aa16.9■□□□□ 0.3
SSR4-206ENST00000460616 LRRC4CQ9HCJ2 640 aa16.9■□□□□ 0.3
SSR4-206ENST00000460616 DUOX1Q9NRD9 1551 aa16.89■□□□□ 0.29
SSR4-206ENST00000460616 DOCK2Q92608 1830 aa16.89■□□□□ 0.29
SSR4-206ENST00000460616 CFAP73A6NFT4 308 aa16.89■□□□□ 0.29
SSR4-206ENST00000460616 RPS8P62241 208 aaKnown RBP16.89■□□□□ 0.29
SSR4-206ENST00000460616 CHADLQ6NUI6 762 aa16.89■□□□□ 0.29
SSR4-206ENST00000460616 BZW1Q7L1Q6 419 aaKnown RBP16.89■□□□□ 0.29
SSR4-206ENST00000460616 PIGWQ7Z7B1 504 aa16.89■□□□□ 0.29
SSR4-206ENST00000460616 ZNF483Q8TF39 744 aaPredicted RBP16.89■□□□□ 0.29
SSR4-206ENST00000460616 CALML4Q96GE6 196 aa16.89■□□□□ 0.29
SSR4-206ENST00000460616 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.89■□□□□ 0.292e-8■□□□□ 8.3
SSR4-206ENST00000460616 PNMA2Q9UL42 364 aa16.89■□□□□ 0.29
SSR4-206ENST00000460616 TRPC6Q9Y210 931 aa16.89■□□□□ 0.29
SSR4-206ENST00000460616 DLEC1Q9Y238 1755 aa16.89■□□□□ 0.29
SSR4-206ENST00000460616 PVALEFA0A1B0GWK0 134 aa16.89■□□□□ 0.29
SSR4-206ENST00000460616 CCDC188H7C350 402 aa16.89■□□□□ 0.29
SSR4-206ENST00000460616 PTGER2P43116 358 aa16.89■□□□□ 0.29
SSR4-206ENST00000460616 EIF3BP55884 814 aaKnown RBP16.89■□□□□ 0.29
SSR4-206ENST00000460616 SARNPP82979 210 aaKnown RBP16.89■□□□□ 0.29
SSR4-206ENST00000460616 RAPGEF1Q13905 1077 aa16.89■□□□□ 0.29
SSR4-206ENST00000460616 UNC13DQ70J99 1090 aa16.89■□□□□ 0.29
SSR4-206ENST00000460616 DYMQ7RTS9 669 aa16.89■□□□□ 0.29
SSR4-206ENST00000460616 CCDC26Q8TAB7 109 aa16.89■□□□□ 0.29
SSR4-206ENST00000460616 LSM14BQ9BX40 385 aaKnown RBP16.89■□□□□ 0.29
SSR4-206ENST00000460616 PANK4Q9NVE7 773 aa16.89■□□□□ 0.29
SSR4-206ENST00000460616 SLX4Q8IY92 1834 aa16.89■□□□□ 0.29
SSR4-206ENST00000460616 CCNT1O60563 726 aaKnown RBP16.88■□□□□ 0.29
SSR4-206ENST00000460616 CAND2O75155 1236 aa16.88■□□□□ 0.29
SSR4-206ENST00000460616 MMEP08473 750 aa16.88■□□□□ 0.29
SSR4-206ENST00000460616 CHN1P15882 459 aa16.88■□□□□ 0.29
SSR4-206ENST00000460616 GRAPQ13588 217 aa16.88■□□□□ 0.29
SSR4-206ENST00000460616 FAM133BQ5BKY9 247 aaKnown RBP16.88■□□□□ 0.29
SSR4-206ENST00000460616 TMED8Q6PL24 325 aaPredicted RBP16.88■□□□□ 0.29
SSR4-206ENST00000460616 GRAPLQ8TC17 118 aaPredicted RBP16.88■□□□□ 0.29
SSR4-206ENST00000460616 TSG101Q99816 390 aa16.88■□□□□ 0.29
SSR4-206ENST00000460616 GOLPH3Q9H4A6 298 aa16.88■□□□□ 0.29
SSR4-206ENST00000460616 KCNG1Q9UIX4 513 aa16.88■□□□□ 0.29
SSR4-206ENST00000460616 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.88■□□□□ 0.29
SSR4-206ENST00000460616 NOC2LQ9Y3T9 749 aaKnown RBP16.88■□□□□ 0.29
SSR4-206ENST00000460616 MYMKA6NI61 221 aa16.88■□□□□ 0.29
SSR4-206ENST00000460616 PDE6BP35913 854 aa16.88■□□□□ 0.29
SSR4-206ENST00000460616 EVX2Q03828 476 aa16.88■□□□□ 0.29
SSR4-206ENST00000460616 CHRNDQ07001 517 aa16.88■□□□□ 0.29
SSR4-206ENST00000460616 ZNF268Q14587 947 aaPredicted RBP16.88■□□□□ 0.29
SSR4-206ENST00000460616 SLMAPQ14BN4 828 aa16.88■□□□□ 0.29
SSR4-206ENST00000460616 PTPROQ16827 1216 aa16.88■□□□□ 0.29
SSR4-206ENST00000460616 LETM2Q2VYF4 491 aa16.88■□□□□ 0.29
SSR4-206ENST00000460616 GALNT17Q6IS24 598 aa16.88■□□□□ 0.29
SSR4-206ENST00000460616 FAM133AQ8N9E0 248 aa16.88■□□□□ 0.29
SSR4-206ENST00000460616 MMTAG2Q9BU76 263 aaKnown RBP16.88■□□□□ 0.29
SSR4-206ENST00000460616 SAMD15Q9P1V8 674 aa16.88■□□□□ 0.29
SSR4-206ENST00000460616 ATP8A1Q9Y2Q0 1164 aa16.88■□□□□ 0.29
SSR4-206ENST00000460616 BTNL10A8MVZ5 291 aa16.87■□□□□ 0.29
SSR4-206ENST00000460616 TTI1O43156 1089 aa16.87■□□□□ 0.29
SSR4-206ENST00000460616 ITGA4P13612 1032 aa16.87■□□□□ 0.29
SSR4-206ENST00000460616 BRD2P25440 801 aaKnown RBP16.87■□□□□ 0.29
SSR4-206ENST00000460616 IFI16Q16666 785 aaKnown RBP16.87■□□□□ 0.29
SSR4-206ENST00000460616 TRPM8Q7Z2W7 1104 aa16.87■□□□□ 0.29
SSR4-206ENST00000460616 HEATR3Q7Z4Q2 680 aa16.87■□□□□ 0.29
SSR4-206ENST00000460616 EGFL6Q8IUX8 553 aa16.87■□□□□ 0.29
SSR4-206ENST00000460616 METTL13Q8N6R0 699 aa16.87■□□□□ 0.29
SSR4-206ENST00000460616 DAGLBQ8NCG7 672 aa16.87■□□□□ 0.29
SSR4-206ENST00000460616 AGAP11Q8TF27 550 aa16.87■□□□□ 0.29
SSR4-206ENST00000460616 FAM114A2Q9NRY5 505 aa16.87■□□□□ 0.29
SSR4-206ENST00000460616 NOP53Q9NZM5 478 aaKnown RBP16.87■□□□□ 0.29
SSR4-206ENST00000460616 UTP11Q9Y3A2 253 aaKnown RBP16.87■□□□□ 0.29
SSR4-206ENST00000460616 COL4A3BPQ9Y5P4 624 aa16.87■□□□□ 0.29
SSR4-206ENST00000460616 LRRC41Q15345 812 aa16.87■□□□□ 0.29
SSR4-206ENST00000460616 HOOK3Q86VS8 718 aa16.87■□□□□ 0.29
SSR4-206ENST00000460616 DHX37Q8IY37 1157 aaKnown RBP16.87■□□□□ 0.29
SSR4-206ENST00000460616 RBM17Q96I25 401 aaKnown RBP16.87■□□□□ 0.29
SSR4-206ENST00000460616 L3MBTL3Q96JM7 780 aaPredicted RBP16.87■□□□□ 0.29
SSR4-206ENST00000460616 ELAC2Q9BQ52 826 aaKnown RBP16.87■□□□□ 0.29
SSR4-206ENST00000460616 DPH5Q9H2P9 285 aa16.87■□□□□ 0.29
SSR4-206ENST00000460616 SLITRK6Q9H5Y7 841 aa16.87■□□□□ 0.29
SSR4-206ENST00000460616 KIF9Q9HAQ2 790 aa16.87■□□□□ 0.29
SSR4-206ENST00000460616 RIC8AQ9NPQ8 531 aa16.87■□□□□ 0.29
SSR4-206ENST00000460616 SPATS2LQ9NUQ6 558 aaKnown RBP16.87■□□□□ 0.29
SSR4-206ENST00000460616 BSDC1Q9NW68 430 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms