RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 MC4RP32245 332 aa6.52□□□□□ -1.37
VBP1-202ENST00000460509 GUCY2FP51841 1108 aa6.52□□□□□ -1.37
VBP1-202ENST00000460509 HERVK_113P62684 666 aa6.52□□□□□ -1.37
VBP1-202ENST00000460509 SKIDA1Q1XH10 827 aa6.52□□□□□ -1.37
VBP1-202ENST00000460509 BROXQ5VW32 411 aa6.52□□□□□ -1.37
VBP1-202ENST00000460509 OGFOD2Q6N063 350 aa6.52□□□□□ -1.37
VBP1-202ENST00000460509 SPATS2Q86XZ4 545 aaKnown RBP6.52□□□□□ -1.37
VBP1-202ENST00000460509 WDR48Q8TAF3 677 aa6.52□□□□□ -1.37
VBP1-202ENST00000460509 COG1Q8WTW3 980 aa6.52□□□□□ -1.37
VBP1-202ENST00000460509 RTF1Q92541 710 aaKnown RBP6.52□□□□□ -1.37
VBP1-202ENST00000460509 SLC5A5Q92911 643 aa6.52□□□□□ -1.37
VBP1-202ENST00000460509 ZBTB8AQ96BR9 441 aa6.52□□□□□ -1.37
VBP1-202ENST00000460509 SCYL1Q96KG9 808 aa6.52□□□□□ -1.37
VBP1-202ENST00000460509 NOX5Q96PH1 765 aa6.52□□□□□ -1.37
VBP1-202ENST00000460509 PDGFDQ9GZP0 370 aaPredicted RBP6.52□□□□□ -1.37
VBP1-202ENST00000460509 SLC5A4Q9NY91 659 aa6.52□□□□□ -1.37
VBP1-202ENST00000460509 NOC2LQ9Y3T9 749 aaKnown RBP6.52□□□□□ -1.37
VBP1-202ENST00000460509 PMF1-BGLAPU3KQ54 211 aa6.52□□□□□ -1.37
VBP1-202ENST00000460509 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.51□□□□□ -1.37
VBP1-202ENST00000460509 ZNF839A8K0R7 811 aa6.51□□□□□ -1.37
VBP1-202ENST00000460509 ULK1O75385 1050 aa6.51□□□□□ -1.37
VBP1-202ENST00000460509 FBXO21O94952 628 aa6.51□□□□□ -1.37
VBP1-202ENST00000460509 APOL3O95236 402 aa6.51□□□□□ -1.37
VBP1-202ENST00000460509 C1QTNF9P0C862 333 aa6.51□□□□□ -1.37
VBP1-202ENST00000460509 PI3P19957 117 aa6.51□□□□□ -1.37
VBP1-202ENST00000460509 PTGS1P23219 599 aa6.51□□□□□ -1.37
VBP1-202ENST00000460509 GLDCP23378 1020 aa6.51□□□□□ -1.37
VBP1-202ENST00000460509 IGFBP6P24592 240 aaPredicted RBP6.51□□□□□ -1.37
VBP1-202ENST00000460509 AOAHP28039 575 aa6.51□□□□□ -1.37
VBP1-202ENST00000460509 LSP1P33241 339 aa6.51□□□□□ -1.37
VBP1-202ENST00000460509 ITGA1P56199 1179 aa6.51□□□□□ -1.37
VBP1-202ENST00000460509 CNKSR3Q6P9H4 555 aa6.51□□□□□ -1.37
VBP1-202ENST00000460509 PROSER1Q86XN7 944 aa6.51□□□□□ -1.37
VBP1-202ENST00000460509 CLIC6Q96NY7 704 aa6.51□□□□□ -1.37
VBP1-202ENST00000460509 TUBGCP5Q96RT8 1024 aa6.51□□□□□ -1.37
VBP1-202ENST00000460509 TMEM209Q96SK2 561 aa6.51□□□□□ -1.37
VBP1-202ENST00000460509 PPP1R16BQ96T49 567 aa6.51□□□□□ -1.37
VBP1-202ENST00000460509 MS4A5Q9H3V2 200 aa6.51□□□□□ -1.37
VBP1-202ENST00000460509 HOMER2Q9NSB8 354 aa6.51□□□□□ -1.37
VBP1-202ENST00000460509 ARHGAP20Q9P2F6 1191 aa6.51□□□□□ -1.37
VBP1-202ENST00000460509 SMG5Q9UPR3 1016 aaKnown RBP6.51□□□□□ -1.37
VBP1-202ENST00000460509 WASF3Q9UPY6 502 aa6.51□□□□□ -1.37
VBP1-202ENST00000460509 UBA6A0AVT1 1052 aaPredicted RBP6.5□□□□□ -1.37
VBP1-202ENST00000460509 LCHNA4D1U4 455 aa6.5□□□□□ -1.37
VBP1-202ENST00000460509 CD40P25942 277 aa6.5□□□□□ -1.37
VBP1-202ENST00000460509 FNTBP49356 437 aa6.5□□□□□ -1.37
VBP1-202ENST00000460509 SMAD3P84022 425 aaKnown RBP6.5□□□□□ -1.37
VBP1-202ENST00000460509 ITKQ08881 620 aa6.5□□□□□ -1.37
VBP1-202ENST00000460509 SSPNQ14714 243 aa6.5□□□□□ -1.37
VBP1-202ENST00000460509 SMAD2Q15796 467 aaKnown RBP6.5□□□□□ -1.37
VBP1-202ENST00000460509 PKN1Q16512 942 aa6.5□□□□□ -1.37
VBP1-202ENST00000460509 ESRP1Q6NXG1 681 aaKnown RBP6.5□□□□□ -1.37
VBP1-202ENST00000460509 CILP2Q8IUL8 1156 aa6.5□□□□□ -1.37
VBP1-202ENST00000460509 ZZZ3Q8IYH5 903 aa6.5□□□□□ -1.37
VBP1-202ENST00000460509 TMEFF1Q8IYR6 380 aa6.5□□□□□ -1.37
VBP1-202ENST00000460509 IGDCC4Q8TDY8 1250 aa6.5□□□□□ -1.37
VBP1-202ENST00000460509 PWWP2AQ96N64 755 aa6.5□□□□□ -1.37
VBP1-202ENST00000460509 TACO1Q9BSH4 297 aaKnown RBP6.5□□□□□ -1.37
VBP1-202ENST00000460509 C11orf84Q9BUA3 381 aaPredicted RBP6.5□□□□□ -1.37
VBP1-202ENST00000460509 KRTAP4-9Q9BYQ8 210 aa6.5□□□□□ -1.37
VBP1-202ENST00000460509 PCDH18Q9HCL0 1135 aa6.5□□□□□ -1.37
VBP1-202ENST00000460509 INCENPQ9NQS7 918 aa6.5□□□□□ -1.37
VBP1-202ENST00000460509 DLL4Q9NR61 685 aa6.5□□□□□ -1.37
VBP1-202ENST00000460509 BTBD7Q9P203 1132 aa6.5□□□□□ -1.37
VBP1-202ENST00000460509 ASB1Q9Y576 335 aa6.5□□□□□ -1.37
VBP1-202ENST00000460509 KCTD3Q9Y597 815 aa6.5□□□□□ -1.37
VBP1-202ENST00000460509 GOLGA6L22H0YM25 854 aa6.49□□□□□ -1.37
VBP1-202ENST00000460509 KATNA1O75449 491 aa6.49□□□□□ -1.37
VBP1-202ENST00000460509 SLC6A3Q01959 620 aa6.49□□□□□ -1.37
VBP1-202ENST00000460509 TERF2Q15554 542 aa6.49□□□□□ -1.37
VBP1-202ENST00000460509 PRAMEF9Q5VWM5 478 aa6.49□□□□□ -1.37
VBP1-202ENST00000460509 LRSAM1Q6UWE0 723 aa6.49□□□□□ -1.37
VBP1-202ENST00000460509 FAM129CQ86XR2 697 aa6.49□□□□□ -1.37
VBP1-202ENST00000460509 C7orf31Q8N865 590 aa6.49□□□□□ -1.37
VBP1-202ENST00000460509 KYQ8NBH2 561 aa6.49□□□□□ -1.37
VBP1-202ENST00000460509 CLRN3Q8NCR9 226 aa6.49□□□□□ -1.37
VBP1-202ENST00000460509 E2F7Q96AV8 911 aa6.49□□□□□ -1.37
VBP1-202ENST00000460509 C16orf92Q96LL3 132 aa6.49□□□□□ -1.37
VBP1-202ENST00000460509 ZMAT4Q9H898 229 aa6.49□□□□□ -1.37
VBP1-202ENST00000460509 HSPBP1Q9NZL4 362 aa6.49□□□□□ -1.37
VBP1-202ENST00000460509 MSRAQ9UJ68 235 aa6.49□□□□□ -1.37
VBP1-202ENST00000460509 ZFP69BQ9UJL9 534 aa6.49□□□□□ -1.37
VBP1-202ENST00000460509 PHLDB1Q86UU1 1377 aa6.48□□□□□ -1.37
VBP1-202ENST00000460509 ALG1L2C9J202 215 aa6.48□□□□□ -1.37
VBP1-202ENST00000460509 RFXAPO00287 272 aa6.48□□□□□ -1.37
VBP1-202ENST00000460509 PLA2G1BP04054 148 aaKnown RBP6.48□□□□□ -1.37
VBP1-202ENST00000460509 RAP1GAPP47736 663 aa6.48□□□□□ -1.37
VBP1-202ENST00000460509 SESN3P58005 492 aa6.48□□□□□ -1.37
VBP1-202ENST00000460509 ADCY1Q08828 1119 aa6.48□□□□□ -1.37
VBP1-202ENST00000460509 ADAM9Q13443 819 aa6.48□□□□□ -1.37
VBP1-202ENST00000460509 FZD5Q13467 585 aa6.48□□□□□ -1.37
VBP1-202ENST00000460509 EPHA7Q15375 998 aa6.48□□□□□ -1.37
VBP1-202ENST00000460509 ZNF124Q15973 351 aa6.48□□□□□ -1.37
VBP1-202ENST00000460509 TTC38Q5R3I4 469 aa6.48□□□□□ -1.37
VBP1-202ENST00000460509 TIGD7Q6NT04 549 aaPredicted RBP6.48□□□□□ -1.37
VBP1-202ENST00000460509 FERMT3Q86UX7 667 aa6.48□□□□□ -1.37
VBP1-202ENST00000460509 NME9Q86XW9 330 aa6.48□□□□□ -1.37
VBP1-202ENST00000460509 RPUSD2Q8IZ73 545 aaKnown RBP6.48□□□□□ -1.37
VBP1-202ENST00000460509 STPG3Q8N7X2 389 aa6.48□□□□□ -1.37
VBP1-202ENST00000460509 TTLL6Q8N841 843 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms